Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001407g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.0e-39 165.2 78 100.0
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.9e-28 127.1 63 90.5
Nitab4.5_0000640g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.7e-28 126.7 64 89.1
Nitab4.5_0000765g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 9.4e-26 119.8 61 88.5
Nitab4.5_0007657g0080 Nicotiana tabacum HOM05D000365 ORTHO05D001422 3.6e-25 117.9 63 87.3
Nitab4.5_0000488g0020 Nicotiana tabacum HOM05D031049 ORTHO05D001422 5.2e-24 114.0 60 88.3
Nitab4.5_0000858g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.3e-11 72.0 35 85.7
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-10 68.2 73 43.8
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 5.6e-10 67.4 73 43.8
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 7.3e-10 67.0 77 42.9
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 7.3e-10 67.0 77 42.9
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-09 66.2 73 42.5
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-09 66.2 73 42.5
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-09 66.2 73 42.5
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-09 65.1 73 42.5
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 2.8e-09 65.1 73 41.1
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 3.6e-09 64.7 77 41.6
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 3.6e-09 64.7 77 40.3
Nitab4.5_0004906g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.7e-09 64.3 34 79.4
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 4.7e-09 64.3 73 41.1
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 4.7e-09 64.3 77 41.6
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-09 64.3 73 41.1
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 4.7e-09 64.3 74 41.9
Sopen08g008690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-08 63.2 77 41.6
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 1.0e-08 63.2 74 41.9
Sopen12g010430 Solanum pennellii HOM05D000047 ORTHO05D000589 1.0e-08 63.2 74 41.9
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-08 62.8 73 41.1
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 1.8e-08 62.4 74 39.2
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 3.1e-08 61.6 73 41.1
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 3.1e-08 61.6 74 39.2
Nitab4.5_0007956g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.0e-08 61.2 70 40.0
Sopen07g017300 Solanum pennellii HOM05D008695 ORTHO05D001422 4.0e-08 61.2 73 39.7
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 4.0e-08 61.2 74 37.8
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 5.2e-08 60.8 74 39.2
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 1.2e-07 59.7 73 39.7
Nitab4.5_0000006g0700 Nicotiana tabacum HOM05D031049 ORTHO05D001422 1.5e-07 59.3 27 88.9
Sopen02g001990 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-07 58.9 66 42.4
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 2.0e-07 58.9 73 39.7
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 4.4e-07 57.8 74 40.5
Nitab4.5_0021888g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 4.4e-07 57.8 74 40.5
Sopen09g024660 Solanum pennellii HOM05D002047 ORTHO05D001422 4.4e-07 57.8 76 38.2
Nitab4.5_0003208g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.8e-07 57.4 63 41.3
Nitab4.5_0000235g0070 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.5e-07 57.0 74 40.5
Nitab4.5_0001544g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.3e-06 56.2 29 82.8
Nitab4.5_0003146g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-06 55.8 63 41.3
Nitab4.5_0002975g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-06 55.5 73 37.0
Sopen12g021880 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-06 55.5 61 42.6
Nitab4.5_0000665g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.4e-06 53.9 73 35.6
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.4e-06 53.9 74 39.2
Nitab4.5_0024891g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.4e-06 53.9 74 39.2
Sopen05g009810 Solanum pennellii HOM05D002047 ORTHO05D001422 6.4e-06 53.9 76 36.8
Nitab4.5_0005614g0060 Nicotiana tabacum HOM05D031049 ORTHO05D001422 8.3e-06 53.5 30 70.0


User provided reference genes

Program Settings