Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 8.0e-255 883.2 445 100.0
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 4.8e-207 724.5 420 89.5
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 1.4e-193 679.9 418 84.2
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 2.3e-193 679.1 418 83.5
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 3.0e-193 678.7 418 83.7
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 1.7e-191 672.9 421 83.6
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 1.5e-184 649.8 419 81.1
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 7.7e-181 637.5 418 80.1
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 1.0e-161 573.9 415 72.0
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 5.2e-161 571.6 400 73.5
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 5.7e-160 568.2 404 72.5
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 7.5e-160 567.8 419 70.6
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 9.8e-160 567.4 415 71.1
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 2.8e-159 565.8 418 71.8
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 1.7e-156 556.6 418 69.1
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 2.9e-156 555.8 419 69.5
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 1.5e-155 553.5 418 70.1
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 1.6e-154 550.1 435 66.9
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 2.8e-154 549.3 433 66.5
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 1.4e-153 547.0 430 67.4
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 3.0e-153 545.8 367 73.8
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 5.2e-153 545.0 380 73.2
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 2.0e-152 543.1 421 68.2
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 1.3e-151 540.4 380 72.4
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 2.2e-151 539.7 396 70.5
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 6.3e-151 538.1 418 67.9
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 8.3e-151 537.7 390 70.0
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 1.4e-150 537.0 421 67.5
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 5.4e-150 535.0 398 70.6
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 7.0e-150 534.6 385 70.4
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.2e-149 533.9 406 68.5
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.0e-148 530.8 396 68.9
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 1.7e-148 530.0 356 75.6
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 6.6e-148 528.1 415 67.0
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 1.1e-147 527.3 406 68.0
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 1.1e-147 527.3 393 68.7
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 3.3e-147 525.8 366 73.2
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 4.3e-147 525.4 366 73.0
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 7.3e-147 524.6 402 66.7
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 1.2e-146 523.9 399 66.9
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 1.2e-146 523.9 366 73.0
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 1.6e-146 523.5 366 73.0
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 2.1e-146 523.1 366 72.7
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 2.1e-146 523.1 366 72.7
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 2.8e-146 522.7 399 67.4
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 2.8e-146 522.7 396 66.7
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 2.8e-146 522.7 366 72.4
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 3.6e-146 522.3 386 68.7
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 6.1e-146 521.5 365 71.0
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 6.1e-146 521.5 425 64.9
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 1.4e-145 520.4 420 65.0
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.4e-145 520.4 398 66.3
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 2.3e-145 519.6 398 66.3
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 3.1e-145 519.2 420 65.2
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 6.8e-145 518.1 360 70.6
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 8.9e-145 517.7 416 65.1
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 1.5e-144 516.9 416 66.1
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 2.0e-144 516.5 415 65.1
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 3.4e-144 515.8 387 68.2
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 3.4e-144 515.8 418 64.6
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 3.4e-144 515.8 360 70.6
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 4.4e-144 515.4 418 64.8
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 7.5e-144 514.6 419 65.2
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 7.5e-144 514.6 419 65.2
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 1.7e-143 513.5 359 71.3
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 4.9e-143 511.9 366 69.1
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 6.4e-143 511.5 419 64.7
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 8.3e-143 511.1 421 64.4
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 8.3e-143 511.1 371 69.5
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 1.1e-142 510.8 417 63.8
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 1.1e-142 510.8 421 64.1
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 1.1e-142 510.8 363 71.1
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 3.2e-142 509.2 424 62.7
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 3.2e-142 509.2 366 69.1
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 5.4e-142 508.4 358 69.6
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 5.4e-142 508.4 386 66.8
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 7.0e-142 508.1 358 69.8
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 9.2e-142 507.7 366 69.1
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 1.2e-141 507.3 366 68.6
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 1.2e-141 507.3 360 69.4
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 1.2e-141 507.3 391 66.5
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 3.5e-141 505.8 420 61.9
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 4.6e-141 505.4 365 69.6
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 1.3e-140 503.8 387 68.2
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 2.3e-140 503.1 394 65.0
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 3.0e-140 502.7 420 62.4
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 3.9e-140 502.3 419 63.0
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 3.9e-140 502.3 437 63.6
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 5.0e-140 501.9 379 67.0
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 6.6e-140 501.5 396 64.4
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 4.3e-139 498.8 358 69.8
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 5.6e-139 498.4 433 62.4
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 1.2e-138 497.3 365 67.9
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 2.8e-138 496.1 416 63.0
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 3.6e-138 495.7 445 59.8
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 3.6e-138 495.7 418 64.1
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 4.0e-137 492.3 417 59.7
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 5.2e-137 491.9 341 73.6
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 8.9e-137 491.1 365 69.9
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 2.2e-135 486.5 393 64.6
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 1.1e-134 484.2 384 63.5
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 1.9e-134 483.4 360 65.8
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 1.9e-134 483.4 383 64.0
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 4.6e-133 478.8 328 72.6
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 1.7e-132 476.9 393 61.8
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 1.2e-130 470.7 392 63.0
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 3.7e-127 459.1 328 71.6
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 8.3e-127 458.0 401 61.1
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 1.4e-126 457.2 457 56.2
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 4.6e-125 452.2 357 63.0
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.2e-122 444.1 366 64.8
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 1.4e-121 440.7 419 58.9
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 3.1e-121 439.5 366 64.2
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 1.9e-118 430.3 558 45.9
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 1.9e-118 430.3 386 56.2
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 4.6e-117 425.6 306 70.9
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 6.2e-114 415.2 317 67.2
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 3.8e-111 406.0 358 57.8
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.5e-96 357.5 374 55.6
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.5e-67 261.2 206 66.5
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 2.8e-66 256.9 147 81.0
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 1.4e-60 238.0 204 57.8
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 8.2e-58 228.8 385 39.7
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 3.1e-57 226.9 354 42.7
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 5.4e-49 199.5 129 75.2
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 1.1e-38 165.2 200 50.0
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 6.1e-37 159.5 96 80.2
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.7e-31 141.4 96 70.8
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 1.1e-30 138.7 81 76.5
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 6.2e-29 132.9 99 66.7
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 2.6e-27 127.5 388 28.4
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 3.9e-23 113.6 66 78.8
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 1.5e-11 75.1 53 67.9
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 1.9e-09 68.2 125 37.6
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 9.2e-09 65.9 41 70.7
Glyma.08G079050 Glycine max HOM05D005562 ORTHO05D213306 5.1e-07 60.1 76 38.2


User provided reference genes

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