Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001376g0050 Nicotiana tabacum HOM05D000042 ORTHO05D000028 2.1e-49 198.7 104 100.0
Nitab4.5_0003356g0020 Nicotiana tabacum HOM05D000042 ORTHO05D000028 3.0e-27 125.2 79 88.6
Peaxi162Scf00008g01620 Petunia axillaris HOM05D000042 ORTHO05D000028 5.3e-24 114.4 159 50.9
Peaxi162Scf00021g00117 Petunia axillaris HOM05D000042 ORTHO05D000028 3.4e-15 85.1 78 61.5
Nitab4.5_0001127g0100 Nicotiana tabacum HOM05D000113 ORTHO05D000028 7.7e-15 84.0 78 61.5
Solyc01g093965.2 Solanum lycopersicum HOM05D000042 ORTHO05D000028 6.5e-14 80.9 73 60.3
Sopen01g037760 Solanum pennellii HOM05D000042 ORTHO05D000028 8.5e-14 80.5 73 60.3
PGSC0003DMG400000009 Solanum tuberosum HOM05D000042 ORTHO05D000028 5.5e-13 77.8 73 58.9
Peaxi162Scf00021g00016 Petunia axillaris HOM05D000042 ORTHO05D000028 2.7e-12 75.5 158 38.6
PGSC0003DMG400010263 Solanum tuberosum HOM05D000042 ORTHO05D000028 4.6e-12 74.7 75 68.0
CAN.G1561.3 Capsicum annuum HOM05D000042 ORTHO05D000028 1.0e-11 73.6 76 56.6
Nitab4.5_0004622g0020 Nicotiana tabacum HOM05D000113 ORTHO05D002571 1.1e-10 70.1 77 54.5
vmacro13354 Vaccinium macrocarpon HOM05D000042 ORTHO05D000028 2.5e-10 68.9 73 60.3
Sopen10g006560 Solanum pennellii HOM05D000042 ORTHO05D000028 5.7e-10 67.8 68 66.2
Rhsim07G0023100 Rhododendron simsii HOM05D000042 ORTHO05D000028 1.7e-09 66.2 71 53.5
Solyc10g017630.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 8.2e-09 63.9 67 62.7
MSTRG.17222 Avicennia marina HOM05D000042 ORTHO05D000028 4.1e-08 61.6 78 50.0
Nitab4.5_0003182g0070 Nicotiana tabacum HOM05D000042 ORTHO05D000028 5.3e-08 61.2 79 53.2
CAN.G170.68 Capsicum annuum HOM05D000042 ORTHO05D000028 9.1e-08 60.5 82 54.9
MSTRG.20780 Avicennia marina HOM05D000042 ORTHO05D000028 1.2e-07 60.1 78 50.0
Nitab4.5_0001127g0080 Nicotiana tabacum HOM05D000042 ORTHO05D000028 2.0e-07 59.3 107 43.9
Gohir.D11G087800 Gossypium hirsutum HOM05D000042 ORTHO05D000028 2.6e-07 58.9 73 47.9
DCAR_006890 Daucus carota HOM05D000042 ORTHO05D000028 3.4e-07 58.5 87 48.3
Migut.B01668 Erythranthe guttata HOM05D000042 ORTHO05D000028 7.7e-07 57.4 157 31.2
Medtr8g033220 Medicago truncatula HOM05D000042 ORTHO05D000028 7.7e-07 57.4 75 49.3
Psat4g197920 Pisum sativum HOM05D000042 ORTHO05D000028 7.7e-07 57.4 98 43.9
Actinidia09577 Actinidia chinensis HOM05D000042 ORTHO05D000028 1.0e-06 57.0 77 49.4
CSS0004072 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 2.2e-06 55.8 74 54.1
Potri.002G151700 Populus trichocarpa HOM05D000042 ORTHO05D000028 3.8e-06 55.1 74 50.0
Duzib138G1838 Durio zibethinus HOM05D000042 ORTHO05D000028 5.0e-06 54.7 95 44.2
Hma1.2p1_0033F.1_g020760 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 5.0e-06 54.7 86 45.3
Gohir.A11G083700 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.5e-06 54.3 95 40.0
HanXRQChr04g0122131 Helianthus annuus HOM05D000042 ORTHO05D000028 6.5e-06 54.3 74 51.4
Psat4g198000 Pisum sativum HOM05D000042 ORTHO05D000028 6.5e-06 54.3 92 42.4
SalBow7G1396 Salvia bowleyana HOM05D000042 ORTHO05D000028 6.5e-06 54.3 161 32.9
PGSC0003DMG400000008 Solanum tuberosum HOM05D000042 ORTHO05D000028 6.5e-06 54.3 76 47.4


User provided reference genes

Program Settings