Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001354g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 3.3e-192 674.9 335 100.0
Nitab4.5_0000165g0040 Nicotiana tabacum HOM05D002350 ORTHO05D000091 5.0e-124 448.4 335 72.2
Sopen06g017060 Solanum pennellii HOM05D002350 ORTHO05D000091 5.9e-117 424.9 338 68.6
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 1.4e-113 413.7 338 67.2
Peaxi162Scf00824g00114 Petunia axillaris HOM05D002350 ORTHO05D000091 3.8e-108 395.6 349 65.0
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 8.1e-58 228.4 350 42.6
CAN.G160.39 Capsicum annuum HOM05D002350 ORTHO05D000091 6.9e-57 225.3 256 53.5
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 4.4e-56 222.6 333 42.0
Rhsim03G0237700 Rhododendron simsii HOM05D002350 ORTHO05D000091 3.0e-52 209.9 317 42.9
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 8.7e-52 208.4 369 39.3
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 2.8e-50 203.4 350 39.1
Oeu064188.1 Olea europaea HOM05D002350 ORTHO05D000091 3.6e-50 203.0 346 40.2
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 4.8e-50 202.6 347 38.3
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 2.4e-49 200.3 332 44.3
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 2.6e-48 196.8 404 35.9
TAR624G0664 Trochodendron aralioides HOM05D002350 ORTHO05D000091 2.6e-48 196.8 333 40.2
Migut.N01382 Erythranthe guttata HOM05D002350 ORTHO05D000091 3.4e-48 196.4 320 40.6
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 5.8e-48 195.7 332 39.5
Migut.K00531 Erythranthe guttata HOM05D002350 ORTHO05D000091 1.3e-47 194.5 315 38.7
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 4.9e-47 192.6 342 39.8
PGSC0003DMG402000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 8.4e-47 191.8 402 36.1
SalBow5G3880 Salvia bowleyana HOM05D002350 ORTHO05D000091 1.4e-46 191.0 321 40.8
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 2.4e-46 190.3 371 38.5
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 9.3e-46 188.3 334 39.2
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 3.5e-45 186.4 323 39.6
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 1.0e-44 184.9 339 35.7
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 1.3e-44 184.5 352 38.4
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 3.0e-44 183.3 327 37.9
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 2.5e-43 180.3 207 50.2
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 5.6e-43 179.1 336 36.3
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 1.3e-42 177.9 327 37.9
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 1.6e-42 177.6 355 35.5
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 4.8e-42 176.0 334 37.7
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 3.1e-41 173.3 201 46.3
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 3.1e-41 173.3 337 37.4
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 9.0e-41 171.8 333 36.3
Lsat_1_v5_gn_8_96860 Lactuca sativa HOM05D002350 ORTHO05D000091 2.0e-40 170.6 393 33.6
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 2.6e-40 170.2 330 39.1
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 2.6e-40 170.2 329 36.5
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 3.4e-40 169.9 327 36.4
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 5.8e-40 169.1 327 36.4
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 9.9e-40 168.3 340 34.7
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 9.9e-40 168.3 345 37.4
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 1.3e-39 167.9 328 36.6
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 2.9e-39 166.8 334 38.0
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 8.4e-39 165.2 294 40.8
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 1.4e-38 164.5 326 36.2
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 1.9e-38 164.1 173 50.3
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 3.2e-38 163.3 328 35.1
Peaxi162Scf00665g00310 Petunia axillaris HOM05D002350 ORTHO05D000091 3.2e-38 163.3 336 34.8
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 5.5e-38 162.5 328 35.1
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 7.1e-38 162.2 333 36.9
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 1.2e-37 161.4 328 36.3
Oeu064190.1 Olea europaea HOM05D002350 ORTHO05D000091 1.6e-37 161.0 192 46.9
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 6.0e-37 159.1 341 37.2
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 1.3e-36 157.9 327 35.8
HanXRQChr16g0507611 Helianthus annuus HOM05D002350 ORTHO05D000091 1.3e-36 157.9 399 33.3
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 3.0e-36 156.8 329 35.0
Aqoxy7G03876 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 5.1e-36 156.0 355 34.1
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 6.7e-36 155.6 330 34.8
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 2.5e-35 153.7 327 34.6
HanXRQChr16g0503801 Helianthus annuus HOM05D002350 ORTHO05D000091 5.6e-35 152.5 189 45.0
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 1.6e-34 151.0 348 32.8
HanXRQChr16g0503771 Helianthus annuus HOM05D002350 ORTHO05D000091 2.1e-34 150.6 189 44.4
EL10Ac8g18397 Beta vulgaris HOM05D002350 ORTHO05D000091 2.8e-34 150.2 328 35.7
Medtr6g088660 Medicago truncatula HOM05D002350 ORTHO05D000091 2.8e-34 150.2 326 35.6
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 1.8e-33 147.5 328 33.8
Lsat_1_v5_gn_5_144600 Lactuca sativa HOM05D002350 ORTHO05D000091 3.1e-33 146.7 456 28.9
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 5.3e-33 146.0 326 33.7
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 6.9e-33 145.6 320 35.9
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 9.0e-33 145.2 332 33.7
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 1.2e-32 144.8 194 42.8
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 1.5e-32 144.4 298 36.6
Psat1g046880 Pisum sativum HOM05D002350 ORTHO05D000091 1.5e-32 144.4 329 35.9
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 1.5e-32 144.4 303 37.6
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 2.0e-32 144.1 252 38.9
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 4.5e-32 142.9 404 32.2
ATR0705G139 Amborella trichopoda HOM05D002350 ORTHO05D000091 7.6e-32 142.1 330 33.0
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 1.0e-31 141.7 412 30.8
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 1.3e-31 141.4 368 32.6
Eucgr.C03764 Eucalyptus grandis HOM05D002350 ORTHO05D000091 2.2e-31 140.6 328 30.5
TPR.G21372 Trifolium pratense HOM05D002350 ORTHO05D000091 4.9e-31 139.4 321 33.6
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 6.5e-31 139.0 328 32.9
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 9.3e-30 135.2 332 30.7
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 1.2e-29 134.8 330 33.0
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 1.6e-29 134.4 327 32.7
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 1.6e-29 134.4 330 32.4
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 2.1e-29 134.0 327 30.6
AUR62021425 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.7e-29 133.7 295 33.9
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 1.3e-28 131.3 328 30.5
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 1.8e-28 131.0 330 30.6
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 1.8e-28 131.0 328 33.2
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 3.0e-28 130.2 330 31.2
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 3.9e-28 129.8 328 30.2
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 3.9e-28 129.8 333 30.3
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 5.1e-28 129.4 330 30.6
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 8.7e-28 128.6 328 30.5
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 8.7e-28 128.6 337 31.8
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 8.7e-28 128.6 176 43.8
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 1.1e-27 128.3 182 42.9
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 1.5e-27 127.9 333 30.9
DCAR_018379 Daucus carota HOM05D002350 ORTHO05D000091 1.9e-27 127.5 354 31.1
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 2.5e-27 127.1 331 34.1
A07p00750 Brassica napus HOM05D002350 ORTHO05D000091 2.5e-27 127.1 333 29.7
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 7.4e-27 125.6 337 29.4
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 9.7e-27 125.2 328 34.1
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 9.7e-27 125.2 181 40.9
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.3e-26 124.8 181 40.9
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.3e-26 124.8 181 40.9
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 1.3e-26 124.8 387 30.0
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 2.2e-26 124.0 181 40.9
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 4.8e-26 122.9 327 32.1
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 8.2e-26 122.1 182 41.8
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 1.4e-25 121.3 330 30.9
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 1.4e-25 121.3 181 39.8
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 1.8e-25 120.9 329 32.2
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 2.4e-25 120.6 325 31.7
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 3.1e-25 120.2 182 40.7
RcHm_v2.0_Chr2g0091721 Rosa chinensis HOM05D002350 ORTHO05D000091 3.1e-25 120.2 260 35.4
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 4.1e-25 119.8 331 29.3
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.5e-24 117.9 332 30.1
RcHm_v2.0_Chr2g0091671 Rosa chinensis HOM05D002350 ORTHO05D000091 1.5e-24 117.9 182 40.1
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 2.0e-24 117.5 234 38.0
PSO210G7085 Papaver somniferum HOM05D002350 ORTHO05D000091 2.6e-24 117.1 177 41.2
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.4e-24 116.7 332 31.0
BolC8t51797H Brassica oleracea HOM05D002350 ORTHO05D000091 5.9e-24 115.9 337 30.0
Aqoxy6G02291 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 7.6e-24 115.5 194 36.6
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 1.0e-23 115.2 327 31.2
PSO210G2001 Papaver somniferum HOM05D002350 ORTHO05D000091 1.0e-23 115.2 177 40.7
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 1.7e-23 114.4 178 38.2
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 5.0e-23 112.8 355 29.9
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 9.4e-22 108.6 322 30.4
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 9.4e-22 108.6 167 38.9
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 1.2e-21 108.2 182 36.8
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 7.9e-21 105.5 160 41.2
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 1.0e-20 105.1 322 31.4
Os01g0198100 Oryza sativa ssp. japonica HOM05D002350 ORTHO05D000091 1.0e-20 105.1 266 31.2
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 1.5e-19 101.3 331 27.5
A07p00780 Brassica napus HOM05D002350 ORTHO05D000091 1.9e-19 100.9 325 31.4
Cpa.g.sc40.69 Carica papaya HOM05D002350 ORTHO05D000091 1.9e-19 100.9 253 32.0
BraA07t27871Z Brassica rapa HOM05D002350 ORTHO05D000091 2.5e-19 100.5 321 30.5
Zm00001eb088530 Zea mays HOM05D054927 ORTHO05D000091 2.5e-19 100.5 221 32.1
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 3.3e-19 100.1 132 40.2
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 3.7e-18 96.7 322 28.6
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 3.7e-18 96.7 322 28.6
Hund28809 Selenicereus undatus HOM05D002350 ORTHO05D000091 1.1e-17 95.1 216 33.3
Hund28811 Selenicereus undatus HOM05D002350 ORTHO05D000091 1.1e-17 95.1 216 33.3
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 9.1e-17 92.0 325 28.3
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 1.5e-16 91.3 180 35.0
BolC7t40573H Brassica oleracea HOM05D002350 ORTHO05D000091 2.0e-16 90.9 327 29.4
MBI04_g40931_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 7.7e-16 89.0 213 32.4
AUR62021424 Chenopodium quinoa HOM05D002350 ORTHO05D000091 6.5e-15 85.9 184 31.0
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 3.2e-14 83.6 181 34.3
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 1.5e-11 74.7 51 74.5
SEGI_26853 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 2.0e-11 74.3 187 31.0
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 2.2e-10 70.9 322 28.6
MBI04_g17292_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 2.2e-10 70.9 205 31.7
Sc08g0007930 Simmondsia chinensis HOM05D002350 ORTHO05D000091 2.2e-10 70.9 83 43.4
CSS0047158 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 2.8e-10 70.5 71 50.7
CDE05G2808 Ceratophyllum demersum HOM05D002350 ORTHO05D000091 4.8e-10 69.7 224 27.7
DCAR_010693 Daucus carota HOM05D002350 ORTHO05D000091 1.4e-09 68.2 91 46.2
Hma1.2p1_0571F.1_g180860 Hydrangea macrophylla HOM05D002350 ORTHO05D000091 2.4e-09 67.4 80 48.8
Sabra06G0125300 Salix brachista HOM05D002350 ORTHO05D000091 3.1e-09 67.0 51 52.9
MD15G1195300 Malus domestica HOM05D002350 ORTHO05D000091 5.3e-09 66.2 87 41.4
Rhsim01G0146500 Rhododendron simsii HOM05D026357 ORTHO05D023102 7.0e-09 65.9 197 29.4
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 1.2e-08 65.1 71 47.9
RcHm_v2.0_Chr4g0418181 Rosa chinensis HOM05D002350 ORTHO05D000091 4.5e-08 63.2 84 42.9
Cfa003193 Carpinus fangiana HOM05D002350 ORTHO05D000091 1.3e-07 61.6 81 39.5
arahy.Tifrunner.gnm1.ann1.SM79W1 Arachis hypogaea HOM05D002350 ORTHO05D000091 1.1e-06 58.5 78 39.7
A01p33760 Brassica napus HOM05D002350 ORTHO05D000091 1.4e-06 58.2 52 55.8
AUR62010901 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.4e-06 58.2 94 40.4
CSS0028801 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.9e-06 57.8 33 78.8
Prupe.7G221300 Prunus persica HOM05D022870 ORTHO05D000091 1.9e-06 57.8 126 31.0
Rhsim01G0145900 Rhododendron simsii HOM05D000449 ORTHO05D023102 1.9e-06 57.8 217 28.1


User provided reference genes

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