Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 5.8e-122 441.0 243 100.0
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 9.9e-98 360.5 240 85.0
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 3.2e-88 328.9 241 78.4
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.1e-87 326.2 241 78.0
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 1.1e-85 320.5 241 77.2
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 1.6e-63 246.9 245 65.3
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 8.5e-49 198.0 254 53.5
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 2.8e-44 183.0 212 56.1
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 1.6e-39 167.2 189 58.2
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 3.6e-39 166.0 208 52.9
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 4.7e-39 165.6 219 51.6
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 1.5e-37 160.6 204 52.9
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.3e-36 157.5 243 48.1
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 2.2e-36 156.8 194 53.1
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.7e-36 156.0 245 46.9
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 6.3e-36 155.2 251 45.8
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 4.1e-35 152.5 254 44.5
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 5.3e-35 152.1 254 45.3
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.0e-34 150.2 245 45.7
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 2.7e-34 149.8 213 49.8
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 5.9e-34 148.7 242 45.9
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.3e-33 147.5 254 43.7
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 2.2e-33 146.7 211 48.3
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.2e-33 146.7 112 76.8
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 2.2e-33 146.7 129 65.1
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 2.2e-33 146.7 227 46.7
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 2.9e-33 146.4 234 45.3
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.9e-33 146.4 232 46.6
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 3.8e-33 146.0 265 44.5
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 5.0e-33 145.6 216 48.6
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.9e-32 143.7 198 49.0
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 7.2e-32 141.7 265 42.6
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 7.2e-32 141.7 212 50.5
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.6e-31 140.6 166 56.0
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 2.1e-31 140.2 266 44.0
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.1e-31 140.2 238 45.4
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 2.7e-31 139.8 177 49.7
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 3.6e-31 139.4 243 42.4
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 8.0e-31 138.3 242 45.5
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 8.0e-31 138.3 184 50.5
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.4e-30 137.5 232 46.6
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.4e-30 137.5 222 46.8
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 1.4e-30 137.5 192 50.0
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.8e-30 137.1 167 52.1
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 1.8e-30 137.1 266 44.0
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 5.2e-30 135.6 216 48.1
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.2e-29 134.4 215 44.7
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.5e-29 134.0 265 43.4
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 1.5e-29 134.0 148 56.8
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 3.4e-29 132.9 168 48.2
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 3.4e-29 132.9 148 53.4
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 4.4e-29 132.5 168 55.4
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 9.8e-29 131.3 196 47.4
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.7e-28 130.6 236 42.8
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 2.2e-28 130.2 212 46.2
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 2.8e-28 129.8 238 39.5
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.8e-28 129.8 160 55.0
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 6.3e-28 128.6 239 43.9
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 6.3e-28 128.6 188 48.4
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.1e-27 127.9 190 48.9
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.1e-27 127.9 198 45.5
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.4e-27 127.5 171 50.3
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 1.4e-27 127.5 171 51.5
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 5.4e-27 125.6 216 42.1
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 9.1e-27 124.8 171 53.2
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 2.0e-26 123.6 217 44.7
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 3.5e-26 122.9 169 49.7
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.5e-26 122.5 239 43.5
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 5.9e-26 122.1 264 40.9
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 1.0e-25 121.3 208 43.8
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.0e-25 121.3 137 55.5
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.3e-25 120.9 203 42.9
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.3e-25 120.9 252 41.7
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 6.6e-25 118.6 188 43.1
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 6.6e-25 118.6 315 35.2
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 8.6e-25 118.2 202 42.6
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.1e-24 117.9 232 39.2
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 3.3e-24 116.3 232 39.2
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 4.2e-24 115.9 235 40.0
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 5.5e-24 115.5 236 40.3
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 7.2e-24 115.2 241 39.8
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 9.5e-24 114.8 241 38.2
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.2e-23 114.4 225 40.9
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 3.6e-23 112.8 221 39.4
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 3.6e-23 112.8 236 39.8
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 4.7e-23 112.5 225 40.4
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 4.7e-23 112.5 240 37.5
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 4.7e-23 112.5 119 53.8
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 6.1e-23 112.1 240 37.9
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 8.0e-23 111.7 228 39.5
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.3e-22 110.2 164 45.7
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 3.0e-22 109.8 242 35.1
CAN.G128.21 Capsicum annuum HOM05D005915 ORTHO05D007239 4.0e-22 109.4 90 71.1
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 5.2e-22 109.0 197 42.6
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 6.8e-22 108.6 118 55.1
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 1.5e-21 107.5 206 41.3
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 3.4e-21 106.3 230 37.4
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 4.4e-21 105.9 210 39.5
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.8e-20 103.2 142 48.6
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 5.4e-19 99.0 239 38.5
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 4.5e-18 95.9 116 50.0
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.5e-18 95.9 194 41.2
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 6.6e-17 92.0 96 58.3
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.5e-16 90.9 233 38.2
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.2e-15 87.8 152 45.4
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 3.6e-15 86.3 201 38.3
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 8.0e-15 85.1 156 44.9
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 1.4e-14 84.3 63 65.1
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 3.1e-14 83.2 205 37.6
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 9.8e-13 78.2 107 52.3
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.3e-12 77.8 213 37.1
Nitab4.5_0000130g0160 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.7e-12 77.4 157 42.7
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 3.7e-12 76.3 111 50.5
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 9.2e-11 71.6 215 32.1
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.2e-10 71.2 110 40.0
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 6.6e-09 65.5 91 48.4
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.1e-08 64.7 100 40.0
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.5e-08 63.5 103 43.7
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 7.3e-08 62.0 33 84.8
DCAR_016295 Daucus carota HOM05D005915 ORTHO05D007239 6.2e-07 58.9 129 42.6
Actinidia18238 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.1e-06 58.2 78 52.6
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 6.8e-06 55.5 43 58.1
Ah.05g171290 Amaranthus hybridus HOM05D005915 ORTHO05D007239 8.9e-06 55.1 106 44.3


User provided reference genes

Program Settings