Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.0e-79 297.0 144 100.0
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.7e-57 226.1 183 62.8
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.2e-54 214.5 170 62.9
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 9.8e-53 210.3 183 58.5
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 3.7e-52 208.4 183 59.6
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 4.3e-48 194.9 183 57.4
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 5.2e-46 188.0 187 54.5
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.3e-36 156.8 106 72.6
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 3.9e-33 145.2 133 57.9
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.4e-27 125.9 79 72.2
Nitab4.5_0000273g0210 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.2e-23 113.6 104 58.7
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.8e-22 109.8 183 35.5
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.7e-20 103.2 178 33.1
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.8e-20 102.1 179 31.8
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 4.2e-19 98.6 181 32.6
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 2.7e-18 95.9 161 33.5
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 7.8e-18 94.4 154 33.1
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.3e-17 93.6 161 33.5
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.3e-17 92.8 161 33.5
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 5.1e-17 91.7 179 31.8
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 6.6e-17 91.3 180 31.1
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 8.7e-17 90.9 177 32.8
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 8.7e-17 90.9 161 32.9
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 8.7e-17 90.9 153 33.3
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.1e-16 90.5 184 35.3
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 1.5e-16 90.1 154 33.8
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 1.5e-16 90.1 186 32.3
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 4.3e-16 88.6 195 31.3
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 7.3e-16 87.8 161 31.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.3e-15 87.0 181 31.5
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.3e-15 87.0 197 28.9
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.1e-15 86.3 162 32.7
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 4.8e-15 85.1 182 30.2
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 3.1e-14 82.4 99 41.4
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 3.1e-14 82.4 185 32.4
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 4.0e-14 82.0 184 29.9
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 5.3e-14 81.6 159 31.4
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.2e-13 80.5 154 31.2
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.5e-13 80.1 150 31.3
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 2.0e-13 79.7 185 30.8
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 2.6e-13 79.3 156 32.7
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.6e-13 79.3 164 31.1
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 3.4e-13 79.0 157 35.0
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 4.5e-13 78.6 181 30.9
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 5.8e-13 78.2 157 29.3
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 4.9e-12 75.1 180 29.4
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 6.4e-12 74.7 62 50.0
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 6.4e-12 74.7 175 32.6
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 2.4e-11 72.8 155 27.7
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 2.4e-11 72.8 183 29.0
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.4e-11 72.8 143 35.7
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 3.5e-10 68.9 180 32.2
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 3.5e-10 68.9 154 29.2
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 3.0e-09 65.9 69 39.1
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.9e-08 63.2 148 28.4
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.9e-08 63.2 156 25.0
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.9e-08 63.2 150 30.0
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 1.9e-08 63.2 70 41.4
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 5.6e-08 61.6 64 40.6
Nitab4.5_0002197g0030 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.6e-07 60.1 35 77.1
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 3.7e-07 58.9 72 37.5
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 6.2e-07 58.2 150 27.3
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 6.2e-07 58.2 153 26.8
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.1e-06 57.4 78 33.3
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 4.0e-06 55.5 151 26.5
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 5.3e-06 55.1 148 27.0
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 5.3e-06 55.1 150 24.7


User provided reference genes

Program Settings