Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001405g0010 Nicotiana tabacum HOM05D004672 ORTHO05D005732 6.7e-96 354.0 175 100.0
Nitab4.5_0005163g0020 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.1e-63 246.9 218 63.8
Peaxi162Scf00016g03257 Petunia axillaris HOM05D004672 ORTHO05D005732 2.0e-63 246.1 214 62.6
Solyc01g106220.4 Solanum lycopersicum HOM05D004672 ORTHO05D005732 5.7e-63 244.6 217 63.1
Sopen01g048630 Solanum pennellii HOM05D004672 ORTHO05D005732 5.7e-63 244.6 217 63.1
Nitab4.5_0002335g0010 Nicotiana tabacum HOM05D004672 ORTHO05D005732 7.4e-63 244.2 218 64.2
PGSC0003DMG400010676 Solanum tuberosum HOM05D004672 ORTHO05D005732 1.3e-62 243.4 217 62.7
CAN.G504.43 Capsicum annuum HOM05D004672 ORTHO05D005732 6.3e-62 241.1 217 62.7
Nitab4.5_0005163g0030 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.2e-60 236.9 218 62.4
Lj9C342T12 Lonicera japonica HOM05D004672 ORTHO05D005732 8.5e-51 204.1 217 52.1
Dinv08968 Davidia involucrata HOM05D004672 ORTHO05D005732 2.5e-50 202.6 217 53.5
Dinv16031 Davidia involucrata HOM05D004672 ORTHO05D005732 3.2e-50 202.2 217 53.0
Actinidia02411 Actinidia chinensis HOM05D004672 ORTHO05D005732 9.4e-50 200.7 215 53.0
MSTRG.16633 Avicennia marina HOM05D004672 ORTHO05D005732 1.6e-49 199.9 217 53.0
CSS0000676 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 1.6e-49 199.9 217 51.6
Atru.chr6.1353 Acer truncatum HOM05D004672 ORTHO05D005732 6.1e-49 198.0 217 51.2
SGA_v2.0_scaffold83G26394 Striga asiatica HOM05D004672 ORTHO05D005732 6.1e-49 198.0 217 52.1
MD10G1056900 Malus domestica HOM05D004672 ORTHO05D005732 8.0e-49 197.6 217 51.6
Ciclev10027696m.g Citrus clementina HOM05D004672 ORTHO05D005732 1.0e-48 197.2 217 50.2
vmacro19391 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 1.8e-48 196.4 216 51.4
CSS0013617 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 2.3e-48 196.1 217 52.5
Cc02_g20590 Coffea canephora HOM05D004672 ORTHO05D005732 3.0e-48 195.7 217 50.2
FAN15G2368 Fragaria x ananassa HOM05D004672 ORTHO05D005732 3.0e-48 195.7 217 51.6
Prupe.8G075100 Prunus persica HOM05D004672 ORTHO05D005732 3.0e-48 195.7 217 53.0
MD05G1049800 Malus domestica HOM05D004672 ORTHO05D005732 5.2e-48 194.9 217 51.6
SalBow6G5524 Salvia bowleyana HOM05D004672 ORTHO05D005732 6.8e-48 194.5 217 53.0
FvH4_2g11160 Fragaria vesca HOM05D004672 ORTHO05D005732 8.8e-48 194.1 217 52.1
FAN24G1132 Fragaria x ananassa HOM05D004672 ORTHO05D005732 8.8e-48 194.1 217 52.1
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 1.5e-47 193.4 217 51.6
Duzib132G0551 Durio zibethinus HOM05D004672 ORTHO05D005732 1.5e-47 193.4 217 48.4
Hma1.2p1_0908F.1_g235670 Hydrangea macrophylla HOM05D004672 ORTHO05D005732 1.5e-47 193.4 217 51.2
Haze_10395 Corylus avellana HOM05D004672 ORTHO05D005732 2.0e-47 193.0 217 50.7
Manes.10G094200 Manihot esculenta HOM05D004672 ORTHO05D005732 2.0e-47 193.0 217 53.5
TWI59G0488 Tripterygium wilfordii HOM05D004672 ORTHO05D005732 2.6e-47 192.6 217 48.8
FAN20G2876 Fragaria x ananassa HOM05D004672 ORTHO05D005732 4.4e-47 191.8 217 51.6
FAN27G2619 Fragaria x ananassa HOM05D004672 ORTHO05D005732 4.4e-47 191.8 217 52.1
CiPaw.06G160900 Carya illinoinensis HOM05D004672 ORTHO05D005732 5.7e-47 191.4 217 50.7
Medtr2g010110 Medicago truncatula HOM05D004672 ORTHO05D005732 2.2e-46 189.5 218 51.4
RcHm_v2.0_Chr6g0269481 Rosa chinensis HOM05D004672 ORTHO05D005732 2.2e-46 189.5 217 50.7
Gohir.A13G049500 Gossypium hirsutum HOM05D004672 ORTHO05D005732 2.8e-46 189.1 217 47.9
Lj6g0005540 Lotus japonicus HOM05D004672 ORTHO05D005732 4.9e-46 188.3 216 50.9
Thecc.02G125000 Theobroma cacao HOM05D004672 ORTHO05D005732 4.9e-46 188.3 217 47.5
CANSAT54G0310 Cannabis sativa HOM05D004672 ORTHO05D005732 6.3e-46 188.0 217 51.2
Sc06g0005830 Simmondsia chinensis HOM05D004672 ORTHO05D005732 6.3e-46 188.0 216 48.1
Lalb_Chr18g0060301 Lupinus albus HOM05D004672 ORTHO05D005732 1.4e-45 186.8 215 51.6
Psat1g212840 Pisum sativum HOM05D004672 ORTHO05D005732 1.4e-45 186.8 217 50.2
DCAR_021895 Daucus carota HOM05D004672 ORTHO05D005732 2.4e-45 186.0 217 49.3
Glyma.15G060100 Glycine max HOM05D004672 ORTHO05D005732 2.4e-45 186.0 217 51.2
Gohir.D13G048000 Gossypium hirsutum HOM05D004672 ORTHO05D005732 2.4e-45 186.0 217 47.0
Gorai.013G053600 Gossypium raimondii HOM05D004672 ORTHO05D005732 2.4e-45 186.0 217 47.0
TAR628G0793 Trochodendron aralioides HOM05D004672 ORTHO05D005732 2.4e-45 186.0 217 47.5
Lsat_1_v5_gn_9_113661 Lactuca sativa HOM05D004672 ORTHO05D005732 3.1e-45 185.7 217 49.8
Lsat_1_v5_gn_9_113760 Lactuca sativa HOM05D004672 ORTHO05D005732 3.1e-45 185.7 217 49.8
Eucgr.I02582 Eucalyptus grandis HOM05D004672 ORTHO05D005732 4.1e-45 185.3 219 47.9
Glyma.13G254600 Glycine max HOM05D004672 ORTHO05D005732 4.1e-45 185.3 217 51.2
HanXRQChr03g0071051 Helianthus annuus HOM05D004672 ORTHO05D005732 4.1e-45 185.3 217 48.4
PSO017G1610 Papaver somniferum HOM05D004672 ORTHO05D005732 7.0e-45 184.5 217 47.0
PSO478G3191 Papaver somniferum HOM05D004672 ORTHO05D005732 7.0e-45 184.5 217 46.5
arahy.Tifrunner.gnm1.ann1.GE1IDC Arachis hypogaea HOM05D004672 ORTHO05D005732 1.6e-44 183.3 218 49.1
Phvul.006G199700 Phaseolus vulgaris HOM05D004672 ORTHO05D005732 2.7e-44 182.6 217 48.8
GSVIVG01038520001 Vitis vinifera HOM05D004672 ORTHO05D005732 2.7e-44 182.6 200 53.0
Oeu033795.2 Olea europaea HOM05D004672 ORTHO05D005732 3.5e-44 182.2 216 51.9
Potri.009G079900 Populus trichocarpa HOM05D004672 ORTHO05D005732 3.5e-44 182.2 217 48.4
Ca_00181_v3 Cicer arietinum L. HOM05D004672 ORTHO05D005732 4.5e-44 181.8 217 49.3
ECA240G2418 Erigeron canadensis HOM05D004672 ORTHO05D005732 4.5e-44 181.8 215 47.4
Sabra16G0178000 Salix brachista HOM05D004672 ORTHO05D005732 4.5e-44 181.8 217 48.4
THA.LOC104799703 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 4.5e-44 181.8 216 45.4
QL11p026607 Quercus lobata HOM05D004672 ORTHO05D005732 5.9e-44 181.4 217 49.3
arahy.Tifrunner.gnm1.ann1.BVLY6P Arachis hypogaea HOM05D004672 ORTHO05D005732 7.7e-44 181.0 218 48.6
Migut.B00522 Erythranthe guttata HOM05D004672 ORTHO05D005732 1.7e-43 179.9 216 47.7
Sed0001753 Sechium edule HOM05D004672 ORTHO05D005732 1.7e-43 179.9 216 48.6
Nn1g07286 Nelumbo nucifera HOM05D004672 ORTHO05D005732 2.3e-43 179.5 217 47.0
Oeu042393.4 Olea europaea HOM05D004672 ORTHO05D005732 2.3e-43 179.5 216 52.3
PGR142G1680 Punica granatum HOM05D004672 ORTHO05D005732 2.3e-43 179.5 216 47.2
Sabra09G0061900 Salix brachista HOM05D004672 ORTHO05D005732 2.3e-43 179.5 217 48.8
VMungo0540G1852 Vigna mungo HOM05D004672 ORTHO05D005732 2.3e-43 179.5 216 48.1
EL10Ac9g22127 Beta vulgaris HOM05D004672 ORTHO05D005732 3.8e-43 178.7 216 45.4
Aqoxy6G00637 Aquilegia oxysepala HOM05D004672 ORTHO05D005732 6.6e-43 177.9 217 46.5
Sed0014665 Sechium edule HOM05D004672 ORTHO05D005732 6.6e-43 177.9 216 47.7
Thhalv10003522m.g Eutrema salsugineum HOM05D004672 ORTHO05D005732 8.6e-43 177.6 215 45.1
THA.LOC104818461 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 1.1e-42 177.2 221 45.2
MBI16_g10454_MAGBIO Magnolia biondii HOM05D004672 ORTHO05D005732 2.5e-42 176.0 217 46.5
Potri.001G285600 Populus trichocarpa HOM05D004672 ORTHO05D005732 3.3e-42 175.6 217 48.4
Hund06479 Selenicereus undatus HOM05D004672 ORTHO05D005732 3.3e-42 175.6 216 45.4
CARHR278390 Cardamine hirsuta HOM05D004672 ORTHO05D005732 4.2e-42 175.3 216 44.9
AL8G41790 Arabidopsis lyrata HOM05D004672 ORTHO05D005732 1.2e-41 173.7 216 44.9
Aa31LG1G17480 Aethionema arabicum HOM05D004672 ORTHO05D005732 1.6e-41 173.3 216 44.9
Carub.0008s2522 Capsella rubella HOM05D004672 ORTHO05D005732 1.6e-41 173.3 216 44.0
Sp2g27510 Schrenkiella parvula HOM05D004672 ORTHO05D005732 8.0e-41 171.0 215 44.2
MELO3C018559.2 Cucumis melo HOM05D004672 ORTHO05D005732 1.4e-40 170.2 216 46.3
ClCG09G016480 Citrullus lanatus HOM05D004672 ORTHO05D005732 2.3e-40 169.5 216 46.3
A06p31080 Brassica napus HOM05D004672 ORTHO05D005732 3.0e-40 169.1 215 44.2
BraA06t26051Z Brassica rapa HOM05D004672 ORTHO05D005732 3.0e-40 169.1 215 44.2
AUR62030919 Chenopodium quinoa HOM05D004672 ORTHO05D005732 4.0e-40 168.7 216 43.5
Ah.01g024170 Amaranthus hybridus HOM05D004672 ORTHO05D005732 5.2e-40 168.3 216 44.9
AUR62027080 Chenopodium quinoa HOM05D004672 ORTHO05D005732 5.2e-40 168.3 216 43.1
C03p61860 Brassica napus HOM05D004672 ORTHO05D005732 6.8e-40 167.9 215 44.2
BolC3t18446H Brassica oleracea HOM05D004672 ORTHO05D005732 6.8e-40 167.9 215 44.2
CsaV3_7G007430 Cucumis sativus L. HOM05D004672 ORTHO05D005732 6.8e-40 167.9 216 45.4
Duzib132G1253 Durio zibethinus HOM05D004672 ORTHO05D005732 2.6e-39 166.0 218 45.4
AT5G64420 Arabidopsis thaliana HOM05D004672 ORTHO05D005732 9.8e-39 164.1 216 43.1
unitig_744.g24197 Utricularia gibba HOM05D004672 ORTHO05D005732 1.7e-38 163.3 217 44.2
TPR.G32637 Trifolium pratense HOM05D004672 ORTHO05D005732 1.8e-37 159.8 204 46.1
Peaxi162Scf00016g03462 Petunia axillaris HOM05D004672 ORTHO05D005732 1.3e-35 153.7 184 51.6
Actinidia00323 Actinidia chinensis HOM05D004672 ORTHO05D005732 5.0e-35 151.8 219 44.3
Zm00001eb231630 Zea mays HOM05D004672 ORTHO05D005732 1.5e-34 150.2 212 41.0
HPP92_024099 Vanilla planifolia HOM05D004672 ORTHO05D005732 1.6e-33 146.7 212 39.6
Os02g0135700 Oryza sativa ssp. japonica HOM05D004672 ORTHO05D005732 2.1e-33 146.4 212 40.6
SHI04921 Sapria himalayana HOM05D004672 ORTHO05D005732 8.0e-33 144.4 208 42.8
ATR0800G038 Amborella trichopoda HOM05D004672 ORTHO05D005732 3.1e-32 142.5 211 37.9
Gohir.D02G202550 Gossypium hirsutum HOM05D004672 ORTHO05D005732 1.7e-30 136.7 151 47.7
Nitab4.5_0003026g0050 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.7e-30 136.7 68 97.1
Gorai.005G227500 Gossypium raimondii HOM05D004672 ORTHO05D005732 2.2e-30 136.3 151 47.0
CDE05G2025 Ceratophyllum demersum HOM05D004672 ORTHO05D005732 2.9e-30 136.0 214 37.9
BcaC03g18261 Brassica carinata HOM05D004672 ORTHO05D005732 1.2e-25 120.6 176 40.3
SEGI_31749 Sequoiadendron giganteum HOM05D004672 ORTHO05D005732 2.1e-25 119.8 206 36.4
vmacro06228 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 3.4e-23 112.5 133 51.9
Pp3c3_9940 Physcomitrium patens HOM05D004672 ORTHO05D005732 2.5e-18 96.3 194 36.1
Pp3c13_11570 Physcomitrium patens HOM05D004672 ORTHO05D005732 9.5e-18 94.4 201 33.3
AL8G35270 Arabidopsis lyrata HOM05D004672 ORTHO05D005732 4.4e-15 85.5 68 60.3
SMO358G0564 Selaginella moellendorffii HOM05D004672 ORTHO05D005732 3.2e-13 79.3 206 30.6
Cpa.g.sc20.40 Carica papaya HOM05D004672 ORTHO05D005732 4.1e-13 79.0 98 44.9
AagrBONN_evm.TU.Sc2ySwM_228.3115__3116 Anthoceros agrestis HOM05D004672 ORTHO05D005732 5.4e-13 78.6 200 30.5
AagrBONN_evm.TU.Sc2ySwM_368.3324__3325 Anthoceros agrestis HOM05D004672 ORTHO05D005732 9.2e-13 77.8 196 31.1
Mapoly0136s0021 Marchantia polymorpha HOM05D004672 ORTHO05D005732 4.6e-12 75.5 199 30.2
BcaB07g29742 Brassica carinata HOM05D004672 ORTHO05D005732 1.1e-08 64.3 47 57.4
CBR_g52045 Chara braunii HOM05D004672 ORTHO05D005732 9.9e-07 57.8 141 29.1
RcHm_v2.0_Chr1g0357401 Rosa chinensis HOM05D004672 ORTHO05D346782 1.7e-06 57.0 117 37.6


User provided reference genes

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