Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 9.1e-47 189.9 96 100.0
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.2e-39 164.9 96 93.8
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 2.1e-27 125.6 97 73.2
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.3e-26 122.1 96 69.8
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.3e-24 116.3 96 65.6
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 1.1e-23 113.2 95 71.6
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 2.7e-22 108.6 96 64.6
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 7.8e-22 107.1 97 64.9
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 1.3e-21 106.3 95 64.2
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 2.3e-21 105.5 93 64.5
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 8.6e-21 103.6 97 67.0
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 1.5e-20 102.8 97 61.9
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 5.6e-20 100.9 97 62.9
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 9.5e-20 100.1 95 61.1
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.6e-19 99.4 96 60.4
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 2.1e-19 99.0 93 60.2
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 6.2e-19 97.4 93 59.1
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 6.2e-19 97.4 92 58.7
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.4e-18 96.3 96 60.4
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 1.8e-18 95.9 96 57.3
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 2.3e-18 95.5 93 59.1
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 3.1e-18 95.1 94 59.6
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.0e-18 94.7 96 56.2
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 4.0e-18 94.7 97 59.8
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 6.8e-18 94.0 92 57.6
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 8.9e-18 93.6 96 56.2
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 8.9e-18 93.6 96 56.2
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 3.4e-17 91.7 96 59.4
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 4.4e-17 91.3 89 56.2
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 7.6e-17 90.5 90 61.1
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 7.6e-17 90.5 94 58.5
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 7.6e-17 90.5 95 56.8
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 9.9e-17 90.1 89 55.1
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.3e-16 89.7 95 63.2
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 1.7e-16 89.4 95 54.7
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.9e-16 88.6 90 60.0
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 2.9e-16 88.6 95 56.8
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 2.9e-16 88.6 92 55.4
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 4.9e-16 87.8 93 55.9
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 1.1e-15 86.7 95 52.6
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.1e-15 86.7 90 58.9
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.4e-15 86.3 94 53.2
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 2.4e-15 85.5 95 55.8
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 3.2e-15 85.1 96 51.0
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 3.2e-15 85.1 94 57.4
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 4.1e-15 84.7 95 54.7
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 4.1e-15 84.7 93 53.8
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 4.1e-15 84.7 94 53.2
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 5.4e-15 84.3 93 54.8
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 5.4e-15 84.3 99 52.5
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 7.1e-15 84.0 92 55.4
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 1.2e-14 83.2 94 55.3
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.1e-14 82.4 89 52.8
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 6.0e-14 80.9 100 51.0
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 3.9e-13 78.2 92 51.1
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 5.1e-13 77.8 94 48.9
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 6.6e-13 77.4 87 56.3
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 1.1e-12 76.6 93 51.6
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 1.5e-12 76.3 92 51.1
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 1.5e-12 76.3 87 54.0
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.9e-12 75.9 86 54.7
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 1.9e-12 75.9 86 55.8
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.9e-12 75.9 92 47.8
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.3e-12 75.1 101 48.5
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 3.3e-12 75.1 87 54.0
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.6e-12 74.3 92 46.7
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.1e-11 72.4 92 46.7
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 2.8e-11 72.0 98 51.0
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 6.2e-11 70.9 94 48.9
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 1.1e-10 70.1 41 78.0
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 1.1e-10 70.1 86 46.5
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 1.4e-10 69.7 88 50.0
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 6.8e-10 67.4 94 50.0
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 8.9e-10 67.0 85 44.7
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.5e-09 66.2 55 61.8
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.5e-09 66.2 47 66.0
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 2.6e-09 65.5 92 42.4
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.6e-09 65.5 47 68.1
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 3.4e-09 65.1 96 45.8
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 3.4e-09 65.1 90 50.0
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.4e-09 64.7 37 75.7
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 5.8e-09 64.3 104 43.3
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 5.8e-09 64.3 90 45.6
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 7.6e-09 63.9 104 43.3
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 9.9e-09 63.5 43 67.4
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 1.3e-08 63.2 93 44.1
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 1.7e-08 62.8 91 41.8
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 8.4e-08 60.5 92 39.1
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 1.4e-07 59.7 96 39.6
Os11g0323860 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 1.9e-07 59.3 82 43.9
Os11g0412484 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 1.9e-07 59.3 82 43.9
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 3.2e-07 58.5 102 38.2
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 5.4e-07 57.8 93 41.9
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 7.1e-07 57.4 37 67.6
SGA_v2.0_scaffold58G20505 Striga asiatica HOM05D001345 ORTHO05D001190 7.1e-07 57.4 55 52.7
Ah.01g019150 Amaranthus hybridus HOM05D001345 ORTHO05D001190 9.3e-07 57.0 70 47.1
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 1.2e-06 56.6 91 39.6
Glyma.06G010000 Glycine max HOM05D006691 ORTHO05D007620 2.1e-06 55.8 81 42.0
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 3.5e-06 55.1 93 40.9
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 4.6e-06 54.7 93 37.6
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 4.6e-06 54.7 93 37.6
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 6.0e-06 54.3 93 38.7
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 7.8e-06 53.9 49 51.0


User provided reference genes

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