Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001437g0170 Nicotiana tabacum HOM05D002239 ORTHO05D002408 2.9e-41 171.4 84 100.0
Nitab4.5_0003774g0090 Nicotiana tabacum HOM05D002239 ORTHO05D002408 1.5e-32 142.5 99 76.8
Sopen11g003010 Solanum pennellii HOM05D002239 ORTHO05D002408 2.4e-19 98.6 93 62.4
Solyc11g007090.3 Solanum lycopersicum HOM05D002239 ORTHO05D002408 2.1e-18 95.5 93 60.2
Oeu025591.1 Olea europaea HOM05D002239 ORTHO05D002408 1.8e-14 82.4 93 55.9
Cc02_g09800 Coffea canephora HOM05D002239 ORTHO05D002408 4.9e-12 74.3 104 47.1
SGA_v2.0_scaffold295G47530 Striga asiatica HOM05D002239 ORTHO05D002408 2.4e-11 72.0 92 48.9
MSTRG.9087 Avicennia marina HOM05D002239 ORTHO05D002408 3.2e-11 71.6 97 50.5
Dinv09598 Davidia involucrata HOM05D002239 ORTHO05D002408 2.7e-10 68.6 93 49.5
Manes.10G058500 Manihot esculenta HOM05D002239 ORTHO05D002408 3.5e-10 68.2 85 47.1
Actinidia31102 Actinidia chinensis HOM05D002239 ORTHO05D002408 4.6e-10 67.8 94 50.0
TAR633G0917 Trochodendron aralioides HOM05D002239 ORTHO05D002408 6.0e-10 67.4 94 46.8
SalBow6G5383 Salvia bowleyana HOM05D002239 ORTHO05D002408 1.7e-09 65.9 94 48.9
Lsat_1_v5_gn_2_104640 Lactuca sativa HOM05D002239 ORTHO05D002408 1.1e-08 63.2 97 51.5
Lj3A928T55 Lonicera japonica HOM05D002239 ORTHO05D002408 3.3e-08 61.6 103 42.7
EL10Ac4g08662 Beta vulgaris HOM05D002239 ORTHO05D002408 4.3e-08 61.2 88 50.0
Haze_02516 Corylus avellana HOM05D002239 ORTHO05D002408 7.3e-08 60.5 79 50.6
C09p72140 Brassica napus HOM05D002239 ORTHO05D002408 1.2e-07 59.7 52 59.6
BolC9t59958H Brassica oleracea HOM05D002239 ORTHO05D002408 1.2e-07 59.7 52 59.6
Rhsim09G0142600 Rhododendron simsii HOM05D002239 ORTHO05D002408 1.2e-07 59.7 89 48.3
Thecc.10G106700 Theobroma cacao HOM05D002239 ORTHO05D002408 1.2e-07 59.7 90 43.3
GSVIVG01011279001 Vitis vinifera HOM05D002239 ORTHO05D002408 1.6e-07 59.3 85 50.6
CSS0012373 Camellia sinensis var. sinensis HOM05D002239 ORTHO05D002408 2.1e-07 58.9 86 48.8
Duzib106G1599 Durio zibethinus HOM05D002239 ORTHO05D002408 2.1e-07 58.9 86 41.9
Migut.F00908 Erythranthe guttata HOM05D002239 ORTHO05D002408 2.1e-07 58.9 98 39.8
CSS0035326 Camellia sinensis var. sinensis HOM05D002239 ORTHO05D002408 2.8e-07 58.5 86 48.8
Potri.008G021700 Populus trichocarpa HOM05D002239 ORTHO05D002408 2.8e-07 58.5 91 42.9
QL04p044850 Quercus lobata HOM05D002239 ORTHO05D002408 2.8e-07 58.5 90 44.4
Hund06777 Selenicereus undatus HOM05D002239 ORTHO05D002408 3.6e-07 58.2 78 48.7
MELO3C012356.2 Cucumis melo HOM05D002239 ORTHO05D002408 4.7e-07 57.8 88 44.3
CsaV3_5G035550 Cucumis sativus L. HOM05D002239 ORTHO05D002408 4.7e-07 57.8 88 44.3
CsaV3_7G016170 Cucumis sativus L. HOM05D002239 ORTHO05D002408 4.7e-07 57.8 88 44.3
TWI38G1828 Tripterygium wilfordii HOM05D002239 ORTHO05D002408 6.2e-07 57.4 83 44.6
Gohir.A13G010800 Gossypium hirsutum HOM05D002239 ORTHO05D002408 8.1e-07 57.0 73 49.3
Gohir.D12G103200 Gossypium hirsutum HOM05D002239 ORTHO05D002408 8.1e-07 57.0 65 50.8
Gorai.013G099300 Gossypium raimondii HOM05D002239 ORTHO05D002408 8.1e-07 57.0 65 50.8
Ciclev10031166m.g Citrus clementina HOM05D002239 ORTHO05D002408 1.4e-06 56.2 87 48.3
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 1.8e-06 55.8 92 44.6
Cfa011262 Carpinus fangiana HOM05D002239 ORTHO05D002408 3.1e-06 55.1 79 46.8
Peaxi162Scf00173g00520 Petunia axillaris HOM05D002239 ORTHO05D002408 3.1e-06 55.1 29 89.7
Cpa.g.sc183.8 Carica papaya HOM05D002239 ORTHO05D002408 4.0e-06 54.7 88 42.0
HanXRQChr11g0342211 Helianthus annuus HOM05D002239 ORTHO05D002408 5.2e-06 54.3 92 43.5
Nn6g34940 Nelumbo nucifera HOM05D002239 ORTHO05D002408 6.9e-06 53.9 83 42.2
CiPaw.13G038800 Carya illinoinensis HOM05D002239 ORTHO05D002408 9.0e-06 53.5 84 44.0
ClCG05G021720 Citrullus lanatus HOM05D002239 ORTHO05D002408 9.0e-06 53.5 88 46.6
FAN23G0440 Fragaria x ananassa HOM05D002239 ORTHO05D002408 9.0e-06 53.5 70 44.3
FAN23G0444 Fragaria x ananassa HOM05D002239 ORTHO05D002408 9.0e-06 53.5 70 44.3


User provided reference genes

Program Settings