Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.3e-172 610.1 427 100.0
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 7.5e-133 478.0 416 83.2
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 3.8e-129 465.7 407 83.3
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 9.8e-125 451.1 398 85.4
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 2.8e-119 433.0 420 79.3
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 6.0e-106 388.7 421 74.8
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 3.9e-105 386.0 420 74.5
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.9e-104 383.6 416 68.8
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 8.9e-102 374.8 406 73.4
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 5.8e-101 372.1 408 70.1
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.1e-99 367.9 411 70.3
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.4e-99 365.5 421 58.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 9.2e-99 364.8 404 73.0
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.2e-98 364.4 415 73.7
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.6e-98 364.0 409 74.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.7e-98 363.2 411 70.3
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 6.0e-98 362.1 436 68.3
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 5.1e-97 359.0 420 66.9
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 2.5e-96 356.7 407 71.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 2.5e-96 356.7 400 72.2
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 9.5e-96 354.8 413 67.8
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 9.5e-96 354.8 421 74.1
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.2e-95 354.4 413 72.9
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 6.2e-95 352.1 408 64.5
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.4e-94 350.9 408 65.7
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 3.1e-94 349.7 410 72.9
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 5.2e-94 349.0 411 65.7
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 6.8e-94 348.6 414 72.5
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 8.9e-94 348.2 415 65.8
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.2e-93 347.8 367 73.3
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.5e-93 347.4 393 68.7
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.0e-93 347.1 418 57.9
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.3e-92 344.4 412 68.0
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 3.8e-92 342.8 409 72.9
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.4e-91 340.1 427 67.7
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 4.2e-91 339.3 411 70.6
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 5.4e-91 339.0 256 75.8
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 9.2e-91 338.2 417 72.2
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 9.2e-91 338.2 405 64.9
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 1.2e-90 337.8 415 69.6
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 3.0e-89 333.2 406 67.2
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 8.7e-89 331.6 399 69.4
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.1e-88 331.3 372 73.4
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.5e-88 330.1 415 66.7
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.3e-87 327.8 416 66.3
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.1e-87 327.0 406 69.5
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 3.6e-87 326.2 405 67.7
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.8e-87 325.9 252 70.6
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.8e-87 325.9 252 70.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.1e-86 324.7 403 67.0
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.4e-86 324.3 425 71.3
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-86 324.3 426 55.6
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.8e-86 323.9 420 67.1
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 4.0e-86 322.8 431 60.8
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.3e-86 322.4 416 68.8
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 6.9e-86 322.0 429 56.4
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 6.9e-86 322.0 416 68.8
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 9.0e-86 321.6 405 67.2
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.0e-85 320.5 208 81.7
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 3.4e-85 319.7 420 65.7
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.4e-85 319.7 463 58.7
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 9.9e-85 318.2 408 63.0
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 9.9e-85 318.2 371 74.9
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 3.8e-84 316.2 258 65.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.8e-84 316.2 260 74.2
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 4.9e-84 315.8 436 62.6
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 6.4e-84 315.5 423 67.4
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.9e-83 313.9 426 70.7
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 2.1e-82 310.5 409 62.3
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.7e-82 310.1 427 62.8
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.7e-82 310.1 258 70.9
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 6.6e-81 305.4 254 68.9
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 8.7e-81 305.1 285 68.8
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 3.3e-80 303.1 418 63.2
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 5.6e-80 302.4 255 68.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 5.6e-80 302.4 254 69.3
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 7.3e-80 302.0 426 64.3
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.8e-78 297.4 428 60.3
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.0e-78 296.2 414 69.1
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 6.9e-78 295.4 250 68.8
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.3e-76 291.2 429 62.0
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 7.1e-75 285.4 253 69.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.3e-73 281.2 437 57.4
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 2.1e-71 273.9 211 73.9
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.8e-71 273.5 165 81.2
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.4e-70 271.2 166 80.1
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.0e-69 267.3 254 60.6
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.3e-65 253.8 160 76.2
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 4.3e-64 249.6 165 75.8
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.3e-63 248.1 147 81.6
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 2.1e-63 247.3 214 67.3
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 3.7e-63 246.5 165 74.5
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 3.7e-63 246.5 165 74.5
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 3.7e-63 246.5 165 74.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 3.7e-63 246.5 165 74.5
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 1.8e-62 244.2 165 73.9
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 9.0e-62 241.9 213 66.2
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 9.0e-62 241.9 271 57.6
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 4.5e-61 239.6 168 72.0
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 2.7e-58 230.3 165 69.1
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 3.5e-58 229.9 204 59.8
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 6.9e-54 215.7 164 64.6
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.5e-53 214.5 372 62.9
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-51 207.6 163 62.6
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-51 207.6 163 62.6
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.1e-50 204.1 167 62.9
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.1e-50 204.1 167 62.9
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 2.2e-39 167.5 152 59.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 3.0e-33 147.1 169 48.5
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 9.1e-30 135.6 168 46.4
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 8.5e-28 129.0 184 46.7
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.7e-23 114.8 165 42.4
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 4.5e-21 106.7 91 94.5
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 8.5e-20 102.4 64 79.7
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.8e-14 84.7 139 36.0
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 2.7e-13 80.9 117 41.0
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.5e-11 75.1 282 53.5
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.8e-10 70.9 95 44.2
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 3.7e-07 60.5 82 41.5
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.4e-06 58.5 115 34.8
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 5.4e-06 56.6 113 32.7
TWI75G0967 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 9.2e-06 55.8 113 31.9
TWI75G1441 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 9.2e-06 55.8 113 31.9


User provided reference genes

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