Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.8e-126 455.3 231 100.0
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.0e-120 436.8 231 95.7
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.3e-104 382.5 234 83.3
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 3.0e-104 382.1 232 82.8
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 8.8e-104 380.6 232 82.3
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.2e-76 290.4 229 67.7
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.0e-72 277.3 189 72.0
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.2e-71 273.9 189 70.9
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.2e-71 273.9 226 65.0
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 3.4e-71 272.3 231 63.6
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.4e-71 271.9 233 64.8
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 7.5e-71 271.2 229 64.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 9.8e-71 270.8 224 63.8
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.3e-70 270.4 233 64.4
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 2.2e-70 269.6 229 62.0
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 3.7e-70 268.9 230 63.0
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 4.9e-70 268.5 191 71.7
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 8.3e-70 267.7 235 61.7
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 8.3e-70 267.7 222 66.2
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 8.3e-70 267.7 226 64.6
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.4e-69 266.9 230 63.9
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.4e-69 266.9 189 70.9
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.9e-69 266.5 187 71.1
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.4e-69 266.2 235 62.6
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 2.4e-69 266.2 217 64.1
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.4e-69 266.2 226 62.8
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 3.2e-69 265.8 195 69.7
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 4.1e-69 265.4 191 70.2
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 4.1e-69 265.4 191 70.2
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 9.2e-69 264.2 230 63.5
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 9.2e-69 264.2 187 72.7
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 9.2e-69 264.2 236 62.7
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.6e-68 263.5 171 77.2
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.0e-68 263.1 236 61.9
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 2.7e-68 262.7 188 71.3
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 2.7e-68 262.7 198 67.2
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 2.7e-68 262.7 193 69.9
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 2.7e-68 262.7 190 72.1
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 3.5e-68 262.3 229 63.3
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 3.5e-68 262.3 200 66.0
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 3.5e-68 262.3 237 62.0
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 4.6e-68 261.9 233 58.8
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 1.0e-67 260.8 219 63.5
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 3.0e-67 259.2 225 64.0
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 3.9e-67 258.8 208 64.9
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 1.5e-66 256.9 187 67.4
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.5e-66 256.1 228 61.4
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.5e-66 256.1 158 78.5
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 2.5e-66 256.1 184 70.1
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 3.3e-66 255.8 243 58.4
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.6e-66 255.0 172 73.8
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 5.6e-66 255.0 232 60.3
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 5.6e-66 255.0 188 70.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 7.3e-66 254.6 224 59.8
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 9.5e-66 254.2 157 78.3
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 9.5e-66 254.2 138 87.0
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.6e-65 253.4 192 67.2
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 2.1e-65 253.1 140 85.0
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.1e-65 253.1 172 74.4
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 3.6e-65 252.3 172 73.3
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 6.2e-65 251.5 182 72.5
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 6.2e-65 251.5 232 59.1
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 8.0e-65 251.1 139 84.9
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 3.1e-64 249.2 172 73.3
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 5.2e-64 248.4 229 58.5
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 5.2e-64 248.4 220 61.4
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 6.8e-64 248.1 194 63.9
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.5e-63 246.9 214 64.0
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.0e-63 246.5 186 66.7
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 3.4e-63 245.7 168 70.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 3.4e-63 245.7 144 81.2
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.4e-63 245.4 135 85.2
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 7.5e-63 244.6 138 80.4
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.3e-62 243.8 184 65.2
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 1.7e-62 243.4 149 77.2
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 3.7e-62 242.3 137 81.8
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 3.7e-62 242.3 227 59.5
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.9e-61 240.0 134 83.6
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.4e-61 239.6 195 60.5
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.4e-61 239.6 195 60.5
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 3.2e-61 239.2 231 60.2
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 3.5e-60 235.7 134 82.1
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 7.8e-60 234.6 158 71.5
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 7.8e-60 234.6 158 71.5
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 3.9e-59 232.3 172 65.1
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 3.9e-59 232.3 148 74.3
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 6.6e-59 231.5 211 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.1e-58 230.7 171 65.5
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.5e-58 229.6 129 83.7
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 5.6e-58 228.4 190 60.0
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 9.5e-58 227.6 128 84.4
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.1e-57 226.5 130 82.3
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.7e-54 216.9 161 64.6
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 4.1e-53 212.2 159 64.2
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 2.1e-49 199.9 138 65.9
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.4e-45 187.2 95 87.4
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 7.8e-44 181.4 90 90.0
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 3.0e-43 179.5 167 61.1
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.1e-40 171.0 130 61.5
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.6e-39 166.4 223 45.3
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 7.6e-39 164.9 157 51.0
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 1.6e-36 157.1 186 48.9
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 6.0e-36 155.2 252 43.7
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.5e-34 150.6 138 55.8
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.6e-33 147.1 168 54.2
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.1e-33 146.7 72 87.5
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 9.0e-32 141.4 106 67.0
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 4.5e-31 139.0 76 88.2
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.2e-30 136.7 110 67.3
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 9.3e-29 131.3 76 78.9
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 7.9e-28 128.3 94 71.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.8e-25 119.8 66 78.8
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 8.4e-22 108.2 56 83.9


User provided reference genes

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