Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 7.0e-295 1016.5 512 100.0
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 2.3e-269 931.8 496 91.5
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 1.3e-253 879.4 497 86.5
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 4.9e-248 860.9 497 84.9
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 1.4e-247 859.4 497 84.7
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 2.4e-242 842.0 497 82.9
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 4.8e-227 791.2 502 80.5
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 3.8e-176 622.1 463 66.1
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.1e-174 616.3 456 67.1
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 1.8e-173 613.2 481 62.2
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.3e-173 612.8 484 65.1
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 9.2e-170 600.9 506 61.7
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 1.6e-169 600.1 495 62.2
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 4.6e-169 598.6 490 63.5
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 7.8e-169 597.8 427 69.3
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 1.0e-168 597.4 426 68.5
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 1.0e-168 597.4 505 63.8
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 1.3e-168 597.0 487 62.4
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 2.3e-168 596.3 432 68.5
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 3.0e-168 595.9 443 66.6
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 5.0e-168 595.1 486 60.9
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 4.3e-167 592.0 427 68.9
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 9.5e-167 590.9 489 62.4
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 1.6e-166 590.1 490 62.0
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 4.7e-166 588.6 486 61.1
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 4.7e-166 588.6 436 66.3
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 4.7e-166 588.6 442 64.5
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 8.0e-166 587.8 498 59.8
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 8.0e-166 587.8 496 60.9
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.1e-165 585.9 493 59.8
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 5.2e-165 585.1 449 65.5
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 6.8e-165 584.7 506 62.8
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 3.4e-164 582.4 436 65.1
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 7.5e-164 581.3 491 63.5
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 7.5e-164 581.3 458 63.8
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 9.8e-164 580.9 490 61.0
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 1.7e-163 580.1 489 62.4
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 3.7e-163 578.9 514 58.2
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.4e-162 577.0 427 63.7
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 9.2e-162 574.3 475 60.8
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 6.0e-161 571.6 498 60.4
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 6.0e-161 571.6 442 62.9
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 1.0e-160 570.9 439 63.1
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.7e-160 570.1 498 58.6
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 1.7e-160 570.1 498 60.6
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 6.6e-160 568.2 429 65.0
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 6.6e-160 568.2 429 65.0
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 8.6e-160 567.8 496 59.5
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 1.1e-159 567.4 483 60.2
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 1.5e-159 567.0 438 64.6
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 1.9e-159 566.6 437 64.1
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 3.3e-159 565.8 432 63.2
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 5.6e-159 565.1 498 60.2
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 7.3e-159 564.7 498 60.2
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 1.2e-158 563.9 437 63.8
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 1.6e-158 563.5 428 64.3
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 2.1e-158 563.1 430 62.3
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 2.1e-158 563.1 503 57.5
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 2.8e-158 562.8 427 65.8
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 2.8e-158 562.8 422 62.6
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 2.8e-158 562.8 422 62.6
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 2.8e-158 562.8 437 63.6
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 6.2e-158 561.6 429 64.6
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 1.1e-157 560.8 428 64.5
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 1.4e-157 560.5 405 68.1
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 1.8e-157 560.1 429 64.1
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 1.8e-157 560.1 444 64.2
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 8.9e-157 557.8 425 62.4
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 8.9e-157 557.8 423 64.5
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 2.0e-156 556.6 459 59.9
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 4.4e-156 555.4 498 59.2
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 5.8e-156 555.1 453 60.5
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 2.2e-155 553.1 496 59.1
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 8.3e-155 551.2 427 64.6
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 8.3e-155 551.2 428 61.4
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 1.4e-154 550.4 430 60.7
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 1.2e-153 547.4 447 59.5
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 7.8e-153 544.7 492 55.9
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 5.1e-152 542.0 498 58.8
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 5.6e-151 538.5 425 61.2
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.8e-150 536.2 505 56.0
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 4.0e-149 532.3 422 61.1
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 5.2e-149 531.9 494 54.7
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 8.9e-149 531.2 450 60.4
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 1.2e-148 530.8 462 57.6
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 4.4e-148 528.9 494 56.1
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 9.9e-148 527.7 443 59.4
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 1.3e-147 527.3 401 66.3
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 3.2e-146 522.7 435 60.7
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 2.7e-145 519.6 435 60.2
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 2.3e-144 516.5 439 59.9
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 1.9e-143 513.5 447 57.7
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 2.4e-141 506.5 494 55.3
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 4.0e-141 505.8 410 61.2
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 2.9e-139 499.6 400 60.5
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 4.9e-139 498.8 513 49.5
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 4.2e-138 495.7 435 55.4
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 5.4e-138 495.4 400 59.5
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 3.5e-137 492.7 493 52.7
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.8e-134 482.3 360 66.4
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 1.2e-132 477.6 453 55.6
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 4.5e-132 475.7 454 55.7
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 5.8e-132 475.3 345 66.1
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 4.0e-125 452.6 343 65.0
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 2.6e-124 449.9 348 64.4
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 9.9e-124 448.0 346 63.3
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 4.9e-123 445.7 356 63.2
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 7.9e-113 411.8 284 69.4
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 1.1e-90 338.2 438 43.6
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 5.2e-88 329.3 247 65.6
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 5.2e-88 329.3 425 41.9
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 3.1e-77 293.5 402 44.8
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.0e-72 278.5 230 61.3
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 3.4e-71 273.5 214 65.4
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 2.8e-70 270.4 415 38.6
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 3.7e-70 270.0 200 68.0
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 5.0e-67 259.6 202 63.9
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 7.2e-66 255.8 464 35.1
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 4.9e-54 216.5 328 40.9
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 7.0e-53 212.6 184 57.1
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.1e-50 205.3 167 59.9
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 5.2e-48 196.4 452 29.9
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.5e-39 168.3 237 40.1
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 2.6e-39 167.5 195 50.8
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 5.6e-34 149.8 105 63.8
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 3.6e-33 147.1 292 37.7
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.2e-32 143.3 110 62.7
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.2e-30 137.9 112 59.8
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 3.2e-29 134.0 333 29.7
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.2e-29 134.0 114 57.9
Oeu057691.1 Olea europaea HOM05D005741 ORTHO05D007240 9.9e-23 112.5 76 71.1
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.2e-20 105.5 77 63.6
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.5e-18 98.6 111 45.0
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 2.6e-15 87.8 82 56.1
AL7G37230 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 5.1e-11 73.6 73 53.4


User provided reference genes

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