Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 9.5e-71 270.4 172 100.0
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 7.3e-55 217.6 195 70.8
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 1.1e-47 193.7 201 73.1
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 2.5e-47 192.6 201 73.1
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 3.3e-47 192.2 205 60.5
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 9.6e-47 190.7 198 60.1
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 2.2e-35 152.9 194 47.9
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.4e-35 151.0 185 48.6
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 1.1e-34 150.6 196 53.6
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 7.1e-34 147.9 192 48.4
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 1.2e-33 147.1 199 47.2
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 3.5e-33 145.6 220 55.5
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.0e-32 144.1 194 47.4
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 1.3e-32 143.7 184 46.7
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 1.8e-32 143.3 188 46.3
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 3.0e-32 142.5 188 45.7
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 3.0e-32 142.5 191 46.6
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 3.9e-32 142.1 196 45.9
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 8.7e-32 141.0 222 47.7
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 1.9e-31 139.8 204 46.1
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.9e-31 139.8 187 47.1
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 3.3e-31 139.0 196 45.9
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.3e-31 139.0 189 46.0
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 3.3e-31 139.0 193 47.7
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 4.3e-31 138.7 210 43.8
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 5.7e-31 138.3 197 44.7
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 1.3e-30 137.1 191 49.7
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.6e-30 136.7 197 45.2
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 2.8e-30 136.0 204 44.6
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 2.8e-30 136.0 196 44.9
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 3.7e-30 135.6 189 44.4
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.7e-30 135.6 196 43.4
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 4.8e-30 135.2 192 44.8
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 8.2e-30 134.4 201 46.8
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 1.8e-29 133.3 189 45.5
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.4e-29 132.9 192 53.6
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.4e-29 132.9 192 53.6
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 2.4e-29 132.9 188 44.1
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 2.4e-29 132.9 214 47.7
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 2.4e-29 132.9 207 48.3
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 3.1e-29 132.5 214 47.7
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 3.1e-29 132.5 192 43.2
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 4.1e-29 132.1 191 45.0
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 5.3e-29 131.7 200 43.5
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 6.9e-29 131.3 191 45.0
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 6.9e-29 131.3 191 45.0
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 6.9e-29 131.3 202 46.0
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 9.0e-29 131.0 200 44.5
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 9.0e-29 131.0 208 44.2
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.2e-28 130.6 188 44.1
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.0e-28 129.8 198 44.9
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 3.4e-28 129.0 190 40.5
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 3.4e-28 129.0 195 44.1
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 4.5e-28 128.6 199 44.2
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.5e-28 128.6 188 43.6
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.9e-28 128.3 188 43.1
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 7.6e-28 127.9 179 56.4
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 7.6e-28 127.9 187 51.3
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 7.6e-28 127.9 193 44.0
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 1.0e-27 127.5 203 43.8
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 1.3e-27 127.1 210 53.3
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 1.7e-27 126.7 204 45.1
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 3.8e-27 125.6 191 44.0
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 5.0e-27 125.2 210 44.3
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.0e-27 125.2 191 42.9
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 5.0e-27 125.2 185 51.4
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 5.0e-27 125.2 188 44.7
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 5.0e-27 125.2 186 44.1
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 6.5e-27 124.8 164 46.3
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 6.5e-27 124.8 165 55.8
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 8.5e-27 124.4 181 49.2
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 8.5e-27 124.4 191 52.9
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 1.1e-26 124.0 197 55.3
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.1e-26 124.0 200 45.5
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.4e-26 123.6 197 55.3
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.2e-26 121.3 184 41.8
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 1.6e-25 120.2 185 47.0
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 2.7e-25 119.4 201 41.3
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 3.6e-25 119.0 194 54.1
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 1.3e-24 117.1 188 56.4
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 3.0e-24 115.9 200 41.0
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 5.1e-24 115.2 186 41.4
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 6.7e-24 114.8 181 44.2
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 1.1e-23 114.0 196 54.1
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 1.1e-23 114.0 175 44.0
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.5e-23 113.6 194 40.7
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 2.5e-23 112.8 181 38.7
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 2.5e-23 112.8 181 38.7
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 3.3e-23 112.5 181 40.3
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 4.3e-23 112.1 161 43.5
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 7.4e-23 111.3 198 40.9
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 7.4e-23 111.3 193 53.4
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 1.3e-22 110.5 178 47.2
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 1.3e-22 110.5 191 39.3
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.7e-22 110.2 174 53.4
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 2.8e-22 109.4 164 42.1
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 6.3e-22 108.2 177 49.7
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 1.1e-21 107.5 174 42.5
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 6.9e-21 104.8 174 42.5
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 1.5e-20 103.6 266 34.2
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 1.5e-20 103.6 182 41.8
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.6e-20 102.8 186 39.2
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.4e-20 102.4 170 44.1
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 4.5e-20 102.1 193 49.7
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 1.0e-19 100.9 230 46.1
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 1.0e-19 100.9 230 46.1
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.3e-19 100.5 181 53.6
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 1.3e-19 100.5 171 38.6
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 8.5e-19 97.8 164 45.1
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 8.5e-19 97.8 164 45.1
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 2.7e-17 92.8 168 44.6
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 6.1e-17 91.7 152 40.1
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 2.3e-16 89.7 160 39.4
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 1.1e-15 87.4 159 35.2
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 2.0e-15 86.7 171 39.2
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 7.4e-15 84.7 142 40.1
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 9.7e-15 84.3 158 35.4
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.1e-13 80.9 117 41.9
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.4e-13 80.5 157 31.2
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 1.8e-13 80.1 161 36.0
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.6e-12 76.3 60 66.7
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.6e-12 76.3 137 39.4
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 4.5e-12 75.5 56 67.9
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 5.9e-12 75.1 180 30.6
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 3.8e-11 72.4 155 36.8
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 4.7e-09 65.5 90 46.7
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.0e-08 64.3 49 59.2
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 3.9e-08 62.4 152 30.9
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.0e-07 60.1 166 32.5
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 2.0e-07 60.1 155 51.6
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 9.7e-07 57.8 38 71.1


User provided reference genes

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