Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 3.9e-276 954.1 471 100.0
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 5.3e-265 917.1 472 96.2
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.8e-236 822.4 470 87.2
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.8e-234 815.1 470 86.8
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.1e-220 770.0 507 79.3
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 2.4e-209 732.3 423 82.5
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.2e-208 729.9 470 77.4
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 6.0e-208 727.6 461 78.1
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 7.8e-208 727.2 458 79.0
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 7.8e-208 727.2 422 82.7
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 3.0e-207 725.3 426 82.6
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 7.3e-206 720.7 443 79.9
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.2e-203 713.4 435 80.7
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.5e-203 713.0 440 78.6
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 9.9e-203 710.3 426 81.2
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.3e-202 709.9 454 75.8
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 1.9e-201 706.1 424 79.7
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 4.1e-201 704.9 423 79.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 9.2e-201 703.7 468 74.4
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.2e-200 703.4 422 80.1
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.5e-200 701.8 420 79.5
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 7.8e-200 700.7 423 78.7
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 2.3e-199 699.1 457 76.6
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 3.9e-199 698.4 443 76.5
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 3.9e-199 698.4 426 79.6
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.3e-198 695.3 422 79.1
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 5.6e-198 694.5 425 79.1
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.6e-197 693.0 434 77.9
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 2.1e-197 692.6 429 77.4
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 2.8e-197 692.2 461 74.4
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.8e-197 692.2 422 78.7
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 3.1e-196 688.7 463 72.8
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 3.1e-196 688.7 421 78.4
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 5.2e-196 688.0 439 75.6
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 5.2e-196 688.0 435 75.9
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 6.9e-196 687.6 448 75.0
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.9e-196 687.6 422 78.0
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.2e-195 686.8 440 75.2
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.2e-195 686.8 465 72.3
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 1.2e-195 686.8 421 78.1
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 4.4e-195 684.9 442 75.3
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 1.3e-194 683.3 425 76.7
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 2.2e-194 682.6 475 70.1
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.4e-193 679.9 452 74.1
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 3.2e-193 678.7 423 78.0
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 4.2e-193 678.3 469 71.2
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.2e-192 676.8 423 77.5
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 1.2e-192 676.8 418 77.5
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.5e-192 675.2 421 75.5
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 4.6e-192 674.9 420 76.0
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.7e-191 672.9 477 70.0
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.7e-191 672.9 420 76.0
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 3.9e-191 671.8 428 75.0
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 8.7e-191 670.6 419 76.4
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.9e-190 669.5 420 75.5
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 9.6e-190 667.2 445 72.6
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 9.6e-190 667.2 420 75.2
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 3.6e-189 665.2 420 75.0
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 6.9e-188 661.0 461 70.1
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 7.6e-187 657.5 422 75.1
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 1.7e-186 656.4 424 74.5
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.5e-184 648.7 453 70.0
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.1e-182 643.7 480 67.7
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.5e-179 633.3 420 73.3
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 3.4e-179 632.1 435 73.6
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.5e-179 631.7 382 78.8
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 5.8e-179 631.3 436 71.8
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 9.9e-179 630.6 378 79.6
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.1e-177 627.1 456 68.2
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 3.2e-177 625.5 475 66.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 9.3e-177 624.0 382 77.2
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 9.3e-177 624.0 381 78.2
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 1.2e-176 623.6 380 77.9
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.3e-173 613.6 426 73.9
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 2.8e-173 612.5 383 76.2
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 1.8e-172 609.8 379 75.5
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.7e-168 595.9 418 69.4
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 1.5e-166 590.1 342 82.5
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 4.8e-165 585.1 426 68.5
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 2.4e-164 582.8 386 72.5
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 1.3e-162 577.0 360 76.1
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.2e-161 572.4 424 68.2
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.3e-159 566.2 419 67.3
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.2e-155 553.9 398 67.6
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 2.0e-155 553.1 418 63.6
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.2e-153 545.8 350 75.1
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 4.2e-153 545.4 418 62.7
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 2.8e-149 532.7 424 63.7
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 4.2e-145 518.8 314 79.3
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 8.8e-143 511.1 326 74.5
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 2.4e-140 503.1 304 84.5
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 2.0e-134 483.4 449 56.8
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 4.7e-128 462.2 421 56.8
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.7e-117 427.2 459 48.6
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.1e-108 397.9 246 76.8
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 7.3e-105 385.2 202 91.1
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 1.9e-100 370.5 436 46.6
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 6.0e-91 339.0 292 60.6
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 2.3e-90 337.0 292 60.6
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 7.6e-86 322.0 274 57.7
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.4e-79 301.2 223 70.0
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 1.3e-74 284.6 211 67.8
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.7e-69 267.7 179 72.1
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 1.2e-62 245.0 306 49.0
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 2.2e-61 240.7 435 39.5
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 6.7e-58 229.2 164 67.1
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.5e-38 164.9 85 92.9
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 9.4e-36 155.6 93 79.6
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.9e-34 150.2 105 65.7
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 3.2e-28 130.6 91 71.4
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.2e-16 91.3 67 65.7
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 1.4e-10 72.0 43 79.1
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 7.0e-07 59.7 39 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 2.0e-06 58.2 240 23.3


User provided reference genes

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