Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.2e-86 322.4 479 100.0
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-56 224.6 125 90.4
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.4e-53 213.4 124 87.1
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-52 212.2 125 87.2
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-51 208.0 125 85.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-48 198.0 124 83.1
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 3.9e-27 127.5 122 58.2
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-24 119.4 121 59.5
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-24 119.4 121 60.3
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.5e-23 115.5 126 53.2
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.0e-23 115.2 126 53.2
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 5.8e-23 113.6 125 52.8
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 7.6e-23 113.2 123 57.7
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 8.4e-22 109.8 117 55.6
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 8.4e-22 109.8 127 53.5
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 1.2e-20 105.9 123 57.7
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.7e-19 99.8 121 52.1
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.5e-18 99.0 121 52.1
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.5e-18 99.0 121 52.1
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 4.0e-16 90.9 123 48.8
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 4.0e-16 90.9 96 61.5
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 6.9e-16 90.1 125 44.8
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-15 89.0 74 67.6
Nitab4.5_0000144g0130 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.3e-14 85.9 65 66.2
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.8e-14 84.3 74 62.2
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 2.4e-13 81.6 118 48.3
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 6.0e-12 77.0 93 49.5
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 6.0e-12 77.0 85 47.1
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 1.8e-11 75.5 120 43.3
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.8e-11 75.5 123 46.3
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 3.0e-11 74.7 113 43.4
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 3.0e-11 74.7 83 50.6
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 5.1e-11 73.9 81 50.6
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 5.1e-11 73.9 81 50.6
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 6.7e-11 73.6 128 43.8
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 6.7e-11 73.6 91 48.4
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 8.7e-11 73.2 124 41.1
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 1.5e-10 72.4 129 41.1
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 1.5e-10 72.4 116 42.2
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.9e-10 72.0 89 47.2
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 1.9e-10 72.0 78 52.6
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.9e-10 72.0 117 41.0
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.9e-10 72.0 112 45.5
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 2.5e-10 71.6 122 43.4
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 5.6e-10 70.5 73 56.2
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 7.4e-10 70.1 134 38.8
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 9.6e-10 69.7 125 41.6
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 1.6e-09 68.9 103 43.7
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.1e-09 68.6 123 42.3
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 2.8e-09 68.2 101 45.5
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 3.7e-09 67.8 95 47.4
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 3.7e-09 67.8 107 41.1
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.8e-09 67.4 115 43.5
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 6.2e-09 67.0 130 40.8
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 6.2e-09 67.0 113 40.7
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 6.2e-09 67.0 108 42.6
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 8.2e-09 66.6 107 46.7
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.4e-08 65.9 89 49.4
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.8e-08 65.5 115 40.9
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.8e-08 65.5 143 39.9
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 1.8e-08 65.5 111 44.1
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 2.4e-08 65.1 95 44.2
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 4.0e-08 64.3 97 40.2
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 4.0e-08 64.3 100 45.0
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 5.3e-08 63.9 115 43.5
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.9e-08 63.5 108 43.5
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.2e-07 62.8 89 44.9
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.5e-07 62.4 97 43.3
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 2.0e-07 62.0 85 40.0
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 2.0e-07 62.0 81 44.4
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.0e-07 62.0 81 44.4
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 2.6e-07 61.6 88 43.2
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 2.6e-07 61.6 100 45.0
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.4e-07 61.2 118 41.5
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.4e-07 61.2 118 41.5
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.5e-07 60.8 87 46.0
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 7.6e-07 60.1 96 43.8
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 7.6e-07 60.1 115 42.6
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.0e-06 59.7 110 38.2
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 1.0e-06 59.7 97 43.3
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 1.0e-06 59.7 120 41.7
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 1.3e-06 59.3 60 50.0
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 1.3e-06 59.3 123 38.2
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.3e-06 59.3 121 38.8
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.3e-06 59.3 135 34.1
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 2.2e-06 58.5 82 42.7
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 3.8e-06 57.8 130 39.2
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 3.8e-06 57.8 92 41.3
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.8e-06 57.8 106 42.5
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 3.8e-06 57.8 126 37.3
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.9e-06 57.4 93 39.8
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 4.9e-06 57.4 121 42.1
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 6.5e-06 57.0 84 41.7
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 6.5e-06 57.0 129 35.7
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 6.5e-06 57.0 115 35.7


User provided reference genes

Program Settings