Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.3e-116 424.5 585 100.0
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-60 238.8 587 76.7
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-52 209.9 124 88.7
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.4e-51 206.8 124 87.9
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.6e-48 198.4 124 83.9
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.6e-48 196.8 124 83.1
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 5.2e-28 130.2 125 60.8
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.4e-25 122.1 123 58.5
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.9e-25 121.7 123 60.2
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 7.8e-24 116.3 123 55.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 1.7e-23 115.2 116 58.6
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 2.3e-23 114.8 125 61.6
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 5.1e-23 113.6 121 57.0
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.1e-22 112.5 124 54.0
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 1.5e-22 112.1 124 54.0
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.2e-19 102.4 126 51.6
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.2e-18 98.2 115 53.0
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.8e-18 97.4 115 53.0
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.8e-18 97.4 115 53.0
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 4.2e-17 94.0 73 69.9
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-14 85.9 72 65.3
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.9e-14 85.1 124 46.0
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.3e-14 84.0 119 46.2
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 3.6e-13 80.9 113 46.9
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.4e-12 78.2 131 46.6
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.4e-12 78.2 101 50.5
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 5.3e-12 77.0 126 44.4
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.5e-11 75.5 88 53.4
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.5e-11 75.5 88 53.4
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 2.0e-11 75.1 89 50.6
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.0e-11 75.1 126 47.6
Nitab4.5_0000144g0130 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-11 75.1 67 59.7
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 2.6e-11 74.7 123 43.9
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 4.5e-11 73.9 117 46.2
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 5.8e-11 73.6 89 51.7
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 5.8e-11 73.6 94 47.9
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.3e-10 72.4 85 43.5
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 1.3e-10 72.4 132 42.4
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 4.9e-10 70.5 100 50.0
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 4.9e-10 70.5 126 42.9
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 6.4e-10 70.1 88 51.1
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 6.4e-10 70.1 134 40.3
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 8.4e-10 69.7 112 42.0
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.1e-09 69.3 139 37.4
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.9e-09 68.6 89 49.4
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.9e-09 68.6 100 50.0
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 1.9e-09 68.6 95 49.5
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 3.2e-09 67.8 119 41.2
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.2e-09 67.8 119 42.0
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.2e-09 67.4 120 42.5
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.2e-09 67.4 120 42.5
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 9.3e-09 66.2 124 41.1
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.2e-08 65.9 129 41.9
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.2e-08 65.9 87 49.4
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.6e-08 65.5 105 41.9
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 2.1e-08 65.1 84 48.8
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.7e-08 64.7 151 37.1
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.7e-08 64.7 119 40.3
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 2.7e-08 64.7 108 43.5
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 3.5e-08 64.3 115 42.6
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 3.5e-08 64.3 119 44.5
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 4.6e-08 63.9 119 41.2
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 4.6e-08 63.9 121 42.1
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 7.9e-08 63.2 128 40.6
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 7.9e-08 63.2 98 43.9
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.0e-07 62.8 128 38.3
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.3e-07 62.4 103 42.7
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.3e-07 62.4 105 45.7
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.8e-07 62.0 98 48.0
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.8e-07 62.0 108 44.4
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 1.8e-07 62.0 93 44.1
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.8e-07 62.0 118 42.4
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.8e-07 62.0 91 42.9
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 3.0e-07 61.2 98 45.9
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 3.0e-07 61.2 145 36.6
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 3.9e-07 60.8 136 37.5
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 8.7e-07 59.7 73 50.7
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 8.7e-07 59.7 90 45.6
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 1.5e-06 58.9 91 45.1
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 1.9e-06 58.5 94 39.4
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.9e-06 58.5 87 47.1
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.9e-06 58.5 87 47.1
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 2.5e-06 58.2 121 40.5
CSS0024231 Camellia sinensis var. sinensis HOM05D007160 ORTHO05D005331 3.3e-06 57.8 94 47.9
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 3.3e-06 57.8 106 41.5
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.3e-06 57.4 116 38.8
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.3e-06 57.4 126 41.3
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 5.6e-06 57.0 92 46.7
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.6e-06 57.0 104 40.4
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 7.4e-06 56.6 90 38.9
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 9.6e-06 56.2 118 38.1


User provided reference genes

Program Settings