Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001353g0010 Nicotiana tabacum HOM05D002792 ORTHO05D003039 1.2e-56 223.0 115 100.0
Nitab4.5_0001108g0040 Nicotiana tabacum HOM05D002792 ORTHO05D003039 7.6e-48 193.7 154 72.1
Sopen12g028260 Solanum pennellii HOM05D002792 ORTHO05D003039 1.1e-46 189.9 134 74.6
Peaxi162Scf00133g00726 Petunia axillaris HOM05D002792 ORTHO05D003039 5.4e-46 187.6 131 76.3
CAN.G206.167 Capsicum annuum HOM05D002792 ORTHO05D003039 4.6e-45 184.5 134 73.9
PGSC0003DMG400008780 Solanum tuberosum HOM05D002792 ORTHO05D003039 8.7e-44 180.3 131 72.5
Solyc12g077590.2 Solanum lycopersicum HOM05D002792 ORTHO05D003039 4.0e-41 171.4 125 72.8
Oeu031699.1 Olea europaea HOM05D002792 ORTHO05D003039 1.9e-35 152.5 131 62.6
Dinv29153 Davidia involucrata HOM05D002792 ORTHO05D003039 4.3e-35 151.4 133 60.9
Oeu007513.1 Olea europaea HOM05D002792 ORTHO05D003039 5.6e-35 151.0 134 61.2
COL.COLO4_37807 Corchorus olitorius HOM05D002792 ORTHO05D003039 2.4e-33 145.6 113 66.4
DCAR_020412 Daucus carota HOM05D002792 ORTHO05D003039 2.4e-33 145.6 134 60.4
Actinidia33796 Actinidia chinensis HOM05D002792 ORTHO05D003039 5.3e-33 144.4 134 59.0
ECA232G4649 Erigeron canadensis HOM05D002792 ORTHO05D003039 5.3e-33 144.4 130 59.2
TAR374G1562 Trochodendron aralioides HOM05D002792 ORTHO05D003039 5.3e-33 144.4 133 56.4
CSS0025331 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.0e-32 142.5 134 56.7
Hma1.2p1_0649F.1_g195300 Hydrangea macrophylla HOM05D002792 ORTHO05D003039 2.6e-32 142.1 134 58.2
vmacro22178 Vaccinium macrocarpon HOM05D002792 ORTHO05D003039 2.6e-32 142.1 134 58.2
Migut.F00091 Erythranthe guttata HOM05D002792 ORTHO05D003039 5.8e-32 141.0 135 60.7
Sc13g0010890 Simmondsia chinensis HOM05D002792 ORTHO05D003039 5.8e-32 141.0 134 59.7
CSS0023730 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 7.6e-32 140.6 133 56.4
Cc02_g00240 Coffea canephora HOM05D002792 ORTHO05D003039 1.3e-31 139.8 132 58.3
Eucgr.A02972 Eucalyptus grandis HOM05D002792 ORTHO05D003039 1.3e-31 139.8 133 60.2
Rhsim09G0213200 Rhododendron simsii HOM05D002792 ORTHO05D003039 1.3e-31 139.8 134 56.7
MELO3C021894.2 Cucumis melo HOM05D002792 ORTHO05D003039 1.7e-31 139.4 133 57.1
CsaV3_2G036370 Cucumis sativus L. HOM05D002792 ORTHO05D003039 1.7e-31 139.4 133 57.1
Lsat_1_v5_gn_9_47660 Lactuca sativa HOM05D002792 ORTHO05D003039 3.8e-31 138.3 137 57.7
CSS0013876 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 4.9e-31 137.9 134 54.5
MSTRG.8572 Avicennia marina HOM05D002792 ORTHO05D003039 8.4e-31 137.1 135 57.8
HanXRQChr05g0149531 Helianthus annuus HOM05D002792 ORTHO05D003039 1.4e-30 136.3 134 56.7
Hund09797 Selenicereus undatus HOM05D002792 ORTHO05D003039 1.4e-30 136.3 134 58.2
AUR62028182 Chenopodium quinoa HOM05D002792 ORTHO05D003039 1.9e-30 136.0 134 56.7
Nn6g31507 Nelumbo nucifera HOM05D002792 ORTHO05D003039 1.9e-30 136.0 115 60.9
QL09p023709 Quercus lobata HOM05D002792 ORTHO05D003039 1.9e-30 136.0 133 56.4
Duzib177G0842 Durio zibethinus HOM05D002792 ORTHO05D003039 2.5e-30 135.6 134 56.0
SGA_v2.0_scaffold18G08514 Striga asiatica HOM05D002792 ORTHO05D003039 3.2e-30 135.2 137 57.7
Thecc.05G214600 Theobroma cacao HOM05D002792 ORTHO05D003039 3.2e-30 135.2 134 56.0
ClCG09G016880 Citrullus lanatus HOM05D002792 ORTHO05D003039 4.2e-30 134.8 133 57.1
AUR62002069 Chenopodium quinoa HOM05D002792 ORTHO05D003039 5.5e-30 134.4 134 56.7
GSVIVG01024393001 Vitis vinifera HOM05D002792 ORTHO05D003039 5.5e-30 134.4 133 55.6
CiPaw.05G219100 Carya illinoinensis HOM05D002792 ORTHO05D003039 7.1e-30 134.0 133 56.4
Gohir.D03G051300 Gossypium hirsutum HOM05D002792 ORTHO05D003039 9.3e-30 133.7 134 58.2
Gorai.003G053000 Gossypium raimondii HOM05D002792 ORTHO05D003039 9.3e-30 133.7 134 58.2
Sed0014129 Sechium edule HOM05D002792 ORTHO05D003039 1.2e-29 133.3 133 56.4
TWI60G1442 Tripterygium wilfordii HOM05D002792 ORTHO05D003039 1.2e-29 133.3 129 59.7
Gohir.A02G140900 Gossypium hirsutum HOM05D002792 ORTHO05D003039 1.6e-29 132.9 134 59.0
Manes.09G126350 Manihot esculenta HOM05D002792 ORTHO05D003039 2.7e-29 132.1 133 54.9
PGR042G3456 Punica granatum HOM05D002792 ORTHO05D003039 2.7e-29 132.1 133 57.9
unitig_0.g2228 Utricularia gibba HOM05D002792 ORTHO05D003039 2.7e-29 132.1 134 54.5
Cpa.g.sc43.89 Carica papaya HOM05D002792 ORTHO05D003039 6.0e-29 131.0 133 57.1
EL10Ac3g05069 Beta vulgaris HOM05D002792 ORTHO05D003039 1.0e-28 130.2 152 50.7
Sed0016358 Sechium edule HOM05D002792 ORTHO05D003039 1.8e-28 129.4 134 55.2
Cfa016039 Carpinus fangiana HOM05D001491 ORTHO05D001443 2.3e-28 129.0 135 56.3
SGA_v2.0_scaffold44G16898 Striga asiatica HOM05D002792 ORTHO05D003039 8.7e-28 127.1 136 53.7
Potri.019G050100 Populus trichocarpa HOM05D002792 ORTHO05D003039 3.3e-27 125.2 138 55.1
Atru.chr5.3051 Acer truncatum HOM05D002792 ORTHO05D003039 7.4e-27 124.0 134 53.7
Ciclev10022485m.g Citrus clementina HOM05D002792 ORTHO05D003039 7.4e-27 124.0 134 53.0
Sabra19G0062200 Salix brachista HOM05D002792 ORTHO05D003039 7.4e-27 124.0 138 53.6
Ah.04g156650 Amaranthus hybridus HOM05D002792 ORTHO05D003039 6.3e-26 120.9 135 51.9
RcHm_v2.0_Chr1g0384301 Rosa chinensis HOM05D002792 ORTHO05D003039 6.3e-26 120.9 140 51.4
arahy.Tifrunner.gnm1.ann1.J3T3JB Arachis hypogaea HOM05D002792 ORTHO05D003039 8.2e-26 120.6 133 54.9
Glyma.11G098800 Glycine max HOM05D002792 ORTHO05D003039 1.1e-25 120.2 142 52.8
THA.LOC104827205 Tarenaya hassleriana HOM05D002792 ORTHO05D003039 1.1e-25 120.2 133 52.6
Aa31LG11G12720 Aethionema arabicum HOM05D002792 ORTHO05D003039 1.8e-25 119.4 133 54.1
arahy.Tifrunner.gnm1.ann1.277BC1 Arachis hypogaea HOM05D002792 ORTHO05D003039 1.8e-25 119.4 133 54.9
Prupe.2G326900 Prunus persica HOM05D002792 ORTHO05D003039 2.4e-25 119.0 139 51.1
Lalb_Chr01g0001391 Lupinus albus HOM05D002792 ORTHO05D003039 3.1e-25 118.6 136 50.7
FAN10G0495 Fragaria x ananassa HOM05D002792 ORTHO05D003039 6.9e-25 117.5 147 50.3
Glyma.12G024800 Glycine max HOM05D002792 ORTHO05D003039 6.9e-25 117.5 141 51.8
Psat7g177680 Pisum sativum HOM05D002792 ORTHO05D003039 1.5e-24 116.3 144 52.1
MD01G1012300 Malus domestica HOM05D002792 ORTHO05D003039 2.0e-24 115.9 144 47.9
PSO017G1368 Papaver somniferum HOM05D002792 ORTHO05D003039 2.0e-24 115.9 137 50.4
Phvul.011G027100 Phaseolus vulgaris HOM05D002792 ORTHO05D003039 2.0e-24 115.9 141 51.8
Sp6g27230 Schrenkiella parvula HOM05D002792 ORTHO05D003039 2.0e-24 115.9 113 58.4
MD15G1337800 Malus domestica HOM05D002792 ORTHO05D003039 4.5e-24 114.8 146 47.9
Medtr4g075280 Medicago truncatula HOM05D002792 ORTHO05D003039 1.0e-23 113.6 143 52.4
VMungo1127G0349 Vigna mungo HOM05D002792 ORTHO05D003039 1.3e-23 113.2 140 48.6
Ca_19007_v3 Cicer arietinum L. HOM05D002792 ORTHO05D003039 6.5e-23 110.9 146 47.3
Aqoxy6G03063 Aquilegia oxysepala HOM05D002792 ORTHO05D003039 1.1e-22 110.2 142 44.4
FvH4_7g34040 Fragaria vesca HOM05D002792 ORTHO05D003039 1.1e-22 110.2 150 45.3
Lj1A1033T72 Lonicera japonica HOM05D002792 ORTHO05D003039 1.1e-22 110.2 120 56.7
FAN03G1850 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.4e-22 109.8 146 45.9
BraA10t44295Z Brassica rapa HOM05D002792 ORTHO05D003039 3.2e-22 108.6 133 49.6
CDE06G0491 Ceratophyllum demersum HOM05D002792 ORTHO05D003039 3.2e-22 108.6 135 46.7
C09p60210 Brassica napus HOM05D002792 ORTHO05D003039 7.2e-22 107.5 134 50.7
BolC9t58854H Brassica oleracea HOM05D002792 ORTHO05D003039 7.2e-22 107.5 134 50.7
A10p22360 Brassica napus HOM05D002792 ORTHO05D003039 9.3e-22 107.1 133 48.9
Thhalv10021622m.g Eutrema salsugineum HOM05D002792 ORTHO05D003039 2.1e-21 105.9 134 48.5
Thhalv10014859m.g Eutrema salsugineum HOM05D002792 ORTHO05D003039 2.7e-21 105.5 133 49.6
Carub.0006s1509 Capsella rubella HOM05D002792 ORTHO05D003039 4.6e-21 104.8 133 50.4
Mapoly0028s0079 Marchantia polymorpha HOM05D002792 ORTHO05D003039 4.6e-21 104.8 128 49.2
CDE04G3025 Ceratophyllum demersum HOM05D002792 ORTHO05D003039 7.9e-21 104.0 135 45.9
CARHR196290 Cardamine hirsuta HOM05D002792 ORTHO05D003039 1.0e-20 103.6 133 51.9
FAN01G1884 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.3e-20 103.2 150 43.3
AT5G16870 Arabidopsis thaliana HOM05D002792 ORTHO05D003039 1.8e-20 102.8 133 48.9
AT3G03010 Arabidopsis thaliana HOM05D002792 ORTHO05D003039 3.9e-20 101.7 134 47.0
CARHR077030 Cardamine hirsuta HOM05D002792 ORTHO05D003039 3.9e-20 101.7 134 48.5
AL3G12520 Arabidopsis lyrata HOM05D002792 ORTHO05D003039 6.7e-20 100.9 134 47.0
AL6G27880 Arabidopsis lyrata HOM05D002792 ORTHO05D003039 1.1e-19 100.1 134 49.3
BcaC04g18838 Brassica carinata HOM05D002792 ORTHO05D003039 1.5e-19 99.8 133 48.9
Carub.0003s0216 Capsella rubella HOM05D002792 ORTHO05D003039 2.5e-19 99.0 135 46.7
Lj3g0025659 Lotus japonicus HOM05D002792 ORTHO05D003039 2.5e-19 99.0 150 46.0
Sp3g02070 Schrenkiella parvula HOM05D002792 ORTHO05D003039 2.5e-19 99.0 134 45.5
Os04g0652900 Oryza sativa ssp. japonica HOM05D002792 ORTHO05D003039 4.3e-19 98.2 86 64.0
Zm00001eb432350 Zea mays HOM05D002792 ORTHO05D003039 7.4e-19 97.4 86 61.6
BcaB04g21389 Brassica carinata HOM05D002792 ORTHO05D003039 1.3e-18 96.7 134 46.3
AagrBONN_evm.TU.Sc2ySwM_228.5649 Anthoceros agrestis HOM05D002792 ORTHO05D003039 2.8e-18 95.5 134 44.8
HPP92_005798 Vanilla planifolia HOM05D002792 ORTHO05D003039 2.8e-18 95.5 88 62.5
TPR.G8450 Trifolium pratense HOM05D002792 ORTHO05D003039 6.3e-18 94.4 104 51.9
HPP92_005789 Vanilla planifolia HOM05D002792 ORTHO05D003039 6.3e-18 94.4 88 61.4
Pp3c9_26160 Physcomitrium patens HOM05D002792 ORTHO05D003039 4.1e-17 91.7 133 45.1
BolC1t05854H Brassica oleracea HOM05D002792 ORTHO05D003039 6.9e-17 90.9 134 46.3
BraA01t04599Z Brassica rapa HOM05D002792 ORTHO05D003039 9.0e-17 90.5 134 45.5
BNapus_Darmor_BZH_scaffold_129p00080 Brassica napus HOM05D002792 ORTHO05D003039 1.5e-16 89.7 134 45.5
Pp3c6_4050 Physcomitrium patens HOM05D002792 ORTHO05D003039 1.5e-16 89.7 131 43.5
Aa31LG5G13500 Aethionema arabicum HOM05D002792 ORTHO05D003039 2.6e-16 89.0 161 41.0
A03p08050 Brassica napus HOM05D002792 ORTHO05D003039 1.9e-14 82.8 90 53.3
BraA03t10130Z Brassica rapa HOM05D002792 ORTHO05D003039 1.9e-14 82.8 90 53.3
SHI02582 Sapria himalayana HOM05D002792 ORTHO05D003039 1.9e-14 82.8 133 42.9
SMO358G0685 Selaginella moellendorffii HOM05D002792 ORTHO05D003039 2.1e-13 79.3 85 56.5
Hma1.2p1_0021F.1_g014450 Hydrangea macrophylla HOM05D002792 ORTHO05D003039 8.8e-12 73.9 64 60.9
CBR_g33941 Chara braunii HOM05D002792 ORTHO05D003039 1.1e-09 67.0 152 34.2
HanXRQChr16g0509381 Helianthus annuus HOM05D002792 ORTHO05D003039 1.8e-09 66.2 114 36.8
Carub.0003s0310 Capsella rubella HOM05D002792 ORTHO05D003039 4.5e-08 61.6 135 37.8
Pp3c6_14950 Physcomitrium patens HOM05D002792 ORTHO05D003039 3.8e-07 58.5 82 41.5
ECA246G3749 Erigeron canadensis HOM05D002792 ORTHO05D003039 6.5e-07 57.8 67 46.3
EL10Ac2g04008 Beta vulgaris HOM05D002792 ORTHO05D003039 8.5e-07 57.4 68 44.1
Actinidia30279 Actinidia chinensis HOM05D002792 ORTHO05D003039 1.4e-06 56.6 116 35.3
CAN.G400.15 Capsicum annuum HOM05D002792 ORTHO05D003039 1.9e-06 56.2 115 31.3
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 1.9e-06 56.2 114 32.5
Sopen08g020380 Solanum pennellii HOM05D002792 ORTHO05D003039 1.9e-06 56.2 115 33.9
vmacro11056 Vaccinium macrocarpon HOM05D002792 ORTHO05D003039 1.9e-06 56.2 119 34.5
Dinv27907 Davidia involucrata HOM05D002792 ORTHO05D003039 2.5e-06 55.8 64 45.3
Solyc08g066540.3 Solanum lycopersicum HOM05D002792 ORTHO05D003039 2.5e-06 55.8 115 33.9
MBI13_g05965_MAGBIO Magnolia biondii HOM05D002792 ORTHO05D003039 3.2e-06 55.5 54 55.6
Ciclev10009570m.g Citrus clementina HOM05D002792 ORTHO05D003039 4.2e-06 55.1 77 39.0
Oeu043885.1 Olea europaea HOM05D002792 ORTHO05D003039 4.2e-06 55.1 64 43.8
PGSC0003DMG400002231 Solanum tuberosum HOM05D002792 ORTHO05D003039 4.2e-06 55.1 115 33.0
Migut.E01530 Erythranthe guttata HOM05D002792 ORTHO05D003039 5.5e-06 54.7 64 42.2
SalBow1G0964 Salvia bowleyana HOM05D002792 ORTHO05D003039 5.5e-06 54.7 64 43.8
CSS0012947 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 7.2e-06 54.3 64 43.8
GSVIVG01035616001 Vitis vinifera HOM05D002792 ORTHO05D003039 7.2e-06 54.3 64 43.8
Cc08_g09690 Coffea canephora HOM05D002792 ORTHO05D003039 9.4e-06 53.9 64 43.8
Sed0001182 Sechium edule HOM05D002792 ORTHO05D003039 9.4e-06 53.9 88 36.4


User provided reference genes

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