Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.6e-103 379.4 191 100.0
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 6.8e-94 347.4 188 93.6
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 6.8e-94 347.4 188 93.6
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 2.0e-93 345.9 213 86.4
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 3.1e-86 322.0 193 86.5
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 1.5e-85 319.7 210 82.4
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.8e-57 226.5 191 62.8
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 2.5e-56 222.6 184 63.0
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 7.6e-53 211.1 179 60.9
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 6.5e-52 208.0 182 57.7
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 3.2e-51 205.7 180 58.3
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 6.0e-50 201.4 180 59.4
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 1.3e-49 200.3 186 55.9
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 2.3e-49 199.5 184 55.4
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 2.5e-48 196.1 182 56.0
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 5.7e-48 194.9 181 56.9
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 1.6e-47 193.4 185 55.1
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 2.8e-47 192.6 185 53.0
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 4.8e-47 191.8 185 53.5
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.1e-46 190.7 186 55.4
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 1.4e-46 190.3 173 59.5
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 3.1e-46 189.1 173 56.1
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 4.1e-46 188.7 182 55.5
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 6.9e-46 188.0 168 57.1
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 9.0e-46 187.6 184 56.5
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 1.5e-45 186.8 187 52.4
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 2.6e-45 186.0 190 53.2
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.0e-44 184.1 189 53.4
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 1.0e-44 184.1 184 54.9
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.3e-44 183.7 184 53.8
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.7e-44 183.3 175 53.7
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 2.2e-44 183.0 184 56.0
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 3.8e-44 182.2 184 53.8
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 5.0e-44 181.8 179 54.7
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 5.0e-44 181.8 172 54.1
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.4e-43 180.3 184 50.0
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 1.4e-43 180.3 167 56.9
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 2.5e-43 179.5 176 52.8
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 3.2e-43 179.1 191 51.8
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 4.2e-43 178.7 174 50.6
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 4.2e-43 178.7 191 51.8
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 4.2e-43 178.7 172 54.7
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 4.2e-43 178.7 174 52.3
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 5.5e-43 178.3 181 51.9
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 5.5e-43 178.3 187 48.7
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 5.5e-43 178.3 180 53.9
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 5.5e-43 178.3 172 54.1
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 5.5e-43 178.3 180 53.3
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 5.5e-43 178.3 175 55.4
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 9.3e-43 177.6 172 54.1
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 1.2e-42 177.2 173 56.1
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 1.2e-42 177.2 172 54.1
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 2.7e-42 176.0 173 54.9
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 2.7e-42 176.0 178 51.7
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 3.6e-42 175.6 177 52.5
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 3.6e-42 175.6 177 52.5
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 3.6e-42 175.6 174 50.6
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 4.6e-42 175.3 188 49.5
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 4.6e-42 175.3 182 50.0
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 1.0e-41 174.1 179 53.1
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 1.0e-41 174.1 179 53.1
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 2.3e-41 172.9 189 49.2
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 5.1e-41 171.8 180 53.9
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 6.7e-41 171.4 189 48.7
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 1.5e-40 170.2 175 51.4
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 3.3e-40 169.1 174 52.3
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 5.7e-40 168.3 172 51.2
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 5.7e-40 168.3 172 51.2
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 5.7e-40 168.3 184 50.5
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 4.8e-39 165.2 177 50.3
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.1e-38 164.1 168 53.6
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.4e-38 163.7 181 48.6
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.8e-38 163.3 175 52.0
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 2.4e-38 162.9 177 51.4
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 4.1e-38 162.2 179 50.8
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 4.1e-38 162.2 179 50.8
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 4.1e-38 162.2 182 47.8
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 6.9e-38 161.4 179 50.8
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 1.2e-37 160.6 180 46.1
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 3.4e-37 159.1 188 48.4
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 4.5e-37 158.7 182 47.8
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 5.9e-37 158.3 207 43.5
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 5.9e-37 158.3 173 54.3
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 6.5e-36 154.8 176 46.0
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 1.9e-35 153.3 192 48.4
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 9.4e-35 151.0 176 47.2
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 3.6e-34 149.1 187 43.9
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 1.0e-33 147.5 155 54.8
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 1.8e-33 146.7 110 63.6
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 3.9e-33 145.6 175 47.4
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 8.8e-33 144.4 121 62.8
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 1.1e-32 144.1 185 44.3
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 1.5e-32 143.7 181 43.1
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 2.8e-31 139.4 154 48.7
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 5.3e-30 135.2 89 70.8
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 2.0e-29 133.3 212 37.7
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 4.5e-29 132.1 166 42.2
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 1.4e-27 127.1 183 42.1
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 4.2e-27 125.6 178 42.7
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 5.5e-27 125.2 177 42.4
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.6e-26 123.6 173 41.0
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 2.1e-26 123.2 176 46.6
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 3.0e-25 119.4 148 44.6
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.0e-24 116.7 68 77.9
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 2.6e-24 116.3 153 39.9
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 7.4e-24 114.8 198 39.9
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 7.4e-24 114.8 198 39.9
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.3e-23 114.0 78 66.7
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 6.3e-23 111.7 164 39.0
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 9.1e-22 107.8 107 49.5
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 2.0e-21 106.7 173 40.5
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 9.4e-19 97.8 161 37.9
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 3.6e-18 95.9 72 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 5.2e-17 92.0 115 40.0
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 2.7e-13 79.7 67 59.7
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 2.9e-12 76.3 63 61.9
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.6e-10 69.3 68 54.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 4.7e-10 68.9 143 33.6
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 6.1e-10 68.6 155 35.5
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 3.1e-06 56.2 105 31.4


User provided reference genes

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