Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001433g0080 Nicotiana tabacum HOM05D003267 ORTHO05D021886 6.3e-41 170.2 81 100.0
Nitab4.5_0000001g0310 Nicotiana tabacum HOM05D003267 ORTHO05D003955 8.6e-30 133.3 69 88.4
Nitab4.5_0001093g0040 Nicotiana tabacum HOM05D003267 ORTHO05D003955 8.6e-30 133.3 69 88.4
Peaxi162Scf00071g00134 Petunia axillaris HOM05D003267 ORTHO05D003955 1.7e-25 119.0 67 80.6
Atru.chr12.1498 Acer truncatum HOM05D003267 ORTHO05D003955 2.2e-25 118.6 69 78.3
VMungo1383G0366 Vigna mungo HOM05D003267 ORTHO05D003955 2.9e-25 118.2 69 76.8
CSS0009396 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 3.7e-25 117.9 69 79.7
CSS0023239 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 3.7e-25 117.9 69 79.7
Manes.08G105800 Manihot esculenta HOM05D003267 ORTHO05D003955 6.4e-25 117.1 69 79.7
Oeu002651.2 Olea europaea HOM05D003267 ORTHO05D003955 6.4e-25 117.1 69 76.8
Oeu033227.1 Olea europaea HOM05D003267 ORTHO05D003955 6.4e-25 117.1 69 76.8
Peaxi162Scf00194g00520 Petunia axillaris HOM05D003267 ORTHO05D003955 6.4e-25 117.1 67 79.1
arahy.Tifrunner.gnm1.ann1.23D8N6 Arachis hypogaea HOM05D003267 ORTHO05D003955 8.3e-25 116.7 69 75.4
arahy.Tifrunner.gnm1.ann1.X07PWR Arachis hypogaea HOM05D003267 ORTHO05D003955 8.3e-25 116.7 69 75.4
Psat0s4029g0080 Pisum sativum HOM05D003267 ORTHO05D003955 8.3e-25 116.7 69 76.8
Ca_09264_v3 Cicer arietinum L. HOM05D003267 ORTHO05D003955 1.4e-24 115.9 69 76.8
Lj5C313G5 Lonicera japonica HOM05D003267 ORTHO05D003955 1.4e-24 115.9 69 76.8
Lj1g0010587 Lotus japonicus HOM05D003267 ORTHO05D003955 1.4e-24 115.9 69 76.8
Lalb_Chr07g0193041 Lupinus albus HOM05D003267 ORTHO05D003955 1.4e-24 115.9 69 75.4
Medtr7g111160 Medicago truncatula HOM05D003267 ORTHO05D003955 1.4e-24 115.9 69 76.8
ECA234G4544 Erigeron canadensis HOM05D006915 ORTHO05D003955 1.8e-24 115.5 70 77.1
TPR.G8397 Trifolium pratense HOM05D003267 ORTHO05D003955 1.8e-24 115.5 69 76.8
unitig_26.g9012 Utricularia gibba HOM05D003267 ORTHO05D003955 1.8e-24 115.5 67 76.1
Ciclev10028530m.g Citrus clementina HOM05D003267 ORTHO05D003955 2.4e-24 115.2 69 76.8
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 2.4e-24 115.2 69 76.8
Glyma.03G226700 Glycine max HOM05D003267 ORTHO05D003955 2.4e-24 115.2 69 75.4
Phvul.001G220600 Phaseolus vulgaris HOM05D003267 ORTHO05D003955 2.4e-24 115.2 69 75.4
SGA_v2.0_scaffold131G34450 Striga asiatica HOM05D003267 ORTHO05D003955 2.4e-24 115.2 69 76.8
Nitab4.5_0004090g0130 Nicotiana tabacum HOM05D003267 ORTHO05D003955 3.2e-24 114.8 67 77.6
Nitab4.5_0004889g0020 Nicotiana tabacum HOM05D003267 ORTHO05D003955 3.2e-24 114.8 67 77.6
Sed0022970 Sechium edule HOM05D003267 ORTHO05D003955 3.2e-24 114.8 69 73.9
TWI12G0658 Tripterygium wilfordii HOM05D003267 ORTHO05D003955 3.2e-24 114.8 69 76.8
Hma1.2p1_0052F.1_g030220 Hydrangea macrophylla HOM05D003267 ORTHO05D003955 4.1e-24 114.4 69 75.4
Prupe.6G302000 Prunus persica HOM05D003267 ORTHO05D003955 4.1e-24 114.4 69 75.4
Cfa004400 Carpinus fangiana HOM05D003267 ORTHO05D003955 5.4e-24 114.0 69 75.4
Haze_15005 Corylus avellana HOM05D003267 ORTHO05D003955 5.4e-24 114.0 69 75.4
Lj9A239T58 Lonicera japonica HOM05D003267 ORTHO05D003955 5.4e-24 114.0 69 75.4
QL03p011428 Quercus lobata HOM05D003267 ORTHO05D003955 5.4e-24 114.0 69 75.4
Cc02_g36900 Coffea canephora HOM05D003267 ORTHO05D003955 7.0e-24 113.6 69 75.4
COL.COLO4_05471 Corchorus olitorius HOM05D003267 ORTHO05D003955 7.0e-24 113.6 69 73.9
CSS0001783 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 9.2e-24 113.2 69 75.4
CSS0029776 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 9.2e-24 113.2 69 75.4
Cpa.g.sc19.30 Carica papaya HOM05D003267 ORTHO05D003955 9.2e-24 113.2 69 75.4
Dinv30962 Davidia involucrata HOM05D003267 ORTHO05D003955 9.2e-24 113.2 69 76.8
HanXRQChr10g0293521 Helianthus annuus HOM05D003267 ORTHO05D003955 9.2e-24 113.2 69 76.8
Actinidia17726 Actinidia chinensis HOM05D003267 ORTHO05D003955 1.2e-23 112.8 69 73.9
Aqoxy5G02882 Aquilegia oxysepala HOM05D003267 ORTHO05D003955 1.2e-23 112.8 69 73.9
Duzib177G0095 Durio zibethinus HOM05D003267 ORTHO05D003955 1.2e-23 112.8 69 73.9
Thecc.05G331700 Theobroma cacao HOM05D003267 ORTHO05D003955 1.2e-23 112.8 69 73.9
GSVIVG01005282001 Vitis vinifera HOM05D003267 ORTHO05D003955 1.2e-23 112.8 69 73.9
Actinidia01652 Actinidia chinensis HOM05D003267 ORTHO05D003955 1.6e-23 112.5 66 78.8
ClCG02G014560 Citrullus lanatus HOM05D003267 ORTHO05D003955 1.6e-23 112.5 69 73.9
MELO3C004140.2 Cucumis melo HOM05D003267 ORTHO05D003955 1.6e-23 112.5 69 73.9
CsaV3_2G007450 Cucumis sativus L. HOM05D003267 ORTHO05D003955 1.6e-23 112.5 69 73.9
Duzib128G1544 Durio zibethinus HOM05D003267 ORTHO05D003955 1.6e-23 112.5 69 72.5
Oeu061913.1 Olea europaea HOM05D003267 ORTHO05D003955 1.6e-23 112.5 69 75.4
THA.LOC104818769 Tarenaya hassleriana HOM05D003267 ORTHO05D003955 1.6e-23 112.5 69 71.0
Actinidia22843 Actinidia chinensis HOM05D003267 ORTHO05D003955 2.7e-23 111.7 66 77.3
THA.LOC104802767 Tarenaya hassleriana HOM05D003267 ORTHO05D003955 2.7e-23 111.7 69 71.0
Gohir.A11G275900 Gossypium hirsutum HOM05D003267 ORTHO05D003955 3.5e-23 111.3 69 72.5
Gohir.D11G286300 Gossypium hirsutum HOM05D003267 ORTHO05D003955 3.5e-23 111.3 69 72.5
Gorai.007G309700 Gossypium raimondii HOM05D003267 ORTHO05D003955 3.5e-23 111.3 69 72.5
Hma1.2p1_0157F.1_g069480 Hydrangea macrophylla HOM05D003267 ORTHO05D003955 3.5e-23 111.3 69 73.9
Nn4g25260 Nelumbo nucifera HOM05D003267 ORTHO05D003955 3.5e-23 111.3 67 76.1
Migut.B00681 Erythranthe guttata HOM05D003267 ORTHO05D003955 4.6e-23 110.9 69 72.5
Eucgr.B01358 Eucalyptus grandis HOM05D003267 ORTHO05D003955 4.6e-23 110.9 69 71.0
Lsat_1_v5_gn_5_101940 Lactuca sativa HOM05D003267 ORTHO05D003955 4.6e-23 110.9 72 72.2
MBI18_g03886_MAGBIO Magnolia biondii HOM05D003267 ORTHO05D003955 4.6e-23 110.9 69 72.5
Migut.N00992 Erythranthe guttata HOM05D003267 ORTHO05D003955 5.9e-23 110.5 69 73.9
MD04G1183500 Malus domestica HOM05D003267 ORTHO05D003955 5.9e-23 110.5 69 73.9
Sed0000167 Sechium edule HOM05D003267 ORTHO05D003955 5.9e-23 110.5 70 72.9
Solyc01g102480.3 Solanum lycopersicum HOM05D003267 ORTHO05D003955 5.9e-23 110.5 67 74.6
Sopen01g044920 Solanum pennellii HOM05D003267 ORTHO05D003955 5.9e-23 110.5 67 74.6
PGSC0003DMG400018231 Solanum tuberosum HOM05D003267 ORTHO05D003955 5.9e-23 110.5 67 74.6
vmacro01648 Vaccinium macrocarpon HOM05D003267 ORTHO05D003955 5.9e-23 110.5 66 77.3
CiPaw.02G000200 Carya illinoinensis HOM05D003267 ORTHO05D003955 7.8e-23 110.2 69 72.5
Lalb_Chr06g0167191 Lupinus albus HOM05D003267 ORTHO05D003955 7.8e-23 110.2 69 71.0
Rhsim11G0111200 Rhododendron simsii HOM05D003267 ORTHO05D003955 7.8e-23 110.2 66 77.3
RcHm_v2.0_Chr3g0459061 Rosa chinensis HOM05D003267 ORTHO05D003955 7.8e-23 110.2 69 72.5
MSTRG.27901 Avicennia marina HOM05D003267 ORTHO05D003955 1.0e-22 109.8 69 72.5
Rhsim05G0117100 Rhododendron simsii HOM05D003267 ORTHO05D003955 1.0e-22 109.8 70 75.7
Sc23g0003840 Simmondsia chinensis HOM05D003267 ORTHO05D003955 1.0e-22 109.8 69 72.5
FvH4_6g08800 Fragaria vesca HOM05D003267 ORTHO05D003955 1.3e-22 109.4 69 72.5
Lj5g0007569 Lotus japonicus HOM05D003267 ORTHO05D003955 1.3e-22 109.4 70 72.9
Rhsim05G0116900 Rhododendron simsii HOM05D003267 ORTHO05D003955 1.3e-22 109.4 70 75.7
PSO761G0395 Papaver somniferum HOM05D003267 ORTHO05D003955 1.7e-22 109.0 68 75.0
Phvul.007G207100 Phaseolus vulgaris HOM05D003267 ORTHO05D003955 2.3e-22 108.6 69 71.0
vmacro19805 Vaccinium macrocarpon HOM05D003267 ORTHO05D003955 2.3e-22 108.6 70 74.3
MD12G1196900 Malus domestica HOM05D003267 ORTHO05D003955 3.0e-22 108.2 69 72.5
EL10Ac6g15325 Beta vulgaris HOM05D003267 ORTHO05D003955 3.9e-22 107.8 69 69.6
TAR365G0992 Trochodendron aralioides HOM05D003267 ORTHO05D003955 3.9e-22 107.8 66 74.2
MSTRG.20347 Avicennia marina HOM05D003267 ORTHO05D003955 5.0e-22 107.5 69 73.9
CAN.G1379.38 Capsicum annuum HOM05D003267 ORTHO05D003955 5.0e-22 107.5 68 75.0
Glyma.10G141000 Glycine max HOM05D003267 ORTHO05D003955 5.0e-22 107.5 71 71.8
Glyma.20G089700 Glycine max HOM05D003267 ORTHO05D003955 5.0e-22 107.5 71 71.8
FAN05G5115 Fragaria x ananassa HOM05D003267 ORTHO05D003955 6.6e-22 107.1 69 71.0
Glyma.19G223700 Glycine max HOM05D003267 ORTHO05D003955 6.6e-22 107.1 69 71.0
HanXRQChr16g0518801 Helianthus annuus HOM05D003267 ORTHO05D003955 6.6e-22 107.1 71 73.2
PGR031G3159 Punica granatum HOM05D003267 ORTHO05D003955 6.6e-22 107.1 69 71.0
CDE05G1830 Ceratophyllum demersum HOM05D003267 ORTHO05D003955 8.6e-22 106.7 69 69.6
CDE11G0971 Ceratophyllum demersum HOM05D003267 ORTHO05D003955 8.6e-22 106.7 69 69.6
PSO210G5864 Papaver somniferum HOM05D003267 ORTHO05D003955 8.6e-22 106.7 68 73.5
Hund12702 Selenicereus undatus HOM05D003267 ORTHO05D003955 8.6e-22 106.7 69 69.6
Ah.03g147760 Amaranthus hybridus HOM05D003267 ORTHO05D003955 1.1e-21 106.3 69 71.0
ECA236G4154 Erigeron canadensis HOM05D003267 ORTHO05D003955 1.5e-21 105.9 71 71.8
CANSAT54G1010 Cannabis sativa HOM05D003267 ORTHO05D003955 1.9e-21 105.5 70 71.4
AUR62003552 Chenopodium quinoa HOM05D003267 ORTHO05D003955 1.9e-21 105.5 69 68.1
AUR62017866 Chenopodium quinoa HOM05D003267 ORTHO05D003955 1.9e-21 105.5 69 68.1
Potri.005G000600 Populus trichocarpa HOM05D003267 ORTHO05D003955 2.5e-21 105.1 69 71.0
THA.LOC104822291 Tarenaya hassleriana HOM05D003267 ORTHO05D003955 3.3e-21 104.8 69 66.7
arahy.Tifrunner.gnm1.ann1.RKP3NC Arachis hypogaea HOM05D003267 ORTHO05D003955 4.3e-21 104.4 69 71.0
arahy.Tifrunner.gnm1.ann1.X4I5LU Arachis hypogaea HOM05D003267 ORTHO05D003955 4.3e-21 104.4 69 71.0
Sopen01g044890 Solanum pennellii HOM05D003267 ORTHO05D003955 4.3e-21 104.4 67 70.1
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 4.3e-21 104.4 70 70.0
Aa31LG5G16380 Aethionema arabicum HOM05D003267 ORTHO05D003955 7.3e-21 103.6 66 68.2
MSTRG.5177 Avicennia marina HOM05D003267 ORTHO05D003955 7.3e-21 103.6 69 68.1
Sabra05G0013400 Salix brachista HOM05D003267 ORTHO05D003955 7.3e-21 103.6 69 71.0
Hund04395 Selenicereus undatus HOM05D003267 ORTHO05D003955 7.3e-21 103.6 74 66.2
BcaB07g29962 Brassica carinata HOM05D003267 ORTHO05D003955 9.5e-21 103.2 70 70.0
BcaNung03960 Brassica carinata HOM05D003267 ORTHO05D003955 9.5e-21 103.2 70 70.0
Thhalv10004284m.g Eutrema salsugineum HOM05D003267 ORTHO05D003955 9.5e-21 103.2 70 70.0
Sp2g21400 Schrenkiella parvula HOM05D003267 ORTHO05D003955 9.5e-21 103.2 70 70.0
AL6G38390 Arabidopsis lyrata HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
AT5G26740 Arabidopsis thaliana HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
A02p39360 Brassica napus HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
C02p59090 Brassica napus HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
BolC2t11964H Brassica oleracea HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
BraA02t08901Z Brassica rapa HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
Carub.0006s2419 Capsella rubella HOM05D003267 ORTHO05D003955 1.2e-20 102.8 70 70.0
Eucgr.H01351 Eucalyptus grandis HOM05D003267 ORTHO05D003955 1.2e-20 102.8 69 69.6
Lsat_1_v5_gn_9_84121 Lactuca sativa HOM05D003267 ORTHO05D003955 1.6e-20 102.4 72 72.2
BcaNung02822 Brassica carinata HOM05D003267 ORTHO05D003955 2.1e-20 102.1 70 68.6
A06p36810 Brassica napus HOM05D003267 ORTHO05D003955 2.1e-20 102.1 70 68.6
C07p41680 Brassica napus HOM05D003267 ORTHO05D003955 2.1e-20 102.1 70 68.6
BolC7t44703H Brassica oleracea HOM05D003267 ORTHO05D003955 2.1e-20 102.1 70 68.6
BraA06t26607Z Brassica rapa HOM05D003267 ORTHO05D003955 2.1e-20 102.1 70 68.6
Zm00001eb063290 Zea mays HOM05D003267 ORTHO05D003955 2.1e-20 102.1 68 70.6
CARHR186990 Cardamine hirsuta HOM05D003267 ORTHO05D003955 2.8e-20 101.7 70 68.6
Thhalv10020796m.g Eutrema salsugineum HOM05D003267 ORTHO05D003955 2.8e-20 101.7 66 66.7
BcaC05g30076 Brassica carinata HOM05D003267 ORTHO05D003955 3.6e-20 101.3 66 66.7
A05p42110 Brassica napus HOM05D003267 ORTHO05D003955 3.6e-20 101.3 66 66.7
C05p61320 Brassica napus HOM05D003267 ORTHO05D003955 3.6e-20 101.3 66 66.7
BolC5t34791H Brassica oleracea HOM05D003267 ORTHO05D003955 3.6e-20 101.3 66 66.7
BraA05t22929Z Brassica rapa HOM05D003267 ORTHO05D003955 3.6e-20 101.3 66 66.7
DCAR_003255 Daucus carota HOM05D003267 ORTHO05D003955 3.6e-20 101.3 67 68.7
Hund23017 Selenicereus undatus HOM05D003267 ORTHO05D003955 3.6e-20 101.3 65 69.2
MBI18_g28943_MAGBIO Magnolia biondii HOM05D003267 ORTHO05D003955 4.7e-20 100.9 67 68.7
Zm00001eb211390 Zea mays HOM05D003267 ORTHO05D003955 6.2e-20 100.5 68 67.6
CARHR080430 Cardamine hirsuta HOM05D003267 ORTHO05D003955 8.0e-20 100.1 66 68.2
Actinidia11705 Actinidia chinensis HOM05D003267 ORTHO05D003955 1.1e-19 99.8 69 69.6
ATR0693G156 Amborella trichopoda HOM05D003267 ORTHO05D003955 1.8e-19 99.0 69 66.7
BcaC03g17868 Brassica carinata HOM05D003267 ORTHO05D003955 2.3e-19 98.6 71 66.2
DCAR_022330 Daucus carota HOM05D003267 ORTHO05D003955 2.3e-19 98.6 67 65.7
Sp3g04860 Schrenkiella parvula HOM05D003267 ORTHO05D003955 2.3e-19 98.6 66 65.2
Potri.005G000300 Populus trichocarpa HOM05D003267 ORTHO05D003955 3.1e-19 98.2 69 66.7
SHI18005 Sapria himalayana HOM05D003267 ORTHO05D003955 3.1e-19 98.2 69 66.7
AL3G16730 Arabidopsis lyrata HOM05D003267 ORTHO05D003955 4.0e-19 97.8 66 66.7
AT3G05940 Arabidopsis thaliana HOM05D003267 ORTHO05D003955 4.0e-19 97.8 66 66.7
HanXRQChr07g0193681 Helianthus annuus HOM05D003267 ORTHO05D003955 4.0e-19 97.8 75 65.3
unitig_22.g5794 Utricularia gibba HOM05D003267 ORTHO05D003955 8.9e-19 96.7 69 60.9
Carub.0003s0534 Capsella rubella HOM05D003267 ORTHO05D003955 1.2e-18 96.3 66 65.2
Nitab4.5_0003971g0010 Nicotiana tabacum HOM05D003267 ORTHO05D021886 2.0e-18 95.5 51 86.3
Os03g0827600 Oryza sativa ssp. japonica HOM05D003267 ORTHO05D003955 2.0e-18 95.5 69 65.2
Os07g0244300 Oryza sativa ssp. japonica HOM05D003267 ORTHO05D003955 1.7e-17 92.4 69 65.2
SEGI_26227 Sequoiadendron giganteum HOM05D003267 ORTHO05D003955 4.9e-17 90.9 69 65.2
HPP92_010911 Vanilla planifolia HOM05D003267 ORTHO05D003955 8.3e-17 90.1 58 70.7
HPP92_010916 Vanilla planifolia HOM05D003267 ORTHO05D003955 8.3e-17 90.1 58 70.7
Zm00001eb304160 Zea mays HOM05D003267 ORTHO05D003955 1.1e-16 89.7 69 63.8
DCAR_001878 Daucus carota HOM05D003267 ORTHO05D003955 5.4e-16 87.4 73 58.9
DCAR_029309 Daucus carota HOM05D003267 ORTHO05D003955 2.0e-15 85.5 63 68.3
BcaC04g23623 Brassica carinata HOM05D003267 ORTHO05D021886 2.3e-14 82.0 62 69.4
BolC9t53558H Brassica oleracea HOM05D003267 ORTHO05D021886 2.3e-14 82.0 62 69.4
Mapoly0177s0009 Marchantia polymorpha HOM05D003267 ORTHO05D003955 8.6e-14 80.1 77 48.1
SMO365G0052 Selaginella moellendorffii HOM05D003267 ORTHO05D003955 8.6e-14 80.1 62 62.9
C09p06390 Brassica napus HOM05D003267 ORTHO05D021886 1.5e-13 79.3 62 67.7
PGR119G1814 Punica granatum HOM05D003267 ORTHO05D003955 1.9e-13 79.0 48 72.9
Solyc01g102440.3 Solanum lycopersicum HOM05D003267 ORTHO05D021886 2.8e-12 75.1 49 69.4
SEGI_24145 Sequoiadendron giganteum HOM05D003267 ORTHO05D003955 6.2e-12 73.9 70 51.4
SMO334G0078 Selaginella moellendorffii HOM05D003267 ORTHO05D003955 2.6e-10 68.6 70 45.7
Pp3c7_6310 Physcomitrium patens HOM05D003267 ORTHO05D003955 4.4e-10 67.8 66 56.1
Aa31LG11G10050 Aethionema arabicum HOM05D003267 ORTHO05D003955 7.5e-10 67.0 70 52.9
CBR_g20293 Chara braunii HOM05D003267 ORTHO05D003955 6.4e-09 63.9 60 46.7
Pp3c1_20320 Physcomitrium patens HOM05D003267 ORTHO05D003955 8.3e-09 63.5 66 48.5
Pp3c11_20710 Physcomitrium patens HOM05D003267 ORTHO05D003955 7.1e-08 60.5 61 50.8


User provided reference genes

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