Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 7.1e-106 387.5 229 100.0
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 1.7e-83 313.2 230 74.3
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 2.2e-83 312.8 230 73.9
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 6.5e-83 311.2 230 73.9
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 3.0e-80 302.4 202 91.6
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 3.8e-75 285.4 224 72.8
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 7.0e-61 238.0 168 77.4
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 1.8e-40 170.2 233 48.5
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 6.4e-38 161.8 231 47.6
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 1.1e-37 161.0 254 42.5
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 1.1e-37 161.0 235 46.8
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 1.4e-37 160.6 230 48.3
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 1.4e-37 160.6 234 45.7
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 7.0e-37 158.3 200 51.0
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 9.2e-37 157.9 206 51.9
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 1.2e-36 157.5 218 49.1
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 3.9e-35 152.5 207 50.2
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 8.6e-35 151.4 221 47.5
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 1.5e-34 150.6 229 45.0
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 1.5e-34 150.6 227 47.6
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 7.3e-34 148.3 227 46.3
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 1.2e-33 147.5 231 44.6
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 1.2e-33 147.5 213 46.0
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 2.1e-33 146.7 222 46.4
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 4.7e-33 145.6 229 47.2
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 6.2e-33 145.2 232 46.6
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 1.4e-32 144.1 215 44.7
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.3e-32 143.3 242 46.7
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 3.1e-32 142.9 216 45.8
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 4.0e-32 142.5 236 47.0
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 6.8e-32 141.7 204 49.5
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 6.8e-32 141.7 227 44.5
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 8.9e-32 141.4 224 45.5
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 2.0e-31 140.2 209 45.5
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 3.4e-31 139.4 230 48.3
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 3.4e-31 139.4 224 44.2
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 4.4e-31 139.0 199 48.2
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 5.8e-31 138.7 230 45.7
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 7.5e-31 138.3 214 46.3
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 9.8e-31 137.9 236 44.1
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 1.3e-30 137.5 215 42.8
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 1.3e-30 137.5 229 44.5
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 1.7e-30 137.1 227 44.1
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 1.7e-30 137.1 225 41.8
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 2.2e-30 136.7 224 40.2
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 2.9e-30 136.3 213 46.9
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 2.9e-30 136.3 226 43.4
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 3.7e-30 136.0 227 44.1
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 3.7e-30 136.0 207 47.8
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 4.9e-30 135.6 252 40.9
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 6.4e-30 135.2 209 47.8
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 6.4e-30 135.2 227 43.2
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 1.1e-29 134.4 248 41.5
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.1e-29 134.4 231 43.7
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 1.9e-29 133.7 213 44.6
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 4.1e-29 132.5 226 43.8
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 9.2e-29 131.3 230 45.7
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.2e-28 131.0 241 39.4
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 1.2e-28 131.0 228 43.0
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.1e-28 130.2 227 42.7
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 3.0e-27 126.3 202 44.6
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 1.5e-26 124.0 183 45.4
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 3.3e-26 122.9 242 39.7
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 3.3e-26 122.9 211 43.6
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 4.3e-26 122.5 204 43.1
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 5.6e-26 122.1 225 37.8
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 5.6e-26 122.1 204 44.6
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 1.2e-25 120.9 282 37.2
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.2e-25 120.9 240 38.3
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 2.1e-25 120.2 153 49.0
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 2.8e-25 119.8 231 42.4
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 4.7e-25 119.0 264 36.0
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 1.8e-24 117.1 263 36.9
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 2.3e-24 116.7 177 46.9
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 2.3e-24 116.7 227 41.0
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 3.1e-24 116.3 242 38.8
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 5.2e-24 115.5 264 36.0
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 1.2e-23 114.4 164 47.0
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 1.2e-23 114.4 145 51.7
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 1.5e-23 114.0 269 37.2
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 2.0e-23 113.6 244 36.5
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 2.0e-23 113.6 264 36.0
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 2.0e-23 113.6 212 42.5
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 2.6e-23 113.2 227 40.5
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 2.6e-23 113.2 256 36.7
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 7.6e-23 111.7 185 43.2
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 9.9e-23 111.3 175 42.9
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 4.9e-22 109.0 331 32.6
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 6.4e-22 108.6 208 42.3
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 6.4e-22 108.6 224 39.3
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 8.3e-22 108.2 238 37.8
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 1.1e-21 107.8 240 35.8
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 4.1e-21 105.9 213 38.5
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 5.4e-21 105.5 252 36.9
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 7.1e-21 105.1 203 39.9
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 7.1e-21 105.1 238 36.1
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 1.2e-20 104.4 233 36.5
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 2.1e-20 103.6 194 39.7
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 2.1e-20 103.6 170 41.8
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 6.0e-20 102.1 223 37.7
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 1.3e-19 100.9 200 43.0
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 1.3e-19 100.9 201 38.8
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 2.3e-19 100.1 212 36.3
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 5.1e-19 99.0 148 47.3
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 6.6e-19 98.6 269 34.2
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 6.6e-19 98.6 150 48.0
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 8.6e-19 98.2 215 38.1
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 4.3e-18 95.9 149 48.3
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 4.3e-18 95.9 186 41.4
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 1.2e-17 94.4 233 38.6
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 2.8e-17 93.2 257 34.2
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 2.8e-17 93.2 196 38.3
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 6.2e-17 92.0 229 34.9
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 8.1e-17 91.7 231 35.9
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 8.1e-17 91.7 231 35.9
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 1.1e-16 91.3 184 42.4
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 1.8e-16 90.5 149 45.0
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 4.0e-16 89.4 191 37.7
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 6.8e-16 88.6 200 35.5
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 8.9e-16 88.2 131 44.3
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.5e-15 87.4 193 34.7
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 4.4e-15 85.9 204 39.2
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 1.3e-14 84.3 169 40.2
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 2.2e-14 83.6 162 38.3
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 2.9e-14 83.2 269 32.0
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 3.8e-14 82.8 135 41.5
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 6.4e-14 82.0 234 35.9
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 1.4e-13 80.9 227 32.6
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 4.6e-12 75.9 229 31.0
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 6.0e-12 75.5 198 37.4
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 1.3e-11 74.3 162 34.0
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 1.7e-11 73.9 165 38.8
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 3.0e-11 73.2 99 48.5
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 1.1e-10 71.2 179 31.8
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 1.9e-10 70.5 179 37.4
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 1.9e-10 70.5 179 37.4
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 2.1e-09 67.0 37 81.1
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 6.2e-09 65.5 153 35.9
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 8.1e-09 65.1 218 29.4
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.8e-08 63.9 260 29.6
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.8e-08 63.9 260 29.6
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 5.3e-08 62.4 110 42.7
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 9.0e-08 61.6 191 33.5
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 1.5e-07 60.8 157 36.9
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 2.6e-07 60.1 172 36.0
BcaC09g52177 Brassica carinata HOM05D003513 ORTHO05D004660 2.9e-06 56.6 111 39.6


User provided reference genes

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