Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001458g0030 Nicotiana tabacum HOM05D001568 ORTHO05D004404 4.5e-62 241.1 125 100.0
Peaxi162Scf00003g02832 Petunia axillaris HOM05D001568 ORTHO05D004404 1.3e-21 106.7 76 80.3
Peaxi162Scf00016g03013 Petunia axillaris HOM05D001568 ORTHO05D004404 3.0e-21 105.5 61 95.1
PGSC0003DMG400012835 Solanum tuberosum HOM05D001568 ORTHO05D004404 4.3e-20 101.7 60 93.3
Nitab4.5_0001099g0080 Nicotiana tabacum HOM05D001568 ORTHO05D004404 9.5e-20 100.5 60 91.7
CAN.G606.68 Capsicum annuum HOM05D001568 ORTHO05D004404 1.2e-19 100.1 60 91.7
PGSC0003DMG400025934 Solanum tuberosum HOM05D001568 ORTHO05D004404 2.8e-19 99.0 60 90.0
Solyc01g106890.2 Solanum lycopersicum HOM05D001568 ORTHO05D004404 8.0e-19 97.4 60 88.3
Sopen01g049170 Solanum pennellii HOM05D001568 ORTHO05D004404 8.0e-19 97.4 60 88.3
Oeu037288.1 Olea europaea HOM05D001568 ORTHO05D004404 1.8e-18 96.3 60 85.0
Cpa.g.sc106.34 Carica papaya HOM05D001568 ORTHO05D004404 2.3e-18 95.9 60 86.7
Oeu021354.1 Olea europaea HOM05D001568 ORTHO05D004404 4.0e-18 95.1 60 85.0
Potri.001G290200 Populus trichocarpa HOM05D001568 ORTHO05D004404 8.9e-18 94.0 60 85.0
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 8.9e-18 94.0 60 83.3
Hma1.2p1_1051F.1_g252100 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 1.2e-17 93.6 60 85.0
Hma1.2p1_2793F.1_g328635 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 1.2e-17 93.6 60 85.0
Thecc.02G119400 Theobroma cacao HOM05D001568 ORTHO05D004404 1.5e-17 93.2 60 86.7
Manes.10G086400 Manihot esculenta HOM05D001568 ORTHO05D004404 2.0e-17 92.8 60 85.0
MD05G1104700 Malus domestica HOM05D001568 ORTHO05D004404 5.8e-17 91.3 58 91.4
RcHm_v2.0_Chr6g0248611 Rosa chinensis HOM05D001568 ORTHO05D004404 7.5e-17 90.9 57 89.5
COL.COLO4_32490 Corchorus olitorius HOM05D001568 ORTHO05D004404 9.8e-17 90.5 63 84.1
Potri.009G085800 Populus trichocarpa HOM05D001568 ORTHO05D004404 9.8e-17 90.5 61 85.2
TAR376G0823 Trochodendron aralioides HOM05D001568 ORTHO05D004404 9.8e-17 90.5 60 81.7
FvH4_2g03450 Fragaria vesca HOM05D001568 ORTHO05D004404 1.3e-16 90.1 63 84.1
Prupe.8G149100 Prunus persica HOM05D001568 ORTHO05D004404 1.3e-16 90.1 58 91.4
TAR625G0364 Trochodendron aralioides HOM05D001568 ORTHO05D004404 1.3e-16 90.1 60 81.7
MD10G1109000 Malus domestica HOM05D001568 ORTHO05D004404 1.7e-16 89.7 58 91.4
QL11p029492 Quercus lobata HOM05D001568 ORTHO05D004404 1.7e-16 89.7 61 80.3
Manes.07G057600 Manihot esculenta HOM05D001568 ORTHO05D004404 2.2e-16 89.4 60 81.7
Nn5g30644 Nelumbo nucifera HOM05D001568 ORTHO05D004404 2.2e-16 89.4 60 81.7
Atru.chr5.2306 Acer truncatum HOM05D001568 ORTHO05D004404 2.9e-16 89.0 60 86.7
CSS0019733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 2.9e-16 89.0 61 83.6
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 2.9e-16 89.0 60 80.0
CiPaw.05G020400 Carya illinoinensis HOM05D001568 ORTHO05D004404 4.9e-16 88.2 58 86.2
ClCG10G010080 Citrullus lanatus HOM05D001568 ORTHO05D004404 4.9e-16 88.2 61 82.0
SalBow6G5155 Salvia bowleyana HOM05D001568 ORTHO05D004404 4.9e-16 88.2 61 77.0
TWI59G0092 Tripterygium wilfordii HOM05D001568 ORTHO05D004404 4.9e-16 88.2 62 80.6
Duzib052G0823 Durio zibethinus HOM05D001568 ORTHO05D004404 6.4e-16 87.8 60 81.7
TAR628G0963 Trochodendron aralioides HOM05D001568 ORTHO05D004404 6.4e-16 87.8 60 78.3
FAN15G0246 Fragaria x ananassa HOM05D001568 ORTHO05D004404 8.3e-16 87.4 61 85.2
MELO3C018020.2 Cucumis melo HOM05D001568 ORTHO05D004404 1.4e-15 86.7 60 81.7
Ciclev10029760m.g Citrus clementina HOM05D001568 ORTHO05D004404 1.9e-15 86.3 58 86.2
FAN24G1537 Fragaria x ananassa HOM05D001568 ORTHO05D004404 1.9e-15 86.3 58 87.9
Nn6g34513 Nelumbo nucifera HOM05D001568 ORTHO05D004404 2.4e-15 85.9 59 79.7
CsaV3_4G000120 Cucumis sativus L. HOM05D001568 ORTHO05D004404 3.2e-15 85.5 60 80.0
SHI05029 Sapria himalayana HOM05D001568 ORTHO05D004404 3.2e-15 85.5 59 78.0
Aqoxy6G02530 Aquilegia oxysepala HOM05D001568 ORTHO05D004404 4.1e-15 85.1 59 79.7
Migut.B00459 Erythranthe guttata HOM05D001568 ORTHO05D004404 7.0e-15 84.3 62 75.8
PSO017G7292 Papaver somniferum HOM05D001568 ORTHO05D004404 7.0e-15 84.3 62 77.4
PSO170G4708 Papaver somniferum HOM05D001568 ORTHO05D004404 7.0e-15 84.3 62 77.4
Duzib132G0295 Durio zibethinus HOM05D001568 ORTHO05D004404 9.2e-15 84.0 61 83.6
Hma1.2p1_0661F.1_g198120 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 9.2e-15 84.0 61 80.3
CSS0000365 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 1.2e-14 83.6 62 77.4
Psat0s6663g0040 Pisum sativum HOM05D001568 ORTHO05D004404 1.2e-14 83.6 63 76.2
Gohir.D02G203199 Gossypium hirsutum HOM05D001568 ORTHO05D004404 1.6e-14 83.2 63 77.8
Gorai.005G230000 Gossypium raimondii HOM05D001568 ORTHO05D004404 1.6e-14 83.2 63 77.8
Haze_10310 Corylus avellana HOM05D001568 ORTHO05D004404 2.7e-14 82.4 61 77.0
CANSAT25G0020 Cannabis sativa HOM05D001568 ORTHO05D004404 3.5e-14 82.0 59 83.1
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 3.5e-14 82.0 63 76.2
RhsimUnG0183600 Rhododendron simsii HOM05D001568 ORTHO05D004404 3.5e-14 82.0 63 76.2
Gohir.A13G047600 Gossypium hirsutum HOM05D001568 ORTHO05D004404 6.0e-14 81.3 62 77.4
Gohir.D13G045900 Gossypium hirsutum HOM05D001568 ORTHO05D004404 6.0e-14 81.3 62 77.4
Sed0001915 Sechium edule HOM05D001568 ORTHO05D004404 6.0e-14 81.3 61 78.7
Cc00_g17980 Coffea canephora HOM05D001568 ORTHO05D004404 7.8e-14 80.9 62 74.2
Lj1g0010962 Lotus japonicus HOM05D001568 ORTHO05D004404 7.8e-14 80.9 64 76.6
Gohir.A03G181200 Gossypium hirsutum HOM05D001568 ORTHO05D004404 1.0e-13 80.5 63 76.2
Gorai.013G051400 Gossypium raimondii HOM05D001568 ORTHO05D004404 1.0e-13 80.5 62 75.8
Actinidia34354 Actinidia chinensis HOM05D001568 ORTHO05D004404 1.7e-13 79.7 59 76.3
AL3G33100 Arabidopsis lyrata HOM05D001568 ORTHO05D004404 1.7e-13 79.7 60 71.7
Carub.0003s1953 Capsella rubella HOM05D001568 ORTHO05D004404 2.3e-13 79.3 60 71.7
TPR.G8320 Trifolium pratense HOM05D001568 ORTHO05D004404 2.3e-13 79.3 60 78.3
AUR62027022 Chenopodium quinoa HOM05D001568 ORTHO05D004404 3.0e-13 79.0 64 71.9
Medtr5g005330 Medicago truncatula HOM05D001568 ORTHO05D004404 3.0e-13 79.0 60 78.3
THA.LOC104803443 Tarenaya hassleriana HOM05D001568 ORTHO05D004404 5.1e-13 78.2 65 72.3
Actinidia27997 Actinidia chinensis HOM05D001568 ORTHO05D004404 8.6e-13 77.4 63 71.4
DCAR_021945 Daucus carota HOM05D001568 ORTHO05D004404 8.6e-13 77.4 67 73.1
Glyma.01G241700 Glycine max HOM05D001568 ORTHO05D004404 8.6e-13 77.4 56 82.1
Phvul.002G051000 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 1.1e-12 77.0 52 86.5
AT3G19660 Arabidopsis thaliana HOM05D001568 ORTHO05D004404 1.5e-12 76.6 60 70.0
PGR142G4268 Punica granatum HOM05D001568 ORTHO05D004404 1.5e-12 76.6 60 75.0
Aa31LG8G6440 Aethionema arabicum HOM05D001568 ORTHO05D004404 1.9e-12 76.3 61 70.5
Sed0007286 Sechium edule HOM05D001568 ORTHO05D004404 1.9e-12 76.3 62 72.6
Lsat_1_v5_gn_9_113420 Lactuca sativa HOM05D001568 ORTHO05D004404 3.3e-12 75.5 59 72.9
BcaB06g26036 Brassica carinata HOM05D001568 ORTHO05D004404 9.5e-12 73.9 62 69.4
CARHR095120 Cardamine hirsuta HOM05D001568 ORTHO05D004404 9.5e-12 73.9 60 68.3
AUR62030863 Chenopodium quinoa HOM05D001568 ORTHO05D004404 1.2e-11 73.6 65 66.2
Nitab4.5_0010145g0040 Nicotiana tabacum HOM05D001568 ORTHO05D004404 1.2e-11 73.6 52 82.7
Sc08g0004350 Simmondsia chinensis HOM05D001568 ORTHO05D004404 1.6e-11 73.2 69 66.7
Aqoxy1G00264 Aquilegia oxysepala HOM05D001568 ORTHO05D004404 2.1e-11 72.8 57 66.7
Aqoxy335s003 Aquilegia oxysepala HOM05D001568 ORTHO05D004404 2.1e-11 72.8 57 66.7
A05p29940 Brassica napus HOM05D001568 ORTHO05D004404 2.1e-11 72.8 61 70.5
BraA05t21839Z Brassica rapa HOM05D001568 ORTHO05D004404 2.1e-11 72.8 61 70.5
BcaC05g28437 Brassica carinata HOM05D001568 ORTHO05D004404 2.8e-11 72.4 61 70.5
A01p35050 Brassica napus HOM05D001568 ORTHO05D004404 2.8e-11 72.4 61 67.2
C05p45170 Brassica napus HOM05D001568 ORTHO05D004404 2.8e-11 72.4 61 70.5
BolC5t33243H Brassica oleracea HOM05D001568 ORTHO05D004404 2.8e-11 72.4 61 70.5
BraA01t03586Z Brassica rapa HOM05D001568 ORTHO05D004404 2.8e-11 72.4 61 67.2
Lalb_Chr02g0144911 Lupinus albus HOM05D001568 ORTHO05D004404 1.1e-10 70.5 57 71.9
Prupe.3G242600 Prunus persica HOM05D001568 ORTHO05D004404 8.9e-10 67.4 58 65.5
EL10Ac9g22181 Beta vulgaris HOM05D001568 ORTHO05D004404 1.3e-08 63.5 57 68.4
VMungo1215G2526 Vigna mungo HOM05D001946 ORTHO05D002111 1.7e-08 63.2 68 63.2
Manes.02G064800 Manihot esculenta HOM05D001568 ORTHO05D004404 6.4e-08 61.2 54 64.8
EL10Ac9g22180 Beta vulgaris HOM05D001568 ORTHO05D004404 1.9e-07 59.7 73 56.2
Glyma.18G279700 Glycine max HOM05D001568 ORTHO05D004404 3.2e-07 58.9 54 64.8
Potri.017G109900 Populus trichocarpa HOM05D001568 ORTHO05D004404 4.1e-07 58.5 58 58.6
CSS0005518 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 5.4e-07 58.2 56 57.1
CSS0039733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 5.4e-07 58.2 56 57.1
Eucgr.I02108 Eucalyptus grandis HOM05D001568 ORTHO05D004404 5.4e-07 58.2 54 61.1
Phvul.008G021300 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 7.1e-07 57.8 54 63.0
QL02p053549 Quercus lobata HOM05D001568 ORTHO05D004404 7.1e-07 57.8 54 59.3
CiPaw.04G004300 Carya illinoinensis HOM05D001568 ORTHO05D004404 9.2e-07 57.4 52 63.5
Manes.01G107200 Manihot esculenta HOM05D001568 ORTHO05D004404 9.2e-07 57.4 58 60.3
TAR622G0735 Trochodendron aralioides HOM05D000764 ORTHO05D002006 9.2e-07 57.4 54 63.0
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 1.2e-06 57.0 54 61.1
Sabra17G0091900 Salix brachista HOM05D001568 ORTHO05D004404 1.2e-06 57.0 58 58.6
TAR371G0241 Trochodendron aralioides HOM05D001568 ORTHO05D004404 1.2e-06 57.0 54 61.1
Medtr7g019160 Medicago truncatula HOM05D001568 ORTHO05D004404 1.6e-06 56.6 54 61.1
SalBow1G1780 Salvia bowleyana HOM05D001568 ORTHO05D004404 2.7e-06 55.8 54 59.3
SalBow1G7911 Salvia bowleyana HOM05D001568 ORTHO05D004404 2.7e-06 55.8 54 59.3
FAN05G3918 Fragaria x ananassa HOM05D001568 ORTHO05D004404 3.5e-06 55.5 58 62.1
Nn3g17638 Nelumbo nucifera HOM05D001568 ORTHO05D004404 3.5e-06 55.5 54 59.3
RcHm_v2.0_Chr2g0163791 Rosa chinensis HOM05D001568 ORTHO05D004404 3.5e-06 55.5 56 60.7
TAR629G2968 Trochodendron aralioides HOM05D001568 ORTHO05D004404 3.5e-06 55.5 54 61.1
Lj1g0007549 Lotus japonicus HOM05D001568 ORTHO05D004404 4.6e-06 55.1 54 59.3
Potri.017G109800 Populus trichocarpa HOM05D001568 ORTHO05D004404 6.0e-06 54.7 54 59.3
Glyma.19G042000 Glycine max HOM05D001568 ORTHO05D004404 7.8e-06 54.3 55 58.2


User provided reference genes

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