Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 2.2e-81 305.4 144 100.0
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 9.7e-77 290.0 142 95.1
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 1.4e-70 269.6 142 88.0
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 5.2e-70 267.7 140 89.3
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 8.8e-70 266.9 143 88.1
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 5.7e-69 264.2 145 86.2
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 1.1e-64 250.0 142 81.7
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 1.6e-63 246.1 142 78.9
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 8.0e-63 243.8 142 76.1
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 1.0e-62 243.4 142 76.8
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 1.4e-62 243.0 142 76.8
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 5.2e-62 241.1 143 74.8
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 5.2e-62 241.1 142 75.4
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 5.2e-62 241.1 141 75.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 6.8e-62 240.7 142 78.2
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 9.8e-61 236.9 143 77.6
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 9.8e-61 236.9 143 76.2
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 1.7e-60 236.1 137 75.9
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.7e-60 236.1 142 73.9
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 2.8e-60 235.3 142 76.1
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 3.7e-60 235.0 143 76.9
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 4.9e-60 234.6 142 75.4
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 6.3e-60 234.2 142 77.5
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 6.3e-60 234.2 142 75.4
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 8.3e-60 233.8 142 77.5
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 8.3e-60 233.8 142 77.5
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 8.3e-60 233.8 144 76.4
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 8.3e-60 233.8 143 75.5
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 2.4e-59 232.3 143 73.4
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 2.4e-59 232.3 142 73.2
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 2.4e-59 232.3 145 73.1
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 3.1e-59 231.9 144 75.7
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 4.1e-59 231.5 142 74.6
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 7.0e-59 230.7 143 73.4
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 7.0e-59 230.7 142 74.6
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 7.0e-59 230.7 142 76.8
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 9.2e-59 230.3 142 76.1
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 9.2e-59 230.3 142 76.1
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 9.2e-59 230.3 142 76.1
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 9.2e-59 230.3 141 73.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.2e-58 229.9 142 71.8
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 1.6e-58 229.6 140 74.3
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 2.0e-58 229.2 143 76.2
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.0e-58 229.2 143 76.9
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 2.0e-58 229.2 144 75.0
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 3.5e-58 228.4 145 71.7
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 1.0e-57 226.9 143 72.7
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 1.3e-57 226.5 142 75.4
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 1.7e-57 226.1 144 75.0
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 5.0e-57 224.6 145 72.4
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 5.0e-57 224.6 145 72.4
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 8.6e-57 223.8 142 70.4
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 8.6e-57 223.8 137 75.9
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.5e-56 223.0 147 72.1
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.5e-56 223.0 145 71.7
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 1.9e-56 222.6 144 70.1
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 2.5e-56 222.2 137 74.5
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 2.5e-56 222.2 142 75.4
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 4.3e-56 221.5 142 74.6
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 4.3e-56 221.5 144 70.8
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 4.3e-56 221.5 144 73.6
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 5.6e-56 221.1 148 68.9
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 9.5e-56 220.3 146 70.5
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 9.5e-56 220.3 144 72.9
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 1.2e-55 219.9 142 74.6
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 1.6e-55 219.5 144 74.3
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 2.1e-55 219.2 148 70.9
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 3.6e-55 218.4 147 68.0
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 4.7e-55 218.0 142 72.5
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 4.7e-55 218.0 144 70.8
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 6.1e-55 217.6 131 75.6
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 6.1e-55 217.6 142 68.3
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 1.0e-54 216.9 144 72.2
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.4e-54 216.5 136 71.3
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 1.5e-53 213.0 143 70.6
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 1.5e-53 213.0 141 70.2
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 1.7e-52 209.5 142 71.1
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 1.7e-52 209.5 142 71.1
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 6.4e-52 207.6 135 70.4
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 4.1e-51 204.9 137 72.3
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 4.1e-51 204.9 140 68.6
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 4.1e-51 204.9 137 69.3
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 9.2e-51 203.8 137 72.3
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 2.0e-50 202.6 137 72.3
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 4.6e-50 201.4 144 68.1
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 3.4e-45 185.3 144 63.2
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.4e-45 184.9 144 63.2
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 5.4e-43 177.9 131 62.6
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 1.6e-42 176.4 141 57.4
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 4.6e-42 174.9 95 88.4
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.0e-41 173.7 151 58.3
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 5.0e-41 171.4 135 60.7
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 9.5e-40 167.2 107 70.1
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 3.6e-39 165.2 133 57.9
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 8.1e-39 164.1 138 53.6
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 1.1e-38 163.7 147 56.5
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 2.3e-38 162.5 142 54.9
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 1.1e-35 153.7 134 55.2
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 2.4e-35 152.5 133 55.6
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 6.0e-34 147.9 97 71.1
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 1.0e-33 147.1 144 53.5
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.3e-33 146.7 97 70.1
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 2.3e-33 146.0 133 53.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 3.0e-33 145.6 142 51.4
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 4.7e-31 138.3 97 69.1
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.0e-25 120.6 138 47.1
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 4.7e-23 111.7 108 53.7
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 1.7e-20 103.2 164 37.2
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 2.2e-20 102.8 82 62.2
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 2.2e-20 102.8 103 52.4
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 5.1e-17 91.7 73 58.9
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 1.9e-16 89.7 157 36.9
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 4.2e-11 72.0 102 39.2
Cfa026913 Carpinus fangiana HOM05D001568 ORTHO05D009161 6.2e-07 58.2 186 26.3


User provided reference genes

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