Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.5e-78 295.4 156 100.0
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.7e-74 282.7 156 95.5
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 1.5e-62 243.0 152 86.2
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 3.3e-62 241.9 152 85.5
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 7.3e-62 240.7 152 86.2
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 6.9e-60 234.2 153 86.3
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.7e-58 229.6 139 88.5
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.2e-51 206.8 153 71.9
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.3e-47 192.6 160 68.1
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 6.7e-47 191.0 129 77.5
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 2.5e-46 189.1 124 75.8
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 3.3e-46 188.7 189 57.7
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 7.4e-46 187.6 125 75.2
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.3e-45 186.8 155 68.4
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 2.8e-45 185.7 121 79.3
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 1.4e-44 183.3 123 80.5
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.8e-44 183.0 152 66.4
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.8e-44 183.0 158 66.5
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.8e-44 183.0 131 73.3
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 2.4e-44 182.6 129 76.0
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 3.1e-44 182.2 125 76.8
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 3.1e-44 182.2 115 80.0
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 3.1e-44 182.2 115 80.0
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 3.1e-44 182.2 123 75.6
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 6.9e-44 181.0 123 74.0
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 6.9e-44 181.0 158 66.5
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.2e-43 180.3 152 65.8
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 1.2e-43 180.3 118 81.4
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.2e-43 180.3 131 73.3
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.5e-43 179.9 123 74.0
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 2.6e-43 179.1 123 74.8
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 3.4e-43 178.7 119 79.0
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 3.4e-43 178.7 122 72.1
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 4.5e-43 178.3 154 66.2
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 5.8e-43 177.9 152 68.4
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 7.6e-43 177.6 125 74.4
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.3e-42 176.8 140 68.6
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 2.9e-42 175.6 124 75.8
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 2.9e-42 175.6 125 78.4
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 3.8e-42 175.3 122 78.7
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 4.9e-42 174.9 117 77.8
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 4.9e-42 174.9 152 67.1
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 4.9e-42 174.9 124 74.2
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 8.4e-42 174.1 140 67.9
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.1e-41 173.7 158 64.6
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 1.1e-41 173.7 119 74.8
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.9e-41 172.9 156 66.0
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 2.5e-41 172.6 126 77.8
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 4.2e-41 171.8 117 76.1
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 4.2e-41 171.8 169 58.6
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 4.2e-41 171.8 150 66.7
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 4.2e-41 171.8 152 63.8
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 7.1e-41 171.0 117 78.6
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 7.1e-41 171.0 119 77.3
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.1e-41 171.0 140 67.1
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 7.1e-41 171.0 140 68.6
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 7.1e-41 171.0 119 78.2
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 9.3e-41 170.6 121 78.5
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.2e-40 170.2 140 69.3
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.6e-40 169.9 119 78.2
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.6e-40 169.9 118 76.3
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.6e-40 169.9 132 70.5
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 3.5e-40 168.7 120 78.3
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 3.5e-40 168.7 132 72.7
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.6e-40 168.3 119 76.5
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 4.6e-40 168.3 121 76.9
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 4.6e-40 168.3 152 62.5
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 4.6e-40 168.3 127 74.0
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 6.0e-40 167.9 152 65.8
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 6.0e-40 167.9 117 76.1
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 7.9e-40 167.5 118 75.4
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.0e-39 167.2 120 77.5
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 1.0e-39 167.2 118 75.4
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.0e-39 167.2 160 65.0
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.0e-39 167.2 155 63.2
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.0e-39 167.2 132 68.9
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.3e-39 166.8 119 76.5
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 1.3e-39 166.8 128 68.8
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 1.3e-39 166.8 129 72.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.3e-39 166.0 116 74.1
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.0e-39 165.6 142 66.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 3.0e-39 165.6 149 63.8
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 3.9e-39 165.2 122 68.9
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 5.1e-39 164.9 120 76.7
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 5.1e-39 164.9 120 76.7
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 5.1e-39 164.9 141 66.7
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.1e-39 164.9 116 74.1
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 6.7e-39 164.5 150 62.7
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 6.7e-39 164.5 127 70.9
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 8.7e-39 164.1 136 69.1
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 8.7e-39 164.1 118 74.6
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 8.7e-39 164.1 116 75.0
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.1e-38 163.7 119 74.8
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 1.1e-38 163.7 153 62.1
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.9e-38 162.9 124 71.8
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.3e-38 162.2 117 70.9
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 3.3e-38 162.2 156 60.3
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 4.3e-38 161.8 117 71.8
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 4.3e-38 161.8 137 65.0
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 5.7e-38 161.4 117 74.4
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 7.4e-38 161.0 122 71.3
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 9.7e-38 160.6 131 70.2
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 9.7e-38 160.6 120 74.2
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.8e-37 159.1 120 73.3
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 8.2e-37 157.5 113 75.2
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 2.4e-36 156.0 121 74.4
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 2.4e-36 156.0 138 64.5
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 3.4e-35 152.1 130 66.2
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 5.0e-34 148.3 121 67.8
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.1e-33 147.1 78 92.3
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 6.1e-32 141.4 129 62.0
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.4e-31 140.2 78 85.9
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 2.5e-30 136.0 93 74.2
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 2.8e-29 132.5 116 65.5
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 4.8e-29 131.7 102 70.6
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 1.1e-28 130.6 82 79.3
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 2.4e-28 129.4 75 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 5.5e-25 118.2 120 55.0
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 9.4e-25 117.5 104 61.5
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 6.7e-23 111.3 129 51.2
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 1.1e-22 110.5 88 62.5
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.5e-22 110.2 123 54.5
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 3.1e-20 102.4 75 62.7
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 3.5e-19 99.0 78 62.8
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 3.6e-16 89.0 103 47.6
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.3e-15 86.3 80 55.0
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 2.3e-07 59.7 36 83.3
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 3.0e-07 59.3 65 46.2


User provided reference genes

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