Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.4e-99 366.3 190 100.0
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.5e-53 213.4 114 94.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 6.4e-52 208.0 131 82.4
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.1e-51 207.2 114 91.2
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.4e-51 206.1 114 91.2
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 4.0e-46 188.7 114 84.2
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.0e-41 174.1 165 60.6
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.8e-38 163.3 104 74.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 5.3e-38 161.8 109 71.6
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 2.6e-37 159.5 107 71.0
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 7.6e-37 157.9 131 62.6
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.0e-36 157.5 109 75.2
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 4.9e-36 155.2 106 72.6
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 8.4e-36 154.5 112 68.8
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.1e-35 154.1 172 48.8
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.9e-35 153.3 114 67.5
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 3.2e-35 152.5 109 67.0
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 4.2e-35 152.1 135 57.0
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 5.5e-35 151.8 121 62.0
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 9.3e-35 151.0 171 52.6
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.2e-34 150.6 104 70.2
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.2e-34 150.6 99 72.7
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.2e-34 150.6 107 69.2
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.1e-34 149.8 109 69.7
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 2.1e-34 149.8 111 68.5
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.7e-34 149.4 114 66.7
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.6e-34 148.7 115 65.2
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 4.6e-34 148.7 114 66.7
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 7.9e-34 147.9 97 72.2
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 7.9e-34 147.9 106 65.1
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.0e-33 147.5 103 68.9
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.3e-33 147.1 106 64.2
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 3.0e-33 146.0 105 67.6
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 5.1e-33 145.2 126 57.9
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 6.7e-33 144.8 97 69.1
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 6.7e-33 144.8 115 63.5
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 8.7e-33 144.4 104 65.4
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.5e-32 143.7 100 67.0
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.9e-32 143.3 107 64.5
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.9e-32 143.3 107 64.5
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.9e-32 143.3 104 64.4
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.9e-32 143.3 94 71.3
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.5e-32 142.9 97 69.1
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 3.3e-32 142.5 105 66.7
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 3.3e-32 142.5 96 72.9
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 4.3e-32 142.1 109 66.1
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 4.3e-32 142.1 112 63.4
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 7.4e-32 141.4 104 65.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 9.6e-32 141.0 97 72.2
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 9.6e-32 141.0 109 62.4
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.3e-31 140.6 99 69.7
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.6e-31 140.2 98 67.3
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 2.1e-31 139.8 116 60.3
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.8e-31 139.4 106 60.4
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 2.8e-31 139.4 94 68.1
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.8e-31 139.4 112 60.7
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.8e-31 139.4 106 62.3
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 3.7e-31 139.0 96 68.8
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 4.8e-31 138.7 94 68.1
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 4.8e-31 138.7 94 68.1
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 8.2e-31 137.9 96 68.8
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.4e-30 137.1 94 71.3
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.8e-30 136.7 107 60.7
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.8e-30 136.7 111 60.4
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.8e-30 136.7 97 68.0
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 2.4e-30 136.3 131 59.5
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 5.3e-30 135.2 94 70.2
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.5e-29 133.7 107 57.0
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 2.0e-29 133.3 98 66.3
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 7.6e-29 131.3 97 63.9
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.6e-29 131.3 113 59.3
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 1.0e-28 131.0 97 62.9
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.3e-28 130.6 101 63.4
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.7e-28 130.2 111 59.5
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 2.2e-28 129.8 98 63.3
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.9e-28 129.4 122 54.1
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 2.9e-28 129.4 94 67.0
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 5.0e-28 128.6 96 61.5
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.5e-27 126.3 98 59.2
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.5e-27 126.3 108 57.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 7.2e-27 124.8 104 57.7
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.2e-26 124.0 96 60.4
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 2.7e-26 122.9 123 52.0
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.5e-26 122.5 95 60.0
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 3.5e-26 122.5 128 53.9
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 4.6e-26 122.1 104 56.7
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 4.6e-26 122.1 104 56.7
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 4.6e-26 122.1 104 56.7
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 3.0e-25 119.4 98 55.1
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 6.7e-25 118.2 104 54.8
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 6.7e-25 118.2 100 57.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.5e-24 117.1 85 64.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.6e-23 113.6 92 57.6
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.6e-23 113.6 92 57.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 1.6e-23 113.6 109 56.0
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 3.7e-23 112.5 86 66.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 5.3e-22 108.6 75 69.3
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 9.0e-22 107.8 79 65.8
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 8.5e-20 101.3 75 60.0
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 4.2e-19 99.0 69 71.0
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 7.2e-19 98.2 101 51.5
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.2e-18 97.4 114 48.2
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 3.0e-17 92.8 98 44.9
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 6.7e-17 91.7 69 59.4
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 8.8e-17 91.3 98 44.9
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.5e-16 89.7 81 54.3
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 8.2e-15 84.7 92 44.6
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.4e-14 83.2 114 43.9
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 1.3e-12 77.4 96 41.7
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 7.9e-10 68.2 62 59.7


User provided reference genes

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