Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001377g0010 Nicotiana tabacum HOM05D001197 ORTHO05D000124 3.9e-111 404.8 209 100.0
Nitab4.5_0000011g0090 Nicotiana tabacum HOM05D001197 ORTHO05D000124 2.5e-33 146.4 219 46.6
Peaxi162Scf00358g00512 Petunia axillaris HOM05D001197 ORTHO05D000124 1.0e-26 124.4 206 45.1
Sopen09g005950 Solanum pennellii HOM05D001197 ORTHO05D000124 4.3e-25 119.0 201 44.8
PGSC0003DMG400008817 Solanum tuberosum HOM05D001197 ORTHO05D000124 1.2e-22 110.9 202 42.1
HanXRQChr14g0433281 Helianthus annuus HOM05D001197 ORTHO05D000124 2.9e-21 106.3 210 38.6
Cc04_g08840 Coffea canephora HOM05D001197 ORTHO05D000124 3.8e-21 105.9 163 41.1
Solyc09g011210.4 Solanum lycopersicum HOM05D001197 ORTHO05D000124 3.8e-21 105.9 174 42.5
MSTRG.4327 Avicennia marina HOM05D001197 ORTHO05D000124 8.4e-21 104.8 163 42.3
MBI08_g09791_MAGBIO Magnolia biondii HOM05D001197 ORTHO05D000124 2.1e-19 100.1 158 42.4
Lsat_1_v5_gn_2_11821 Lactuca sativa HOM05D001197 ORTHO05D000124 4.6e-19 99.0 191 38.2
SalBow8G2066 Salvia bowleyana HOM05D001197 ORTHO05D000124 4.6e-19 99.0 165 42.4
FAN08G2917 Fragaria x ananassa HOM05D001197 ORTHO05D000124 2.3e-18 96.7 157 41.4
Dinv08286 Davidia involucrata HOM05D001197 ORTHO05D000124 5.1e-18 95.5 214 35.5
Sed0025992 Sechium edule HOM05D001197 ORTHO05D000124 5.1e-18 95.5 174 39.1
MELO3C001961.2 Cucumis melo HOM05D001197 ORTHO05D000124 6.7e-18 95.1 174 37.9
TAR628G1289 Trochodendron aralioides HOM05D001197 ORTHO05D000124 1.9e-17 93.6 224 37.5
TAR629G2713 Trochodendron aralioides HOM05D001197 ORTHO05D000124 1.9e-17 93.6 224 37.5
ClCG04G012480 Citrullus lanatus HOM05D001197 ORTHO05D000124 2.5e-17 93.2 174 38.5
FAN04G2377 Fragaria x ananassa HOM05D001197 ORTHO05D000124 3.3e-17 92.8 157 39.5
Medtr6g477870 Medicago truncatula HOM05D001197 ORTHO05D000124 5.7e-17 92.0 221 34.8
Atru.chr9.1575 Acer truncatum HOM05D001197 ORTHO05D000124 7.4e-17 91.7 216 34.7
CSS0018921 Camellia sinensis var. sinensis HOM05D001197 ORTHO05D000124 1.3e-16 90.9 186 38.7
CsaV3_1G005220 Cucumis sativus L. HOM05D001197 ORTHO05D000124 1.3e-16 90.9 178 37.1
Lj2g0011934 Lotus japonicus HOM05D001197 ORTHO05D000124 1.3e-16 90.9 184 38.6
RcHm_v2.0_Chr7g0177501 Rosa chinensis HOM05D001197 ORTHO05D000124 1.3e-16 90.9 157 38.9
FvH4_5g18110 Fragaria vesca HOM05D001197 ORTHO05D000124 1.6e-16 90.5 157 38.9
FAN18G0184 Fragaria x ananassa HOM05D001197 ORTHO05D000124 1.6e-16 90.5 157 38.9
Lalb_Chr22g0353761 Lupinus albus HOM05D001197 ORTHO05D000124 1.6e-16 90.5 201 35.3
Potri.012G038200 Populus trichocarpa HOM05D001197 ORTHO05D000124 1.6e-16 90.5 200 34.5
Glyma.16G217600 Glycine max HOM05D001197 ORTHO05D000124 2.1e-16 90.1 181 37.6
Hma1.2p1_0493F.1_g165030 Hydrangea macrophylla HOM05D001197 ORTHO05D000124 2.8e-16 89.7 143 40.6
Manes.02G224200 Manihot esculenta HOM05D001197 ORTHO05D000124 2.8e-16 89.7 160 37.5
Prupe.5G241100 Prunus persica HOM05D001197 ORTHO05D000124 2.8e-16 89.7 191 37.2
CDE05G1032 Ceratophyllum demersum HOM05D001197 ORTHO05D000124 3.7e-16 89.4 176 38.1
Ciclev10022555m.g Citrus clementina HOM05D001197 ORTHO05D000124 3.7e-16 89.4 160 38.1
MD06G1236600 Malus domestica HOM05D001197 ORTHO05D000124 6.2e-16 88.6 183 37.7
Nn2g12601 Nelumbo nucifera HOM05D001197 ORTHO05D000124 1.1e-15 87.8 216 35.2
GSVIVG01029394001 Vitis vinifera HOM05D001197 ORTHO05D000124 1.1e-15 87.8 213 35.2
VMungo0464G1095 Vigna mungo HOM05D001197 ORTHO05D000124 1.8e-15 87.0 220 34.5
CiPaw.15G151100 Carya illinoinensis HOM05D001197 ORTHO05D000124 2.4e-15 86.7 142 40.1
Migut.D02054 Erythranthe guttata HOM05D001197 ORTHO05D000124 2.4e-15 86.7 146 41.1
THA.LOC104798716 Tarenaya hassleriana HOM05D001197 ORTHO05D000124 2.4e-15 86.7 169 36.1
Phvul.004G143300 Phaseolus vulgaris HOM05D001197 ORTHO05D000124 3.1e-15 86.3 154 39.6
arahy.Tifrunner.gnm1.ann1.K1P89V Arachis hypogaea HOM05D001197 ORTHO05D000124 5.3e-15 85.5 141 40.4
arahy.Tifrunner.gnm1.ann1.QW9ZFX Arachis hypogaea HOM05D001197 ORTHO05D000124 5.3e-15 85.5 141 40.4
Psat1g031480 Pisum sativum HOM05D001197 ORTHO05D000124 5.3e-15 85.5 185 37.8
PSO063G5578 Papaver somniferum HOM05D001197 ORTHO05D000124 6.9e-15 85.1 214 34.1
Thhalv10019191m.g Eutrema salsugineum HOM05D001197 ORTHO05D000124 9.0e-15 84.7 190 35.3
Haze_18990 Corylus avellana HOM05D001197 ORTHO05D000124 1.2e-14 84.3 159 37.7
BraA07t30615Z Brassica rapa HOM05D001858 ORTHO05D000124 1.5e-14 84.0 154 36.4
Eucgr.H00611 Eucalyptus grandis HOM05D001197 ORTHO05D000124 2.0e-14 83.6 140 40.0
EL10Ac6g13232 Beta vulgaris HOM05D001197 ORTHO05D000124 2.6e-14 83.2 159 36.5
BcaC08g45639 Brassica carinata HOM05D001197 ORTHO05D000124 3.4e-14 82.8 154 36.4
A07p29770 Brassica napus HOM05D001858 ORTHO05D001838 3.4e-14 82.8 154 36.4
Cpa.g.sc21.60 Carica papaya HOM05D001197 ORTHO05D000124 3.4e-14 82.8 162 37.0
CANSAT01G2455 Cannabis sativa HOM05D001197 ORTHO05D000124 4.5e-14 82.4 140 40.0
TPR.G24059 Trifolium pratense HOM05D001197 ORTHO05D000124 4.5e-14 82.4 142 38.0
Sp5g28690 Schrenkiella parvula HOM05D001197 ORTHO05D000124 5.8e-14 82.0 152 37.5
SGA_v2.0_scaffold164G38122 Striga asiatica HOM05D001197 ORTHO05D000124 5.8e-14 82.0 159 37.7
HPP92_002398 Vanilla planifolia HOM05D001197 ORTHO05D000124 5.8e-14 82.0 158 38.6
C06p33980 Brassica napus HOM05D001858 ORTHO05D001838 7.6e-14 81.6 154 35.7
BolC6t38513H Brassica oleracea HOM05D001197 ORTHO05D000124 7.6e-14 81.6 154 35.7
Aa31LG4G3740 Aethionema arabicum HOM05D001197 ORTHO05D000124 1.0e-13 81.3 161 36.6
CARHR066530 Cardamine hirsuta HOM05D001197 ORTHO05D000124 1.3e-13 80.9 162 37.0
TWI15G0442 Tripterygium wilfordii HOM05D001197 ORTHO05D000124 1.3e-13 80.9 139 40.3
Ah.03g134890 Amaranthus hybridus HOM05D005468 ORTHO05D006789 1.7e-13 80.5 159 37.7
BcaB03g15716 Brassica carinata HOM05D001197 ORTHO05D000124 3.8e-13 79.3 154 35.7
AL2G33280 Arabidopsis lyrata HOM05D001197 ORTHO05D000124 1.1e-12 77.8 162 35.2
ATR0807G033 Amborella trichopoda HOM05D001197 ORTHO05D000124 1.4e-12 77.4 158 36.1
Carub.0002s1022 Capsella rubella HOM05D001197 ORTHO05D000124 2.5e-12 76.6 141 36.9
Carub.0002s2027 Capsella rubella HOM05D001197 ORTHO05D000124 2.5e-12 76.6 141 36.9
Carub.0006s2750 Capsella rubella HOM05D001197 ORTHO05D000124 2.5e-12 76.6 141 36.9
Aqoxy3G04122 Aquilegia oxysepala HOM05D001197 ORTHO05D000124 7.1e-12 75.1 136 38.2
PGR083G2829 Punica granatum HOM05D001197 ORTHO05D000124 7.1e-12 75.1 134 38.1
Carub.0002s1020 Capsella rubella HOM05D001197 ORTHO05D000124 9.3e-12 74.7 141 36.2
Carub.0002s1021 Capsella rubella HOM05D001197 ORTHO05D000124 1.2e-11 74.3 141 36.2
Hund05872 Selenicereus undatus HOM05D001197 ORTHO05D000124 1.2e-11 74.3 175 33.1
AT1G73530 Arabidopsis thaliana HOM05D001197 ORTHO05D000124 2.7e-11 73.2 141 34.0
PSO782G3055 Papaver somniferum HOM05D001197 ORTHO05D000124 4.6e-11 72.4 132 37.9
Cfa020683 Carpinus fangiana HOM05D001197 ORTHO05D000124 7.9e-11 71.6 134 36.6
Actinidia18876 Actinidia chinensis HOM05D001197 ORTHO05D000124 1.3e-10 70.9 36 94.4
BolC2t09159H Brassica oleracea HOM05D001197 ORTHO05D000124 1.3e-10 70.9 37 89.2
AUR62032806 Chenopodium quinoa HOM05D001197 ORTHO05D000124 1.3e-10 70.9 133 37.6
C02p31160 Brassica napus HOM05D001197 ORTHO05D000124 5.1e-10 68.9 37 86.5
Sabra12G0026500 Salix brachista HOM05D001197 ORTHO05D000124 1.9e-09 67.0 132 34.8
C08p43310 Brassica napus HOM05D054214 ORTHO05D000124 4.3e-09 65.9 72 51.4
unitig_744.g24187 Utricularia gibba HOM05D001197 ORTHO05D000124 2.8e-08 63.2 176 30.7
Zm00001eb428060 Zea mays HOM05D001197 ORTHO05D000124 1.8e-07 60.5 202 26.7
FAN13G2954 Fragaria x ananassa HOM05D001197 ORTHO05D000124 2.6e-06 56.6 152 31.6


User provided reference genes

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