Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001367g0090 Nicotiana tabacum HOM05D016109 ORTHO05D285830 3.0e-290 1001.1 506 100.0
Nitab4.5_0008492g0050 Nicotiana tabacum HOM05D016109 ORTHO05D282316 1.4e-167 593.6 519 65.1
Nitab4.5_0002413g0010 Nicotiana tabacum HOM05D016109 ORTHO05D013097 1.1e-109 401.4 391 58.6
Nitab4.5_0002137g0200 Nicotiana tabacum HOM05D016109 ORTHO05D284390 4.2e-98 362.8 475 49.5
Nitab4.5_0009529g0020 Nicotiana tabacum HOM05D016109 ORTHO05D010293 1.7e-51 208.0 169 62.1
Nitab4.5_0001534g0060 Nicotiana tabacum HOM05D016109 ORTHO05D010293 8.0e-41 172.6 221 48.0
Nitab4.5_0000329g0010 Nicotiana tabacum HOM05D016109 ORTHO05D283231 3.7e-30 137.1 104 63.5
Nitab4.5_0001939g0010 Nicotiana tabacum HOM05D016109 ORTHO05D283472 1.1e-29 135.6 118 59.3
Nitab4.5_0000577g0030 Nicotiana tabacum HOM05D027478 ORTHO05D283363 9.8e-15 85.9 93 54.8
Nitab4.5_0002063g0030 Nicotiana tabacum HOM05D027478 ORTHO05D008893 1.7e-11 75.1 272 29.0
Nitab4.5_0001362g0120 Nicotiana tabacum HOM05D027478 ORTHO05D283050 3.6e-09 67.4 160 35.0
Eucgr.C01179 Eucalyptus grandis HOM05D000222 ORTHO05D000329 8.9e-08 62.8 74 50.0
Glyma.02G302500 Glycine max HOM05D000222 ORTHO05D000329 2.0e-07 61.6 85 44.7
Glyma.14G011600 Glycine max HOM05D000222 ORTHO05D000329 2.0e-07 61.6 85 44.7
Nitab4.5_0004393g0020 Nicotiana tabacum HOM05D024642 ORTHO05D010293 2.0e-07 61.6 57 52.6
HPP92_017980 Vanilla planifolia HOM05D000222 ORTHO05D000329 2.0e-07 61.6 85 44.7
Nitab4.5_0003760g0010 Nicotiana tabacum HOM05D026919 ORTHO05D283457 5.8e-07 60.1 149 32.2
CiPaw.11G207100 Carya illinoinensis HOM05D000222 ORTHO05D000329 9.8e-07 59.3 85 43.5
Duzib170G0363 Durio zibethinus HOM05D000222 ORTHO05D000329 9.8e-07 59.3 85 43.5
Lalb_Chr04g0247761 Lupinus albus HOM05D000222 ORTHO05D000329 9.8e-07 59.3 85 43.5
MBI14_g11782_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 9.8e-07 59.3 85 43.5
Manes.01G003800 Manihot esculenta HOM05D000222 ORTHO05D000329 9.8e-07 59.3 85 43.5
HPP92_018933 Vanilla planifolia HOM05D000222 ORTHO05D000329 9.8e-07 59.3 85 43.5
arahy.Tifrunner.gnm1.ann1.B8WNJH Arachis hypogaea HOM05D000222 ORTHO05D000329 1.3e-06 58.9 86 43.0
arahy.Tifrunner.gnm1.ann1.H890L5 Arachis hypogaea HOM05D000222 ORTHO05D000329 1.3e-06 58.9 86 43.0
THA.LOC104813457 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 1.3e-06 58.9 86 43.0
TWI38G1210 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.3e-06 58.9 86 43.0
MSTRG.13033 Avicennia marina HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
MSTRG.17132 Avicennia marina HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
CSS0039305 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
CSS0043537 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
CAN.G623.37 Capsicum annuum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
ClCG00G005640 Citrullus lanatus HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
ClCG03G017240 Citrullus lanatus HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
ClCG03G017260 Citrullus lanatus HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
COL.COLO4_07743 Corchorus olitorius HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
MELO3C027461.2 Cucumis melo HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
CsaV3_1G038690 Cucumis sativus L. HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
CsaV3_1G038710 Cucumis sativus L. HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Duzib213G0472 Durio zibethinus HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Duzib268G0852 Durio zibethinus HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Gohir.A08G025500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Gohir.D08G036000 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Gohir.D13G133900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Gorai.004G033900 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Gorai.004G034000 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Gorai.013G150300 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Lalb_Chr20g0115331 Lupinus albus HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Manes.05G203300 Manihot esculenta HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Nitab4.5_0000152g0350 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Nitab4.5_0000598g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Nitab4.5_0003130g0050 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Nitab4.5_0006030g0020 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Nitab4.5_0008194g0050 Nicotiana tabacum HOM05D027478 ORTHO05D282549 1.7e-06 58.5 78 47.4
Sed0002071 Sechium edule HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
TWI39G0154 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.7e-06 58.5 86 41.9
HPP92_026711 Vanilla planifolia HOM05D000222 ORTHO05D000329 1.7e-06 58.5 85 43.5
Cc05_g15320 Coffea canephora HOM05D000222 ORTHO05D000329 2.2e-06 58.2 85 42.4
Lj2C255T5 Lonicera japonica HOM05D000222 ORTHO05D000329 2.2e-06 58.2 85 42.4
Gohir.A08G025400 Gossypium hirsutum HOM05D000222 ORTHO05D000329 2.9e-06 57.8 85 42.4
TWI38G0590 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 2.9e-06 57.8 86 41.9
Aqoxy1G02739 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 3.7e-06 57.4 85 41.2
Nn1g07578 Nelumbo nucifera HOM05D000222 ORTHO05D000329 3.7e-06 57.4 85 42.4
Solyc07g065840.2 Solanum lycopersicum HOM05D000222 ORTHO05D000329 3.7e-06 57.4 85 42.4
THA.LOC104822721 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 3.7e-06 57.4 85 42.4
MSTRG.14505 Avicennia marina HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 42.4
A02p09400 Brassica napus HOM05D000222 ORTHO05D000329 4.9e-06 57.0 86 41.9
A02p09460 Brassica napus HOM05D000222 ORTHO05D000329 4.9e-06 57.0 86 41.9
BraA02t06004Z Brassica rapa HOM05D000222 ORTHO05D000329 4.9e-06 57.0 86 41.9
CiPaw.12G141000 Carya illinoinensis HOM05D000222 ORTHO05D000329 4.9e-06 57.0 86 41.9
ECA240G2702 Erigeron canadensis HOM05D000222 ORTHO05D000329 4.9e-06 57.0 86 40.7
Gorai.002G103000 Gossypium raimondii HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 42.4
Lj1C1249T2 Lonicera japonica HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 41.2
Lj2C1030T14 Lonicera japonica HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 41.2
QL05p066621 Quercus lobata HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 42.4
Sc03g0011510 Simmondsia chinensis HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 42.4
TAR626G0472 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.9e-06 57.0 85 42.4
Cpa.g.sc12.106 Carica papaya HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 42.4
LjContig00081g0000981 Lotus japonicus HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 42.4
Nn1g07731 Nelumbo nucifera HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 42.4
Potri.001G286700 Populus trichocarpa HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 42.4
Solyc12g015880.2 Solanum lycopersicum HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 41.2
Sopen12g007780 Solanum pennellii HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 41.2
PGSC0003DMG400022159 Solanum tuberosum HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 41.2
Thecc.07G007700 Theobroma cacao HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 42.4
GSVIVG01003469001 Vitis vinifera HOM05D000222 ORTHO05D000329 6.4e-06 56.6 85 42.4
Gohir.A13G130500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Oeu046944.1 Olea europaea HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 41.2
Os08g0500700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Os09g0482100 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Os09g0482400 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Os09g0482600 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Peaxi162Scf00232g00030 Petunia axillaris HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Peaxi162Scf00444g00238 Petunia axillaris HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Potri.016G003400 Populus trichocarpa HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 41.2
Prupe.6G028600 Prunus persica HOM05D000222 ORTHO05D000329 8.3e-06 56.2 86 41.9
Rhsim06G0232600 Rhododendron simsii HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 41.2
VMungo0647G1295 Vigna mungo HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
VMungo0647G1375 Vigna mungo HOM05D000121 ORTHO05D000102 8.3e-06 56.2 85 42.4
Zm00001eb101750 Zea mays HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4
Zm00001eb316410 Zea mays HOM05D000222 ORTHO05D000329 8.3e-06 56.2 85 42.4


User provided reference genes

Program Settings