Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001478g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.7e-58 228.4 112 100.0
Solyc11g012550.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.1e-14 80.5 66 62.1
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.1e-14 80.5 62 64.5
CAN.G1227.3 Capsicum annuum HOM05D000185 ORTHO05D000017 1.2e-13 80.1 67 61.2
Nitab4.5_0001668g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.6e-13 79.7 62 62.9
Sopen11g007270 Solanum pennellii HOM05D000007 ORTHO05D000017 5.9e-13 77.8 62 64.5
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.7e-13 77.4 90 47.8
CAN.G575.138 Capsicum annuum HOM05D000007 ORTHO05D000017 1.7e-12 76.3 58 67.2
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 1.7e-12 76.3 62 62.9
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-12 75.9 60 61.7
Solyc11g012540.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.9e-12 75.5 62 62.9
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 3.8e-12 75.1 58 65.5
CAN.G696.13 Capsicum annuum HOM05D000007 ORTHO05D000017 3.8e-12 75.1 61 60.7
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 6.5e-12 74.3 58 65.5
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-11 73.6 60 58.3
CAN.G1156.5 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-11 73.6 58 63.8
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-11 73.6 70 60.0
Sopen09g001690 Solanum pennellii HOM05D000007 ORTHO05D000017 1.1e-11 73.6 67 55.2
CAN.G2122.5 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-11 73.2 67 55.2
CAN.G2075.8 Capsicum annuum HOM05D000007 ORTHO05D011633 1.9e-11 72.8 88 47.7
CAN.G2702.1 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-11 72.8 60 63.3
PGSC0003DMG400007431 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-11 72.8 60 60.0
PGSC0003DMG400025404 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-11 72.8 67 52.2
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-11 72.4 87 44.8
Solyc09g005520.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.2e-11 72.0 67 53.7
CAN.G1579.17 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-11 71.6 88 47.7
CAN.G181.17 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-11 71.6 58 65.5
CAN.G575.120 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-11 71.6 70 58.6
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.2e-11 71.6 63 60.3
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 5.5e-11 71.2 74 52.7
Solyc09g005480.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 5.5e-11 71.2 67 53.7
CAN.G1209.1 Capsicum annuum HOM05D000007 ORTHO05D000017 7.2e-11 70.9 73 53.4
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.2e-11 70.9 65 56.9
Nitab4.5_0004725g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-10 70.1 69 58.0
Nitab4.5_0017036g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-10 70.1 60 61.7
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 1.2e-10 70.1 60 58.3
CAN.G798.50 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-10 69.7 63 57.1
Solyc11g008300.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.6e-10 69.7 89 44.9
Sopen09g001370 Solanum pennellii HOM05D000007 ORTHO05D000017 1.6e-10 69.7 63 55.6
CAN.G321.65 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-10 68.9 65 55.4
Nitab4.5_0000874g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.7e-10 68.9 60 58.3
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.7e-10 68.9 62 61.3
CAN.G108.40 Capsicum annuum HOM05D000007 ORTHO05D000017 3.6e-10 68.6 63 57.1
Solyc09g005770.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.6e-10 68.6 64 53.1
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 3.6e-10 68.6 71 53.5
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 4.7e-10 68.2 66 50.0
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.7e-10 68.2 59 59.3
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 6.1e-10 67.8 70 55.7
CAN.G2075.9 Capsicum annuum HOM05D000007 ORTHO05D000017 6.1e-10 67.8 70 55.7
CAN.G1374.17 Capsicum annuum HOM05D000007 ORTHO05D000017 8.0e-10 67.4 69 53.6
Nitab4.5_0005858g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.0e-10 67.4 58 62.1
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-09 67.0 60 61.7
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-09 67.0 89 43.8
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-09 67.0 57 61.4
CAN.G1034.48 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-09 66.6 69 52.2
CAN.G1134.13 Capsicum annuum HOM05D000176 ORTHO05D000017 1.4e-09 66.6 62 58.1
CAN.G1652.19 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-09 66.6 63 55.6
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-09 66.6 51 64.7
PGSC0003DMG400036420 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-09 66.6 56 64.3
PGSC0003DMG400028421 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-09 66.2 67 55.2
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 2.3e-09 65.9 60 53.3
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.3e-09 65.9 63 50.8
CAN.G1344.8 Capsicum annuum HOM05D000007 ORTHO05D000017 3.0e-09 65.5 59 57.6
CAN.G321.66 Capsicum annuum HOM05D000007 ORTHO05D000017 3.0e-09 65.5 52 59.6
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.0e-09 65.5 56 64.3
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.0e-09 65.1 94 41.5
CAN.G2075.10 Capsicum annuum HOM05D000007 ORTHO05D000017 5.2e-09 64.7 60 60.0
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 6.8e-09 64.3 58 60.3
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.8e-09 64.3 57 57.9
CAN.G575.137 Capsicum annuum HOM05D000007 ORTHO05D000017 8.8e-09 63.9 63 55.6
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-08 63.5 63 57.1
CAN.G222.159 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-08 63.5 49 65.3
CAN.G645.21 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-08 63.5 56 60.7
Nitab4.5_0002499g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-08 63.2 57 59.6
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-08 63.2 57 59.6
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-08 62.8 63 57.1
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-08 62.8 63 57.1
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 2.6e-08 62.4 61 54.1
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-08 62.4 62 54.8
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-08 62.4 57 54.4
CAN.G1121.9 Capsicum annuum HOM05D000007 ORTHO05D000017 3.4e-08 62.0 60 51.7
CAN.G1126.10 Capsicum annuum HOM05D000007 ORTHO05D000017 5.7e-08 61.2 52 57.7
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 5.7e-08 61.2 55 61.8
CAN.G1799.9 Capsicum annuum HOM05D000007 ORTHO05D000017 7.5e-08 60.8 59 59.3
PGSC0003DMG400027935 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.5e-08 60.8 53 62.3
CAN.G623.48 Capsicum annuum HOM05D000007 ORTHO05D000017 9.8e-08 60.5 60 53.3
Solyc01g104940.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.7e-07 59.7 54 59.3
CAN.G623.46 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-07 59.3 60 53.3
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.2e-07 59.3 56 57.1
CAN.G1143.2 Capsicum annuum HOM05D000007 ORTHO05D000017 2.8e-07 58.9 55 54.5
CAN.G1375.9 Capsicum annuum HOM05D000007 ORTHO05D000017 3.7e-07 58.5 58 50.0
CiPaw.15G116700 Carya illinoinensis HOM05D000007 ORTHO05D000039 3.7e-07 58.5 69 42.0
Migut.E01121 Erythranthe guttata HOM05D000007 ORTHO05D000039 3.7e-07 58.5 46 60.9
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.7e-07 58.5 67 52.2
PGSC0003DMG400001294 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.8e-07 58.2 54 55.6
HanXRQChr04g0109011 Helianthus annuus HOM05D000007 ORTHO05D012101 6.3e-07 57.8 39 66.7
Migut.N00596 Erythranthe guttata HOM05D000007 ORTHO05D005385 8.3e-07 57.4 59 52.5
PGSC0003DMG400037258 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.3e-07 57.4 71 46.5
CAN.G488.23 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-06 57.0 61 52.5
Migut.N00595 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.1e-06 57.0 59 52.5
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-06 57.0 62 50.0
CAN.G623.10 Capsicum annuum HOM05D022150 ORTHO05D000017 1.4e-06 56.6 58 53.4
FvH4_6g06680 Fragaria vesca HOM05D000007 ORTHO05D000039 1.4e-06 56.6 90 38.9
PGSC0003DMG400034923 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-06 56.6 47 63.8
CAN.G1557.16 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-06 56.2 45 57.8
Nitab4.5_0001438g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.8e-06 56.2 57 54.4
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-06 55.8 86 43.0
FvH4_3g33320 Fragaria vesca HOM05D000007 ORTHO05D000017 2.4e-06 55.8 41 61.0
FAN11G2267 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-06 55.8 41 61.0
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 2.4e-06 55.8 62 50.0
PSO017G5193 Papaver somniferum HOM05D004049 ORTHO05D004496 4.1e-06 55.1 41 61.0
PGSC0003DMG401013254 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.1e-06 55.1 50 60.0
CiPaw.15G117000 Carya illinoinensis HOM05D000007 ORTHO05D000039 5.4e-06 54.7 42 57.1
Sc10g0006140 Simmondsia chinensis HOM05D000007 ORTHO05D000039 5.4e-06 54.7 62 46.8
TPR.G31796 Trifolium pratense HOM05D000007 ORTHO05D000017 5.4e-06 54.7 97 35.1
Cc03_g06080 Coffea canephora HOM05D000007 ORTHO05D000017 7.0e-06 54.3 41 58.5
Cc03_g06100 Coffea canephora HOM05D000007 ORTHO05D010342 7.0e-06 54.3 41 58.5
Migut.N00605 Erythranthe guttata HOM05D000007 ORTHO05D005385 7.0e-06 54.3 59 50.8
PSO732G0627 Papaver somniferum HOM05D004049 ORTHO05D004496 7.0e-06 54.3 50 52.0
SalBow1G7568 Salvia bowleyana HOM05D000007 ORTHO05D000017 7.0e-06 54.3 70 45.7
CAN.G867.5 Capsicum annuum HOM05D000007 ORTHO05D000017 9.1e-06 53.9 56 51.8
CiPaw.07G037700 Carya illinoinensis HOM05D000007 ORTHO05D000017 9.1e-06 53.9 58 48.3
AUR62010298 Chenopodium quinoa HOM05D000007 ORTHO05D000017 9.1e-06 53.9 43 65.1
Ciclev10006734m.g Citrus clementina HOM05D000007 ORTHO05D000017 9.1e-06 53.9 103 35.9
FAN14G2639 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.1e-06 53.9 71 50.7
Peaxi162Scf00700g00311 Petunia axillaris HOM05D000007 ORTHO05D000039 9.1e-06 53.9 64 51.6


User provided reference genes

Program Settings