Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001374g0010 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.7e-186 653.7 332 100.0
Nitab4.5_0000688g0230 Nicotiana tabacum HOM05D007644 ORTHO05D283105 3.5e-69 266.2 610 35.2
Nitab4.5_0000032g0290 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.1e-66 255.4 335 51.0
Nitab4.5_0013890g0010 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.3e-63 245.4 335 48.4
Nitab4.5_0008374g0030 Nicotiana tabacum HOM05D007644 ORTHO05D285383 1.2e-53 214.5 235 59.1
Nitab4.5_0000091g0130 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.0e-53 212.2 346 44.2
Nitab4.5_0000032g0340 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.6e-52 208.8 348 44.5
Nitab4.5_0007855g0020 Nicotiana tabacum HOM05D007644 ORTHO05D285986 2.9e-47 193.4 312 42.9
Nitab4.5_0001374g0020 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.9e-46 190.7 218 55.0
Nitab4.5_0002943g0090 Nicotiana tabacum HOM05D007644 ORTHO05D284849 1.3e-44 184.5 216 53.7
Nitab4.5_0001374g0110 Nicotiana tabacum HOM05D007644 ORTHO05D285840 5.0e-44 182.6 203 55.2
Nitab4.5_0008374g0050 Nicotiana tabacum HOM05D007644 ORTHO05D283714 6.2e-42 175.6 171 61.4
Nitab4.5_0000091g0140 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.4e-40 169.9 307 42.0
Nitab4.5_0001374g0120 Nicotiana tabacum HOM05D007644 ORTHO05D285903 1.6e-37 161.0 193 53.9
Nitab4.5_0001374g0130 Nicotiana tabacum HOM05D007644 ORTHO05D285991 1.6e-37 161.0 180 53.3
Nitab4.5_0000091g0220 Nicotiana tabacum HOM05D007644 ORTHO05D283227 1.3e-36 157.9 233 50.2
Nitab4.5_0000091g0110 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.5e-35 154.5 256 43.0
Nitab4.5_0000091g0050 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.6e-34 149.8 293 40.3
Solyc04g051160.1 Solanum lycopersicum HOM05D000164 ORTHO05D010915 6.8e-33 145.6 336 31.5
Nitab4.5_0000091g0060 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.0e-32 144.1 298 39.6
Nitab4.5_0002943g0100 Nicotiana tabacum HOM05D007644 ORTHO05D286234 3.4e-32 143.3 151 58.3
Nitab4.5_0000091g0210 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.6e-32 142.1 255 43.1
Nitab4.5_0000091g0030 Nicotiana tabacum HOM05D007644 ORTHO05D285044 1.4e-30 137.9 285 41.1
Nitab4.5_0001374g0030 Nicotiana tabacum HOM05D007644 ORTHO05D283927 1.4e-30 137.9 213 46.0
Nitab4.5_0000688g0260 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.2e-30 136.3 271 42.8
Nitab4.5_0007855g0090 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.1e-30 135.6 256 43.0
Nitab4.5_0000091g0150 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.2e-29 134.8 138 56.5
Nitab4.5_0007855g0080 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.2e-29 134.8 93 72.0
Peaxi162Scf00664g00012 Petunia axillaris HOM05D000164 ORTHO05D010915 3.9e-28 129.8 331 31.7
Nitab4.5_0000688g0240 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.6e-28 129.0 109 66.1
Nitab4.5_0002943g0080 Nicotiana tabacum HOM05D007644 ORTHO05D286396 6.6e-28 129.0 209 47.4
Nitab4.5_0000688g0180 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.1e-27 128.3 99 66.7
Nitab4.5_0002943g0050 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.2e-26 122.5 139 51.8
Nitab4.5_0000688g0220 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.1e-25 121.7 84 76.2
Nitab4.5_0002943g0060 Nicotiana tabacum HOM05D007644 ORTHO05D286493 3.1e-25 120.2 93 67.7
Nitab4.5_0002943g0130 Nicotiana tabacum HOM05D007644 ORTHO05D286268 4.0e-25 119.8 93 67.7
PGSC0003DMG400029116 Solanum tuberosum HOM05D000164 ORTHO05D010915 4.0e-25 119.8 335 30.1
Nitab4.5_0007855g0070 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.2e-24 118.2 141 51.1
Nitab4.5_0002943g0110 Nicotiana tabacum HOM05D007644 ORTHO05D282284 2.2e-23 114.0 177 46.9
Nitab4.5_0000091g0160 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.9e-23 113.6 138 50.7
Nitab4.5_0001374g0160 Nicotiana tabacum HOM05D007644 ORTHO05D284644 4.9e-23 112.8 167 46.7
Nitab4.5_0000091g0240 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.1e-22 111.7 141 49.6
Nitab4.5_0000091g0170 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.2e-22 109.8 123 52.0
Nitab4.5_0002943g0140 Nicotiana tabacum HOM05D007644 ORTHO05D286073 1.7e-20 104.4 96 58.3
Nitab4.5_0001374g0060 Nicotiana tabacum HOM05D007644 ORTHO05D285281 5.1e-20 102.8 59 84.7
Nitab4.5_0000375g0120 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.3e-19 99.8 79 63.3
Nitab4.5_0007855g0030 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.2e-18 95.9 138 44.9
Nitab4.5_0000091g0080 Nicotiana tabacum HOM05D007644 ORTHO05D282924 9.0e-17 92.0 79 62.0
Nitab4.5_0001374g0040 Nicotiana tabacum HOM05D007644 ORTHO05D284229 1.2e-16 91.7 116 56.0
Nitab4.5_0001374g0050 Nicotiana tabacum HOM05D007644 ORTHO05D284814 3.4e-16 90.1 100 54.0
Nitab4.5_0000091g0120 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.5e-16 89.7 71 67.6
Nitab4.5_0001374g0100 Nicotiana tabacum HOM05D007644 ORTHO05D284824 1.3e-15 88.2 59 72.9
Nitab4.5_0002943g0120 Nicotiana tabacum HOM05D007644 ORTHO05D284943 2.2e-15 87.4 98 58.2
Nitab4.5_0007855g0040 Nicotiana tabacum HOM05D007644 ORTHO05D284753 6.4e-15 85.9 81 63.0
Nitab4.5_0003647g0100 Nicotiana tabacum HOM05D007644 ORTHO05D285057 8.4e-15 85.5 94 53.2
Nitab4.5_0007855g0060 Nicotiana tabacum HOM05D007644 ORTHO05D010915 8.4e-15 85.5 103 54.4
Nitab4.5_0000032g0210 Nicotiana tabacum HOM05D007644 ORTHO05D285251 4.2e-14 83.2 154 36.4
Nitab4.5_0000688g0190 Nicotiana tabacum HOM05D007644 ORTHO05D283563 4.2e-14 83.2 63 69.8
Sopen04g022490 Solanum pennellii HOM05D000164 ORTHO05D010915 5.4e-14 82.8 263 28.9
Nitab4.5_0000091g0200 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.1e-14 82.4 177 38.4
Nitab4.5_0002943g0160 Nicotiana tabacum HOM05D007644 ORTHO05D286775 1.6e-13 81.3 47 87.2
Nitab4.5_0001374g0200 Nicotiana tabacum HOM05D007644 ORTHO05D286419 2.1e-13 80.9 98 53.1
Nitab4.5_0002211g0220 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.1e-13 80.9 60 70.0
Nitab4.5_0000688g0270 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.7e-13 80.5 85 58.8
Nitab4.5_0008374g0060 Nicotiana tabacum HOM05D007644 ORTHO05D283712 3.5e-13 80.1 145 46.2
Nitab4.5_0000091g0180 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.9e-13 79.0 80 55.0
Nitab4.5_0001374g0150 Nicotiana tabacum HOM05D007644 ORTHO05D282285 1.3e-12 78.2 99 49.5
Nitab4.5_0001374g0140 Nicotiana tabacum HOM05D007644 ORTHO05D282997 3.0e-12 77.0 64 65.6
Nitab4.5_0000688g0250 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.9e-12 76.6 78 53.8
Nitab4.5_0002211g0200 Nicotiana tabacum HOM05D007644 ORTHO05D010915 8.7e-12 75.5 80 51.2
Nitab4.5_0000091g0250 Nicotiana tabacum HOM05D007644 ORTHO05D283046 1.3e-10 71.6 74 52.7
Nitab4.5_0001374g0180 Nicotiana tabacum HOM05D007644 ORTHO05D283541 1.6e-10 71.2 48 79.2
Nitab4.5_0008374g0040 Nicotiana tabacum HOM05D007644 ORTHO05D282937 1.6e-10 71.2 65 58.5
Nitab4.5_0002943g0150 Nicotiana tabacum HOM05D007644 ORTHO05D285905 2.8e-10 70.5 74 54.1
Nitab4.5_0000961g0090 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.8e-09 67.8 47 74.5
Nitab4.5_0002211g0210 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.0e-09 66.6 58 62.1
Nitab4.5_0009785g0030 Nicotiana tabacum HOM05D007644 ORTHO05D010915 5.3e-09 66.2 79 43.0
Sed0018662 Sechium edule HOM05D000164 ORTHO05D000096 2.0e-08 64.3 342 24.3
Sopen04g027160 Solanum pennellii HOM05D007644 ORTHO05D010915 2.6e-08 63.9 87 41.4
FvH4_2g38270 Fragaria vesca HOM05D000164 ORTHO05D000096 7.6e-08 62.4 339 23.6
CSS0024355 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 9.9e-08 62.0 322 24.2
CARHR103990 Cardamine hirsuta HOM05D000164 ORTHO05D000096 1.7e-07 61.2 335 24.8
CANSAT01G0910 Cannabis sativa HOM05D000164 ORTHO05D000096 2.2e-07 60.8 335 23.0
Nitab4.5_0003000g0040 Nicotiana tabacum HOM05D007644 ORTHO05D285181 2.2e-07 60.8 105 39.0
Potri.010G090000 Populus trichocarpa HOM05D000164 ORTHO05D000096 2.2e-07 60.8 334 23.4
Nitab4.5_0002211g0180 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.9e-07 60.5 76 50.0
Carub.0006s2410 Capsella rubella HOM05D000164 ORTHO05D000096 3.8e-07 60.1 339 23.3
COL.COLO4_07138 Corchorus olitorius HOM05D000164 ORTHO05D000096 3.8e-07 60.1 341 25.5
Thhalv10005579m.g Eutrema salsugineum HOM05D000164 ORTHO05D000096 4.9e-07 59.7 347 23.6
CSS0040928 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 8.4e-07 58.9 343 22.2
COL.COLO4_04731 Corchorus olitorius HOM05D000164 ORTHO05D000096 8.4e-07 58.9 341 25.2
COL.COLO4_37138 Corchorus olitorius HOM05D000164 ORTHO05D000096 8.4e-07 58.9 341 24.9
RcHm_v2.0_Chr4g0416631 Rosa chinensis HOM05D000164 ORTHO05D000096 8.4e-07 58.9 342 23.4
A06p36770 Brassica napus HOM05D000164 ORTHO05D000096 1.1e-06 58.5 341 23.5
BraA06t26601Z Brassica rapa HOM05D000164 ORTHO05D000096 1.1e-06 58.5 341 23.5
COL.COLO4_04729 Corchorus olitorius HOM05D000164 ORTHO05D000096 1.1e-06 58.5 341 25.2
Nitab4.5_0003647g0110 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.1e-06 58.5 52 63.5
Prupe.6G358900 Prunus persica HOM05D000164 ORTHO05D000096 1.1e-06 58.5 341 23.8
QL07p013101 Quercus lobata HOM05D000164 ORTHO05D000096 1.1e-06 58.5 333 22.8
Ciclev10004752m.g Citrus clementina HOM05D000164 ORTHO05D000096 1.4e-06 58.2 335 23.6
COL.COLO4_06191 Corchorus olitorius HOM05D000164 ORTHO05D000096 1.4e-06 58.2 335 24.2
Rhsim04G0205600 Rhododendron simsii HOM05D000164 ORTHO05D000096 1.4e-06 58.2 336 22.3
CSS0018324 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 1.9e-06 57.8 343 22.2
COL.COLO4_10237 Corchorus olitorius HOM05D000164 ORTHO05D000096 1.9e-06 57.8 341 24.9
Haze_00921 Corylus avellana HOM05D000164 ORTHO05D000096 1.9e-06 57.8 337 24.0
Duzib151G0388 Durio zibethinus HOM05D000164 ORTHO05D000096 1.9e-06 57.8 340 22.6
Actinidia40175 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.5e-06 57.4 335 23.0
AL3G44080 Arabidopsis lyrata HOM05D000164 ORTHO05D000096 2.5e-06 57.4 344 24.1
Nitab4.5_0000091g0190 Nicotiana tabacum HOM05D007644 ORTHO05D283870 2.5e-06 57.4 92 44.6
CSS0011579 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 3.2e-06 57.0 335 23.3
COL.COLO4_06190 Corchorus olitorius HOM05D000164 ORTHO05D000096 3.2e-06 57.0 342 24.6
MD13G1190300 Malus domestica HOM05D000164 ORTHO05D000096 3.2e-06 57.0 338 22.5
Nitab4.5_0002943g0070 Nicotiana tabacum HOM05D007644 ORTHO05D283611 3.2e-06 57.0 37 75.7
COL.COLO4_10238 Corchorus olitorius HOM05D000164 ORTHO05D000096 4.2e-06 56.6 341 24.9
COL.COLO4_31972 Corchorus olitorius HOM05D000164 ORTHO05D000096 4.2e-06 56.6 341 24.3
Potri.007G073900 Populus trichocarpa HOM05D000164 ORTHO05D000096 4.2e-06 56.6 336 22.3
Aqoxy2G03357 Aquilegia oxysepala HOM05D000164 ORTHO05D000096 5.5e-06 56.2 353 22.1
MELO3C006542.2 Cucumis melo HOM05D000164 ORTHO05D000096 5.5e-06 56.2 335 23.9
Nitab4.5_0004199g0010 Nicotiana tabacum HOM05D000164 ORTHO05D000096 5.5e-06 56.2 343 22.4
PSO017G1246 Papaver somniferum HOM05D000164 ORTHO05D000096 5.5e-06 56.2 340 22.6
PSO017G3189 Papaver somniferum HOM05D000164 ORTHO05D000096 5.5e-06 56.2 340 22.9
RcHm_v2.0_Chr6g0256941 Rosa chinensis HOM05D000164 ORTHO05D000096 5.5e-06 56.2 335 22.1
Carub.0006s2104 Capsella rubella HOM05D000164 ORTHO05D000096 7.1e-06 55.8 335 22.7
Duzib168G1539 Durio zibethinus HOM05D000164 ORTHO05D000096 7.1e-06 55.8 341 21.7
Medtr0204s0040 Medicago truncatula HOM05D000164 ORTHO05D000096 7.1e-06 55.8 339 24.2
Medtr4g116770 Medicago truncatula HOM05D000164 ORTHO05D000096 7.1e-06 55.8 339 24.2
PSO017G3219 Papaver somniferum HOM05D000164 ORTHO05D000096 7.1e-06 55.8 338 23.7
AT5G23270 Arabidopsis thaliana HOM05D000164 ORTHO05D000096 9.3e-06 55.5 335 22.4
Gohir.A05G090100 Gossypium hirsutum HOM05D000164 ORTHO05D000096 9.3e-06 55.5 333 21.6
Gohir.D05G091000 Gossypium hirsutum HOM05D000164 ORTHO05D000096 9.3e-06 55.5 333 21.6
Gorai.009G093500 Gossypium raimondii HOM05D000164 ORTHO05D000096 9.3e-06 55.5 333 21.6
MBI01_g40484_MAGBIO Magnolia biondii HOM05D000164 ORTHO05D000096 9.3e-06 55.5 340 21.8
Manes.15G027300 Manihot esculenta HOM05D000164 ORTHO05D000096 9.3e-06 55.5 342 21.9
Oeu030754.1 Olea europaea HOM05D000164 ORTHO05D000096 9.3e-06 55.5 344 20.3
PSO478G2987 Papaver somniferum HOM05D000164 ORTHO05D000096 9.3e-06 55.5 340 22.6
Solyc09g075820.3 Solanum lycopersicum HOM05D000164 ORTHO05D000096 9.3e-06 55.5 341 22.0


User provided reference genes

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