Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.2e-52 209.5 106 100.0
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 5.4e-48 194.1 103 95.1
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 7.0e-48 193.7 106 89.6
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 1.6e-44 182.6 104 84.6
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 6.1e-44 180.6 104 82.7
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-43 179.5 104 82.7
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 8.8e-43 176.8 104 82.7
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.6e-42 175.3 103 83.5
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 3.4e-42 174.9 104 83.7
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 4.4e-42 174.5 104 84.6
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 4.4e-42 174.5 104 82.7
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 7.5e-42 173.7 104 82.7
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 9.8e-42 173.3 104 81.7
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 9.8e-42 173.3 104 81.7
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 9.8e-42 173.3 104 79.8
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 1.3e-41 172.9 104 81.7
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 2.8e-41 171.8 103 83.5
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 3.7e-41 171.4 104 81.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 4.9e-41 171.0 104 77.9
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 4.9e-41 171.0 104 78.8
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 6.3e-41 170.6 104 79.8
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 6.3e-41 170.6 104 81.7
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 8.3e-41 170.2 98 83.7
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 1.4e-40 169.5 103 82.5
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.4e-40 169.5 105 81.0
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.8e-40 169.1 104 76.9
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 3.1e-40 168.3 105 75.2
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 4.1e-40 167.9 104 81.7
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 4.1e-40 167.9 104 80.8
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 5.4e-40 167.5 103 76.7
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 5.4e-40 167.5 104 80.8
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 9.2e-40 166.8 103 79.6
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.2e-39 166.4 104 78.8
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 2.0e-39 165.6 104 78.8
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 2.7e-39 165.2 104 80.8
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 4.5e-39 164.5 105 76.2
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 4.5e-39 164.5 101 79.2
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 1.3e-38 162.9 101 79.2
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 2.3e-38 162.2 103 77.7
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 3.8e-38 161.4 103 76.7
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 6.6e-38 160.6 103 77.7
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 6.6e-38 160.6 104 76.0
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 6.6e-38 160.6 100 78.0
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 1.5e-37 159.5 103 78.6
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 2.5e-37 158.7 104 75.0
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 2.5e-37 158.7 103 75.7
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 3.3e-37 158.3 103 75.7
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 4.3e-37 157.9 94 80.9
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 4.3e-37 157.9 96 82.3
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 5.6e-37 157.5 104 76.9
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.6e-36 156.0 101 74.3
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 3.6e-36 154.8 99 75.8
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 3.6e-36 154.8 103 73.8
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 4.7e-36 154.5 103 75.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 6.1e-36 154.1 96 77.1
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 6.1e-36 154.1 103 73.8
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 6.1e-36 154.1 91 83.5
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 8.0e-36 153.7 89 83.1
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 1.4e-35 152.9 104 74.0
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.8e-35 152.5 104 76.9
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 2.3e-35 152.1 103 73.8
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 2.3e-35 152.1 102 70.6
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 4.0e-35 151.4 103 72.8
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 1.5e-34 149.4 94 76.6
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.5e-34 149.4 103 74.8
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 3.4e-34 148.3 97 73.2
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 9.8e-34 146.7 91 76.9
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.3e-33 146.4 98 70.4
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 1.3e-33 146.4 103 70.9
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 1.7e-33 146.0 91 76.9
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 2.9e-33 145.2 104 68.3
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 6.4e-33 144.1 91 75.8
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 6.4e-33 144.1 91 76.9
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.8e-32 142.5 90 75.6
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.8e-32 142.5 90 75.6
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.8e-32 142.5 90 75.6
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.8e-32 142.5 91 74.7
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 2.4e-32 142.1 99 67.7
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 7.0e-32 140.6 103 66.0
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 1.2e-31 139.8 91 74.7
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.6e-31 139.4 89 77.5
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 2.0e-31 139.0 91 72.5
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 5.9e-31 137.5 91 72.5
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 5.9e-31 137.5 90 72.2
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 7.8e-31 137.1 90 72.2
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.0e-30 136.7 91 71.4
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 1.3e-30 136.3 94 73.4
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.5e-29 132.1 82 81.7
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 7.3e-29 130.6 92 68.5
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 7.3e-29 130.6 93 67.7
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.6e-28 129.4 75 85.3
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 3.6e-28 128.3 75 84.0
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 2.3e-27 125.6 75 82.7
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 6.8e-27 124.0 75 81.3
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 7.5e-26 120.6 90 70.0
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 1.3e-25 119.8 75 77.3
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.3e-25 119.8 75 77.3
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 4.9e-25 117.9 98 58.2
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 6.4e-25 117.5 79 70.9
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 6.4e-25 117.5 77 76.6
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 4.6e-23 111.3 74 73.0
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 7.8e-23 110.5 74 73.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 8.6e-22 107.1 91 59.3
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 7.3e-21 104.0 63 77.8
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 9.5e-21 103.6 92 60.9
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 3.1e-19 98.6 77 62.3
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.2e-18 96.7 73 63.0
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 4.9e-17 91.3 99 48.5
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 4.9e-17 91.3 63 71.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.1e-16 90.1 100 52.0
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.2e-15 86.7 80 52.5
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 7.8e-15 84.0 76 55.3
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.3e-14 83.2 65 66.2
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 3.0e-14 82.0 85 47.1
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 4.3e-13 78.2 52 73.1
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 4.3e-13 78.2 90 46.7
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 3.1e-11 72.0 85 48.2
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 1.3e-06 56.6 39 61.5
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 2.3e-06 55.8 81 42.0


User provided reference genes

Program Settings