Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 3.1e-165 585.1 304 100.0
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 8.2e-150 533.9 312 92.3
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 9.4e-130 467.2 304 84.2
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.8e-128 463.0 311 81.0
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.1e-125 453.8 306 82.0
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 2.4e-125 452.6 308 80.8
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 4.1e-125 451.8 302 81.1
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.1e-90 337.4 287 62.0
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 4.3e-90 335.5 298 60.7
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 7.3e-90 334.7 298 62.4
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 1.2e-89 334.0 287 62.7
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 2.1e-89 333.2 258 67.8
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 2.1e-89 333.2 255 66.3
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 8.0e-89 331.3 298 61.1
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 8.0e-89 331.3 287 61.7
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.4e-88 330.5 272 65.1
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 5.2e-88 328.6 254 65.0
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 5.2e-88 328.6 258 66.7
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 2.0e-87 326.6 259 67.2
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 6.4e-86 321.6 256 65.2
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 1.9e-85 320.1 244 68.0
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 4.1e-85 318.9 265 65.3
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 1.2e-84 317.4 254 64.2
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.2e-84 317.4 246 65.0
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 3.5e-84 315.8 269 62.5
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 1.5e-82 310.5 246 67.1
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 5.6e-82 308.5 257 61.5
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 1.2e-81 307.4 257 61.5
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 1.2e-81 307.4 257 61.5
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.2e-81 307.4 257 61.5
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 2.1e-81 306.6 257 61.5
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.1e-81 306.6 257 61.5
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 2.8e-81 306.2 230 68.3
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 6.2e-81 305.1 268 59.7
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.1e-80 304.3 257 61.9
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 1.4e-80 303.9 249 62.2
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.4e-80 303.9 289 58.5
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 5.2e-80 302.0 246 64.2
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 1.2e-79 300.8 283 57.6
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 2.0e-79 300.1 256 61.3
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 5.8e-79 298.5 257 61.1
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 5.8e-79 298.5 255 62.4
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 1.1e-77 294.3 262 61.8
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 4.6e-76 288.9 257 59.1
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 3.9e-75 285.8 241 61.0
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 6.6e-75 285.0 295 56.6
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 7.3e-74 281.6 253 60.1
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 1.2e-73 280.8 287 56.1
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 2.9e-70 269.6 209 64.1
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 1.9e-69 266.9 272 54.4
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.3e-67 260.8 206 65.0
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 5.1e-67 258.8 208 66.3
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 3.3e-66 256.1 204 65.2
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.8e-65 252.3 257 56.8
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 2.0e-63 246.9 204 62.3
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 1.3e-62 244.2 208 59.1
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 2.4e-61 240.0 230 57.4
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.6e-60 237.3 267 50.9
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 6.0e-60 235.3 245 51.0
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 1.1e-58 231.1 241 53.9
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 1.5e-55 220.7 184 63.0
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 4.3e-50 202.6 245 44.5
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 2.6e-47 193.4 268 39.9
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 2.2e-46 190.3 268 44.4
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 1.7e-38 164.1 153 60.8
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 3.3e-34 149.8 101 74.3
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 1.1e-32 144.8 162 53.7
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 5.9e-31 139.0 90 74.4
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 1.7e-30 137.5 125 62.4
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 1.1e-29 134.8 243 35.4
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.8e-27 127.5 113 61.1
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 4.5e-23 112.8 101 60.4
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 9.7e-18 95.1 84 61.9
CAN.G271.1 Capsicum annuum HOM05D003774 ORTHO05D010174 6.3e-17 92.4 129 47.3
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 2.1e-12 77.4 148 33.8
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 2.6e-10 70.5 113 34.5
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 1.3e-09 68.2 334 23.1


User provided reference genes

Program Settings