Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 7.0e-167 590.5 290 100.0
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 1.9e-135 486.1 291 80.8
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.4e-129 464.9 289 81.3
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 1.3e-120 436.8 261 80.5
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 1.9e-116 422.9 296 73.6
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.5e-116 422.5 259 79.5
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 4.2e-79 298.9 291 49.5
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.2e-73 280.8 270 50.0
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 2.2e-72 276.6 173 79.2
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 9.8e-68 261.2 301 47.2
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 4.8e-67 258.8 299 47.5
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.8e-67 258.8 184 72.3
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 6.3e-67 258.5 291 45.7
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 2.4e-66 256.5 296 47.6
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 1.6e-65 253.8 261 47.1
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.7e-64 250.4 288 45.8
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 3.8e-64 249.2 292 43.5
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 8.5e-64 248.1 312 43.9
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.2e-62 244.2 326 41.4
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 2.1e-62 243.4 293 44.7
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 4.7e-62 242.3 301 44.5
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 4.0e-61 239.2 290 45.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.0e-60 236.9 295 47.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 3.4e-60 236.1 280 44.3
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 4.4e-60 235.7 300 43.7
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.3e-59 234.2 275 47.3
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.4e-58 230.7 307 42.7
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 3.1e-58 229.6 299 41.5
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 5.4e-58 228.8 299 42.8
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 7.0e-58 228.4 311 41.2
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.2e-57 227.6 299 42.8
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.6e-57 227.3 183 62.8
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 7.8e-57 224.9 292 42.1
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.9e-55 220.3 301 41.9
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.9e-55 220.3 293 42.3
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 2.5e-55 219.9 292 41.4
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.6e-54 217.2 298 40.9
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 1.6e-54 217.2 302 41.1
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.3e-51 207.6 289 40.1
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 2.9e-51 206.5 301 39.5
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 8.3e-51 204.9 294 39.5
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.1e-50 204.5 303 37.6
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.1e-50 204.5 301 38.9
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 2.0e-49 200.3 312 37.8
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 1.0e-48 198.0 327 36.7
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.7e-48 197.2 279 41.9
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 3.9e-48 196.1 314 36.6
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 3.3e-47 193.0 280 38.2
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 1.4e-45 187.6 283 37.5
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 1.2e-44 184.5 289 37.4
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 1.5e-44 184.1 289 37.7
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 2.0e-44 183.7 284 38.0
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 4.4e-44 182.6 363 33.6
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 1.7e-43 180.6 290 39.0
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.9e-42 177.2 301 36.9
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.4e-42 176.8 213 42.7
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 4.1e-42 176.0 232 40.1
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 1.2e-41 174.5 298 36.9
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 2.0e-41 173.7 301 36.5
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 2.7e-41 173.3 303 36.6
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 3.5e-41 172.9 287 34.5
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 1.3e-40 171.0 272 40.1
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 3.0e-40 169.9 303 35.0
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 6.6e-40 168.7 301 35.9
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 1.6e-38 164.1 292 34.2
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 2.1e-38 163.7 230 38.3
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 4.7e-38 162.5 256 37.1
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 6.2e-38 162.2 293 34.5
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 8.1e-38 161.8 294 35.7
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 4.0e-37 159.5 294 35.0
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 4.0e-37 159.5 294 35.0
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 3.4e-36 156.4 293 33.8
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 4.9e-35 152.5 302 32.1
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.4e-34 151.0 299 30.4
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.7e-32 144.1 149 51.0
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.3e-32 143.7 173 45.7
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 6.6e-32 142.1 298 34.6
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 3.3e-31 139.8 210 39.5
Nitab4.5_0000273g0210 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.6e-31 139.0 120 63.3
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 2.8e-30 136.7 140 51.4
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 1.3e-27 127.9 203 35.0
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 5.4e-26 122.5 170 40.0
Nitab4.5_0002197g0030 Nicotiana tabacum HOM05D003067 ORTHO05D009378 9.6e-23 111.7 192 41.1
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 8.1e-22 108.6 92 58.7
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.9e-18 97.4 236 30.5
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 7.8e-17 92.0 154 34.4
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 7.8e-17 92.0 228 28.1
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 1.1e-13 81.6 184 28.3
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.5e-12 77.8 52 67.3
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 2.4e-10 70.5 334 25.1
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 4.3e-07 59.7 114 33.3
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 4.3e-07 59.7 129 32.6
Sopen11g015440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 58.2 66 51.5
Sopen03g003180 Solanum pennellii HOM05D004956 ORTHO05D006284 4.8e-06 56.2 35 74.3
Sopen11g017880 Solanum pennellii HOM05D004956 ORTHO05D006284 4.8e-06 56.2 35 74.3


User provided reference genes

Program Settings