Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001439g0010 Nicotiana tabacum HOM05D003477 ORTHO05D004043 3.5e-46 188.0 98 100.0
Nitab4.5_0001119g0150 Nicotiana tabacum HOM05D003477 ORTHO05D004043 4.1e-42 174.5 98 90.8
Sopen02g037390 Solanum pennellii HOM05D003477 ORTHO05D004043 4.1e-42 174.5 98 90.8
Solyc02g092830.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 9.0e-42 173.3 97 90.7
PGSC0003DMG400024979 Solanum tuberosum HOM05D003477 ORTHO05D004043 2.0e-41 172.2 98 90.8
Peaxi162Scf00945g00014 Petunia axillaris HOM05D003477 ORTHO05D004043 8.8e-37 156.8 98 79.6
Actinidia16453 Actinidia chinensis HOM05D003477 ORTHO05D004043 1.7e-19 99.4 94 59.6
Actinidia21247 Actinidia chinensis HOM05D003477 ORTHO05D004043 1.7e-19 99.4 94 59.6
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.8e-18 95.9 98 57.1
Cc07_g06600 Coffea canephora HOM05D003477 ORTHO05D004043 3.1e-18 95.1 101 57.4
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 4.5e-17 91.3 103 54.4
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 7.7e-17 90.5 99 55.6
CSS0020585 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.8e-16 88.2 93 58.1
Ca_24733_v3 Cicer arietinum L. HOM05D002634 ORTHO05D003100 3.2e-15 85.1 93 53.8
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 2.1e-14 82.4 96 51.0
Lj2g0006602 Lotus japonicus HOM05D003477 ORTHO05D004043 2.1e-14 82.4 88 56.8
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 4.7e-14 81.3 106 49.1
Glyma.01G190500 Glycine max HOM05D003477 ORTHO05D004043 4.7e-14 81.3 90 53.3
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 6.1e-14 80.9 103 48.5
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 8.0e-14 80.5 92 46.7
QL06p040030 Quercus lobata HOM05D003477 ORTHO05D004043 1.0e-13 80.1 94 54.3
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.8e-13 79.3 98 51.0
ECA238G3264 Erigeron canadensis HOM05D003477 ORTHO05D004043 2.3e-13 79.0 95 48.4
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 2.3e-13 79.0 103 48.5
Prupe.6G226300 Prunus persica HOM05D003477 ORTHO05D004043 4.0e-13 78.2 87 50.6
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 6.8e-13 77.4 96 47.9
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 6.8e-13 77.4 92 50.0
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 6.8e-13 77.4 91 51.6
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 8.8e-13 77.0 96 49.0
Phvul.002G014500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 1.5e-12 76.3 94 53.2
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 2.6e-12 75.5 97 46.4
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 3.4e-12 75.1 94 48.9
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 3.4e-12 75.1 65 61.5
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 3.4e-12 75.1 104 49.0
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 4.4e-12 74.7 104 47.1
MD02G1179900 Malus domestica HOM05D003477 ORTHO05D004043 4.4e-12 74.7 88 48.9
Actinidia03815 Actinidia chinensis HOM05D003477 ORTHO05D004043 5.7e-12 74.3 82 53.7
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 5.7e-12 74.3 96 45.8
arahy.Tifrunner.gnm1.ann1.VE84TY Arachis hypogaea HOM05D003477 ORTHO05D004043 7.5e-12 73.9 92 51.1
Actinidia08244 Actinidia chinensis HOM05D003477 ORTHO05D004043 9.8e-12 73.6 84 52.4
DCAR_025766 Daucus carota HOM05D003477 ORTHO05D004043 9.8e-12 73.6 88 52.3
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 1.7e-11 72.8 100 48.0
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 1.7e-11 72.8 103 47.6
Medtr5g016330 Medicago truncatula HOM05D003477 ORTHO05D004043 1.7e-11 72.8 89 49.4
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 2.2e-11 72.4 96 46.9
Psat2g169360 Pisum sativum HOM05D003477 ORTHO05D004043 3.7e-11 71.6 91 49.5
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 4.8e-11 71.2 97 45.4
Lsat_1_v5_gn_2_85381 Lactuca sativa HOM05D003477 ORTHO05D004043 4.8e-11 71.2 103 44.7
Lalb_Chr05g0226121 Lupinus albus HOM05D003477 ORTHO05D004043 4.8e-11 71.2 90 51.1
Atru.chr3.235 Acer truncatum HOM05D003477 ORTHO05D004043 6.3e-11 70.9 89 48.3
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 6.3e-11 70.9 103 46.6
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 6.3e-11 70.9 97 43.3
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 6.3e-11 70.9 100 48.0
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 6.3e-11 70.9 94 51.1
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 8.3e-11 70.5 91 47.3
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 8.3e-11 70.5 104 46.2
Eucgr.H02262 Eucalyptus grandis HOM05D003477 ORTHO05D004043 1.4e-10 69.7 92 50.0
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 1.4e-10 69.7 89 48.3
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 1.4e-10 69.7 86 50.0
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 1.8e-10 69.3 100 47.0
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 1.8e-10 69.3 85 47.1
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 2.4e-10 68.9 92 44.6
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 3.1e-10 68.6 94 45.7
Actinidia00402 Actinidia chinensis HOM05D003477 ORTHO05D004043 4.1e-10 68.2 97 46.4
ATR0315G039 Amborella trichopoda HOM05D003477 ORTHO05D004043 4.1e-10 68.2 96 37.5
arahy.Tifrunner.gnm1.ann1.T63M72 Arachis hypogaea HOM05D003477 ORTHO05D004043 4.1e-10 68.2 88 51.1
Ciclev10027007m.g Citrus clementina HOM05D003477 ORTHO05D004043 4.1e-10 68.2 86 47.7
FAN23G2670 Fragaria x ananassa HOM05D003477 ORTHO05D004043 5.4e-10 67.8 87 49.4
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 9.1e-10 67.0 92 43.5
RcHm_v2.0_Chr2g0107061 Rosa chinensis HOM05D003477 ORTHO05D004043 9.1e-10 67.0 87 47.1
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.2e-09 66.6 102 43.1
FvH4_1g16960 Fragaria vesca HOM05D003477 ORTHO05D004043 1.2e-09 66.6 87 48.3
Lalb_Chr02g0145231 Lupinus albus HOM05D003477 ORTHO05D004043 1.2e-09 66.6 93 48.4
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 1.2e-09 66.6 110 43.6
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 1.2e-09 66.6 99 45.5
VMungo1215G1682 Vigna mungo HOM05D002634 ORTHO05D003100 1.2e-09 66.6 54 59.3
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 1.6e-09 66.2 101 44.6
FAN28G0243 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.6e-09 66.2 88 50.0
Lalb_Chr21g0308261 Lupinus albus HOM05D003477 ORTHO05D004043 1.6e-09 66.2 93 46.2
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 1.6e-09 66.2 93 49.5
vmacro01991 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 1.6e-09 66.2 97 46.4
Aa31LG2G16840 Aethionema arabicum HOM05D003477 ORTHO05D004043 2.0e-09 65.9 93 46.2
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 2.0e-09 65.9 78 46.2
AL3G46800 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 2.7e-09 65.5 61 57.4
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.7e-09 65.5 92 43.5
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 2.7e-09 65.5 105 44.8
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 3.5e-09 65.1 86 43.0
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 3.5e-09 65.1 100 44.0
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 4.5e-09 64.7 93 44.1
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 4.5e-09 64.7 93 46.2
BcaNung04163 Brassica carinata HOM05D003477 ORTHO05D004043 5.9e-09 64.3 52 61.5
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 5.9e-09 64.3 86 44.2
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 7.7e-09 63.9 95 46.3
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 7.7e-09 63.9 92 42.4
BcaC06g36034 Brassica carinata HOM05D003477 ORTHO05D004043 1.0e-08 63.5 61 55.7
Aa31LG8G13000 Aethionema arabicum HOM05D003477 ORTHO05D004043 1.3e-08 63.2 61 54.1
FAN26G2600 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.7e-08 62.8 85 48.2
AT2G15000 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 2.2e-08 62.4 62 54.8
EL10Ac6g15680 Beta vulgaris HOM05D003477 ORTHO05D004043 2.2e-08 62.4 92 40.2
C01p04520 Brassica napus HOM05D003477 ORTHO05D004043 2.2e-08 62.4 52 61.5
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 2.2e-08 62.4 86 41.9
FAN19G2238 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.2e-08 62.4 85 47.1
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 2.2e-08 62.4 95 44.2
Sp3g28420 Schrenkiella parvula HOM05D003477 ORTHO05D004043 2.2e-08 62.4 61 55.7
A03p45360 Brassica napus HOM05D003477 ORTHO05D004043 2.9e-08 62.0 53 60.4
BraA03t13668Z Brassica rapa HOM05D003477 ORTHO05D004043 2.9e-08 62.0 53 60.4
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 2.9e-08 62.0 85 43.5
GSVIVG01004713001 Vitis vinifera HOM05D006762 ORTHO05D003505 2.9e-08 62.0 92 46.7
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 2.9e-08 62.0 80 43.8
Gohir.A03G185500 Gossypium hirsutum HOM05D003477 ORTHO05D004043 3.8e-08 61.6 86 43.0
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 3.8e-08 61.6 105 42.9
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 3.8e-08 61.6 97 45.4
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 3.8e-08 61.6 100 44.0
A01p04150 Brassica napus HOM05D003477 ORTHO05D004043 5.0e-08 61.2 52 59.6
BolC1t00438H Brassica oleracea HOM05D003477 ORTHO05D004043 5.0e-08 61.2 52 59.6
BraA01t00404Z Brassica rapa HOM05D003477 ORTHO05D004043 5.0e-08 61.2 52 59.6
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 5.0e-08 61.2 90 41.1
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 5.0e-08 61.2 92 41.3
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 6.5e-08 60.8 82 46.3
Hma1.2p1_1023F.1_g249010 Hydrangea macrophylla HOM05D003477 ORTHO05D004043 6.5e-08 60.8 86 50.0
BcaC01g03075 Brassica carinata HOM05D003477 ORTHO05D004043 8.5e-08 60.5 53 60.4
BcaC01g03076 Brassica carinata HOM05D003477 ORTHO05D004043 8.5e-08 60.5 53 60.4
C03p56260 Brassica napus HOM05D003477 ORTHO05D004043 8.5e-08 60.5 53 60.4
BolC3t17914H Brassica oleracea HOM05D003477 ORTHO05D004043 8.5e-08 60.5 53 60.4
CARHR105430 Cardamine hirsuta HOM05D003477 ORTHO05D004043 1.1e-07 60.1 100 41.0
FAN04G0434 Fragaria x ananassa HOM05D006762 ORTHO05D003505 1.1e-07 60.1 96 44.8
FAN13G0097 Fragaria x ananassa HOM05D000502 ORTHO05D000356 1.1e-07 60.1 91 45.1
Gohir.D02G206836 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.1e-07 60.1 86 41.9
Manes.07G066700 Manihot esculenta HOM05D003477 ORTHO05D004043 1.1e-07 60.1 87 46.0
AL7G37400 Arabidopsis lyrata HOM05D006762 ORTHO05D003505 1.5e-07 59.7 84 48.8
FAN08G1018 Fragaria x ananassa HOM05D006762 ORTHO05D003505 1.5e-07 59.7 96 44.8
FAN18G2762 Fragaria x ananassa HOM05D006762 ORTHO05D003505 1.5e-07 59.7 96 44.8
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 1.5e-07 59.7 87 43.7
GSVIVG01006992001 Vitis vinifera HOM05D006762 ORTHO05D003505 1.5e-07 59.7 92 45.7
Aa31csc22G110 Aethionema arabicum HOM05D006762 ORTHO05D003505 3.2e-07 58.5 95 43.2
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 3.2e-07 58.5 93 41.9
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 3.2e-07 58.5 81 40.7
RcHm_v2.0_Chr7g0203511 Rosa chinensis HOM05D006762 ORTHO05D003505 3.2e-07 58.5 93 47.3
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 3.2e-07 58.5 83 45.8
Duzib248G0862 Durio zibethinus HOM05D003477 ORTHO05D004043 4.2e-07 58.2 86 44.2
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 4.2e-07 58.2 97 43.3
Aqoxy7G00783 Aquilegia oxysepala HOM05D006762 ORTHO05D003505 5.5e-07 57.8 53 56.6
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 5.5e-07 57.8 94 41.5
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 5.5e-07 57.8 93 41.9
Gohir.D12G021600 Gossypium hirsutum HOM05D003477 ORTHO05D004043 5.5e-07 57.8 86 39.5
Cpa.g.sc29.168 Carica papaya HOM05D006762 ORTHO05D003505 7.2e-07 57.4 102 44.1
Manes.10G075200 Manihot esculenta HOM05D003477 ORTHO05D004043 7.2e-07 57.4 87 44.8
PSO541G5514 Papaver somniferum HOM05D003477 ORTHO05D004043 9.4e-07 57.0 87 43.7
BcaC06g31382 Brassica carinata HOM05D006762 ORTHO05D003505 1.2e-06 56.6 101 42.6
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 1.2e-06 56.6 86 43.0
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 1.2e-06 56.6 86 43.0
Rhsim11G0157900 Rhododendron simsii HOM05D003477 ORTHO05D004043 1.2e-06 56.6 86 44.2
Sabra16G0215100 Salix brachista HOM05D006762 ORTHO05D003505 1.2e-06 56.6 94 44.7
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 1.6e-06 56.2 93 43.0
Carub.0003s2895 Capsella rubella HOM05D003477 ORTHO05D004043 2.1e-06 55.8 83 42.2
Thhalv10022939m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 2.1e-06 55.8 81 42.0
Sed0021400 Sechium edule HOM05D003477 ORTHO05D004043 2.1e-06 55.8 91 41.8
COL.COLO4_37166 Corchorus olitorius HOM05D006762 ORTHO05D003505 3.6e-06 55.1 47 57.4
Phvul.003G221200 Phaseolus vulgaris HOM05D006762 ORTHO05D003505 3.6e-06 55.1 88 40.9
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 3.6e-06 55.1 82 41.5
BcaC06g31384 Brassica carinata HOM05D006762 ORTHO05D003505 4.7e-06 54.7 101 43.6
Rhsim11G0156400 Rhododendron simsii HOM05D003477 ORTHO05D004043 4.7e-06 54.7 86 43.0
C02p48680 Brassica napus HOM05D006762 ORTHO05D003505 6.1e-06 54.3 101 43.6
BolC2t10960H Brassica oleracea HOM05D006762 ORTHO05D003505 6.1e-06 54.3 101 43.6
Glyma.18G192300 Glycine max HOM05D003477 ORTHO05D004043 6.1e-06 54.3 97 41.2
Lj4g0004620 Lotus japonicus HOM05D006762 ORTHO05D003505 6.1e-06 54.3 85 40.0
MD04G1063100 Malus domestica HOM05D006762 ORTHO05D003505 6.1e-06 54.3 94 43.6
Nitab4.5_0003699g0030 Nicotiana tabacum HOM05D003477 ORTHO05D004043 6.1e-06 54.3 85 43.5
Os02g0658300 Oryza sativa ssp. japonica HOM05D006762 ORTHO05D003505 6.1e-06 54.3 46 63.0
PSO675G3465 Papaver somniferum HOM05D003477 ORTHO05D004043 6.1e-06 54.3 85 44.7
BcaB08g34577 Brassica carinata HOM05D003477 ORTHO05D004043 8.0e-06 53.9 43 58.1
CiPaw.01G009400 Carya illinoinensis HOM05D003477 ORTHO05D004043 8.0e-06 53.9 95 42.1
Gohir.A12G021300 Gossypium hirsutum HOM05D003477 ORTHO05D004043 8.0e-06 53.9 86 38.4
Sp2g12170 Schrenkiella parvula HOM05D006762 ORTHO05D003505 8.0e-06 53.9 101 43.6


User provided reference genes

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