Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001342g0020 Nicotiana tabacum HOM05D003253 ORTHO05D002078 6.4e-199 697.2 348 100.0
Nitab4.5_0001920g0020 Nicotiana tabacum HOM05D003253 ORTHO05D002078 2.8e-186 655.2 347 95.4
Peaxi162Scf00092g00617 Petunia axillaris HOM05D003253 ORTHO05D002078 1.9e-158 562.8 364 79.7
PGSC0003DMG400032262 Solanum tuberosum HOM05D003253 ORTHO05D002078 3.3e-155 552.0 351 81.2
Sopen09g031020 Solanum pennellii HOM05D003253 ORTHO05D002078 6.9e-153 544.3 351 79.5
Solyc09g082140.4 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.8e-151 538.5 351 78.3
CAN.G1094.7 Capsicum annuum HOM05D003253 ORTHO05D002078 6.7e-140 501.1 391 69.3
Oeu049061.1 Olea europaea HOM05D003253 ORTHO05D002078 1.4e-113 413.7 347 63.7
Actinidia25640 Actinidia chinensis HOM05D003253 ORTHO05D002078 6.1e-109 398.3 340 60.9
Actinidia35276 Actinidia chinensis HOM05D003253 ORTHO05D002078 6.1e-109 398.3 340 60.9
Lj6C607G12 Lonicera japonica HOM05D003253 ORTHO05D002078 3.4e-107 392.5 344 57.3
CSS0040917 Camellia sinensis var. sinensis HOM05D003253 ORTHO05D002078 3.7e-106 389.0 344 59.9
RhsimUnG0259000 Rhododendron simsii HOM05D003253 ORTHO05D002078 3.7e-106 389.0 345 61.7
QL06p002114 Quercus lobata HOM05D003253 ORTHO05D002078 7.8e-104 381.3 346 57.2
Cc03_g03900 Coffea canephora HOM05D003253 ORTHO05D002078 1.9e-102 376.7 343 58.6
CiPaw.01G167300 Carya illinoinensis HOM05D003253 ORTHO05D002078 1.2e-101 374.0 346 57.2
Manes.03G177500 Manihot esculenta HOM05D003253 ORTHO05D002078 2.8e-101 372.9 345 56.8
Actinidia25641 Actinidia chinensis HOM05D003253 ORTHO05D002078 3.6e-101 372.5 347 56.8
Actinidia35275 Actinidia chinensis HOM05D003253 ORTHO05D002078 3.6e-101 372.5 347 56.8
Cfa015661 Carpinus fangiana HOM05D003253 ORTHO05D002078 1.8e-100 370.2 350 57.4
Haze_00887 Corylus avellana HOM05D003253 ORTHO05D002078 1.8e-100 370.2 350 56.9
vmacro09557 Vaccinium macrocarpon HOM05D003253 ORTHO05D002078 2.3e-100 369.8 342 58.2
TAR633G1510 Trochodendron aralioides HOM05D003253 ORTHO05D002078 5.8e-99 365.2 365 54.0
Prupe.1G015300 Prunus persica HOM05D003253 ORTHO05D002078 1.3e-98 364.0 344 56.7
CiPaw.02G097800 Carya illinoinensis HOM05D003253 ORTHO05D002078 4.9e-98 362.1 345 55.4
Sabra10G0056900 Salix brachista HOM05D003253 ORTHO05D002078 1.1e-97 360.9 376 51.3
Hma1.2p1_0602F.1_g187400 Hydrangea macrophylla HOM05D003253 ORTHO05D002078 1.2e-96 357.5 347 55.0
Duzib052G0544 Durio zibethinus HOM05D003253 ORTHO05D002078 3.5e-96 355.9 345 55.7
FAN22G0721 Fragaria x ananassa HOM05D003253 ORTHO05D002078 1.0e-95 354.4 344 54.9
FAN12G2226 Fragaria x ananassa HOM05D003253 ORTHO05D002078 1.7e-95 353.6 344 54.4
FvH4_4g16310 Fragaria vesca HOM05D003253 ORTHO05D002078 2.3e-95 353.2 344 54.4
Migut.N00190 Erythranthe guttata HOM05D003253 ORTHO05D002078 3.0e-95 352.8 340 57.1
MD13G1194400 Malus domestica HOM05D003253 ORTHO05D002078 3.9e-95 352.4 349 54.2
Thecc.04G233500 Theobroma cacao HOM05D003253 ORTHO05D002078 3.9e-95 352.4 337 57.0
vmacro09558 Vaccinium macrocarpon HOM05D003253 ORTHO05D002078 8.6e-95 351.3 343 57.4
RcHm_v2.0_Chr4g0416001 Rosa chinensis HOM05D003253 ORTHO05D002078 1.1e-94 350.9 352 54.3
SalBow3G1993 Salvia bowleyana HOM05D003253 ORTHO05D002078 1.9e-94 350.1 350 56.6
FAN07G1764 Fragaria x ananassa HOM05D003253 ORTHO05D002078 4.3e-94 349.0 344 53.5
DCAR_002383 Daucus carota HOM05D003253 ORTHO05D002078 3.6e-93 345.9 340 53.2
MSTRG.24737 Avicennia marina HOM05D003253 ORTHO05D002078 4.7e-93 345.5 344 54.9
Dinv14001 Davidia involucrata HOM05D003253 ORTHO05D002078 1.4e-92 344.0 292 59.6
CANSAT78G2304 Cannabis sativa HOM05D003253 ORTHO05D002078 4.0e-92 342.4 344 52.3
Cpa.g.sc1512.1 Carica papaya HOM05D003253 ORTHO05D002078 1.2e-91 340.9 342 52.0
Gohir.A09G056601 Gossypium hirsutum HOM05D003253 ORTHO05D002078 1.2e-91 340.9 339 54.6
COL.COLO4_21490 Corchorus olitorius HOM05D003253 ORTHO05D002078 2.0e-91 340.1 365 53.2
Gohir.D09G055900 Gossypium hirsutum HOM05D003253 ORTHO05D002078 2.0e-91 340.1 339 54.6
Sed0019594 Sechium edule HOM05D003253 ORTHO05D002078 2.0e-91 340.1 353 53.0
Nn1g02344 Nelumbo nucifera HOM05D003253 ORTHO05D002078 2.6e-91 339.7 364 51.1
ClCG05G005130 Citrullus lanatus HOM05D003253 ORTHO05D002078 9.8e-91 337.8 344 55.2
Gorai.006G069200 Gossypium raimondii HOM05D003253 ORTHO05D002078 1.9e-89 333.6 369 50.7
TWI53G2057 Tripterygium wilfordii HOM05D003253 ORTHO05D002078 3.2e-89 332.8 338 51.2
Sed0023955 Sechium edule HOM05D003253 ORTHO05D002078 7.1e-89 331.6 344 54.1
GSVIVG01017993001 Vitis vinifera HOM05D003253 ORTHO05D002078 9.2e-89 331.3 350 52.6
CsaV3_3G013260 Cucumis sativus L. HOM05D003253 ORTHO05D002078 1.2e-88 330.9 336 53.6
Ciclev10004835m.g Citrus clementina HOM05D003253 ORTHO05D002078 7.8e-88 328.2 346 50.9
MBI12_g36454_MAGBIO Magnolia biondii HOM05D003253 ORTHO05D002078 5.1e-87 325.5 357 48.5
arahy.Tifrunner.gnm1.ann1.2A778E Arachis hypogaea HOM05D003253 ORTHO05D002078 1.1e-84 317.8 347 51.6
MELO3C006528.2 Cucumis melo HOM05D003253 ORTHO05D002078 1.1e-84 317.8 336 53.0
AL1G15260 Arabidopsis lyrata HOM05D003253 ORTHO05D002078 1.8e-84 317.0 351 47.9
Eucgr.H03453 Eucalyptus grandis HOM05D003253 ORTHO05D002078 5.2e-84 315.5 347 49.0
Aqoxy5G00455 Aquilegia oxysepala HOM05D003253 ORTHO05D002078 2.6e-83 313.2 354 48.6
THA.LOC104800959 Tarenaya hassleriana HOM05D003253 ORTHO05D002078 3.4e-83 312.8 336 48.8
Lalb_Chr09g0319891 Lupinus albus HOM05D003253 ORTHO05D002078 7.6e-83 311.6 346 52.3
TWI09G0550 Tripterygium wilfordii HOM05D003253 ORTHO05D002078 7.6e-83 311.6 333 49.8
A10p04120 Brassica napus HOM05D003253 ORTHO05D002078 1.7e-82 310.5 340 47.6
Sc19g0004070 Simmondsia chinensis HOM05D003253 ORTHO05D002078 1.7e-82 310.5 336 48.8
arahy.Tifrunner.gnm1.ann1.ETQ115 Arachis hypogaea HOM05D003253 ORTHO05D002078 2.2e-82 310.1 344 50.0
BcaB02g06862 Brassica carinata HOM05D003253 ORTHO05D002078 6.4e-82 308.5 340 47.1
Sp1g04290 Schrenkiella parvula HOM05D003253 ORTHO05D002078 8.4e-82 308.1 336 48.2
AT1G05410 Arabidopsis thaliana HOM05D003253 ORTHO05D002078 1.4e-81 307.4 351 46.7
Thhalv10007544m.g Eutrema salsugineum HOM05D003253 ORTHO05D002078 2.4e-81 306.6 345 47.5
DCAR_027222 Daucus carota HOM05D003253 ORTHO05D002078 3.2e-81 306.2 349 47.6
Psat6g188240 Pisum sativum HOM05D003253 ORTHO05D002078 7.1e-81 305.1 345 46.4
ECA240G1510 Erigeron canadensis HOM05D003253 ORTHO05D002078 1.6e-80 303.9 345 47.2
C05p03760 Brassica napus HOM05D003253 ORTHO05D002078 7.8e-80 301.6 335 47.8
BolC5t29153H Brassica oleracea HOM05D003253 ORTHO05D002078 7.8e-80 301.6 335 47.8
Ca_24401_v3 Cicer arietinum L. HOM05D003253 ORTHO05D002078 1.3e-79 300.8 339 51.0
Aa31LG1G19210 Aethionema arabicum HOM05D003253 ORTHO05D002078 1.7e-79 300.4 354 45.5
PGR004G0591 Punica granatum HOM05D003253 ORTHO05D002078 5.1e-79 298.9 348 47.4
BraA10t42682Z Brassica rapa HOM05D003253 ORTHO05D002078 5.6e-78 295.4 340 46.2
PGR004G0723 Punica granatum HOM05D003253 ORTHO05D002078 7.3e-78 295.0 355 46.2
Carub.0001s0475 Capsella rubella HOM05D003253 ORTHO05D002078 2.1e-77 293.5 336 47.3
Glyma.01G237400 Glycine max HOM05D003253 ORTHO05D002078 2.8e-77 293.1 335 47.8
Lalb_Chr25g0279741 Lupinus albus HOM05D003253 ORTHO05D002078 2.8e-77 293.1 341 48.1
Glyma.18G119500 Glycine max HOM05D003253 ORTHO05D002078 6.2e-77 292.0 339 47.8
Eucgr.H03454 Eucalyptus grandis HOM05D003253 ORTHO05D002078 1.1e-76 291.2 344 48.3
Psat0s3046g0120 Pisum sativum HOM05D003253 ORTHO05D002078 3.1e-76 289.7 347 45.0
Glyma.11G006000 Glycine max HOM05D003253 ORTHO05D002078 7.6e-75 285.0 335 47.5
Peaxi162Scf00192g00112 Petunia axillaris HOM05D003253 ORTHO05D002078 9.9e-75 284.6 166 79.5
BcaC05g24390 Brassica carinata HOM05D003253 ORTHO05D002078 1.3e-74 284.3 316 47.2
Lalb_Chr05g0211011 Lupinus albus HOM05D003253 ORTHO05D002078 1.3e-74 284.3 343 48.1
Lsat_1_v5_gn_7_64380 Lactuca sativa HOM05D003253 ORTHO05D002078 1.7e-74 283.9 351 45.6
Psat6g206800 Pisum sativum HOM05D003253 ORTHO05D002078 1.7e-74 283.9 347 44.4
Aqoxy2G03403 Aquilegia oxysepala HOM05D003253 ORTHO05D002078 2.9e-74 283.1 346 44.8
Nitab4.5_0000321g0110 Nicotiana tabacum HOM05D003253 ORTHO05D002078 2.9e-74 283.1 166 80.7
TPR.G5553 Trifolium pratense HOM05D003253 ORTHO05D002078 2.9e-74 283.1 336 47.3
HanXRQChr09g0248261 Helianthus annuus HOM05D003253 ORTHO05D002078 3.8e-74 282.7 347 46.4
Nitab4.5_0008118g0010 Nicotiana tabacum HOM05D003253 ORTHO05D002078 3.8e-74 282.7 166 79.5
AUR62025569 Chenopodium quinoa HOM05D003253 ORTHO05D002078 4.9e-74 282.3 337 45.4
PSO761G0482 Papaver somniferum HOM05D003253 ORTHO05D002078 6.4e-74 282.0 341 46.3
VMungo1215G2555 Vigna mungo HOM05D003253 ORTHO05D002078 9.3e-73 278.1 335 47.5
AUR62008677 Chenopodium quinoa HOM05D003253 ORTHO05D002078 1.6e-72 277.3 352 43.8
PSO832G3307 Papaver somniferum HOM05D003253 ORTHO05D002078 1.3e-71 274.2 362 42.5
PGR004G2151 Punica granatum HOM05D003253 ORTHO05D002078 3.0e-71 273.1 343 45.5
CARHR004920 Cardamine hirsuta HOM05D003253 ORTHO05D002078 1.1e-70 271.2 336 44.0
PSO210G1140 Papaver somniferum HOM05D003253 ORTHO05D002078 1.9e-70 270.4 359 43.5
Phvul.002G045300 Phaseolus vulgaris HOM05D003253 ORTHO05D002078 2.5e-70 270.0 338 46.2
Hund12120 Selenicereus undatus HOM05D003253 ORTHO05D002078 4.3e-70 269.2 345 44.6
TWI73G0819 Tripterygium wilfordii HOM05D003253 ORTHO05D002078 4.3e-70 269.2 273 51.6
Ca_10889_v3 Cicer arietinum L. HOM05D003253 ORTHO05D002078 7.3e-70 268.5 333 45.0
Ca_30336_v3 Cicer arietinum L. HOM05D003253 ORTHO05D002078 7.3e-70 268.5 333 45.0
Psat4g210160 Pisum sativum HOM05D003253 ORTHO05D002078 7.3e-70 268.5 340 48.2
Os03g0747200 Oryza sativa ssp. japonica HOM05D003253 ORTHO05D002078 4.8e-69 265.8 365 41.1
DCAR_030641 Daucus carota HOM05D003253 ORTHO05D002078 1.1e-68 264.6 336 46.7
Medtr5g006390 Medicago truncatula HOM05D003253 ORTHO05D002078 3.1e-68 263.1 341 44.3
LjContig00408g0013219 Lotus japonicus HOM05D003253 ORTHO05D002078 6.9e-68 261.9 345 43.8
Medtr1g103600 Medicago truncatula HOM05D003253 ORTHO05D002078 6.9e-68 261.9 327 44.0
PGSC0003DMG400023100 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.5e-67 260.8 200 64.0
Zm00001eb057100 Zea mays HOM05D003253 ORTHO05D002078 4.4e-67 259.2 365 40.5
BcaC05g24391 Brassica carinata HOM05D003253 ORTHO05D002078 7.6e-67 258.5 342 43.9
Dinv44542 Davidia involucrata HOM05D003253 ORTHO05D002078 2.9e-66 256.5 167 69.5
PSO210G5071 Papaver somniferum HOM05D003253 ORTHO05D002078 2.4e-65 253.4 342 42.7
CSS0030672 Camellia sinensis var. sinensis HOM05D003253 ORTHO05D002078 4.2e-65 252.7 198 63.1
PGSC0003DMG400006740 Solanum tuberosum HOM05D003253 ORTHO05D002078 9.3e-65 251.5 166 71.7
TPR.G37995 Trifolium pratense HOM05D003253 ORTHO05D002078 2.7e-64 250.0 346 45.4
Solyc06g054200.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.9e-63 246.1 196 63.3
Lj5g0003807 Lotus japonicus HOM05D003253 ORTHO05D002078 5.1e-63 245.7 339 43.4
PGSC0003DMG400030174 Solanum tuberosum HOM05D003253 ORTHO05D002078 8.7e-63 245.0 166 69.3
Solyc06g054230.4 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.3e-62 243.0 186 65.1
CAN.G231.2 Capsicum annuum HOM05D003253 ORTHO05D002078 5.6e-62 242.3 166 68.7
Sopen06g019350 Solanum pennellii HOM05D003253 ORTHO05D002078 3.6e-61 239.6 166 69.3
PGR004G2032 Punica granatum HOM05D003253 ORTHO05D002078 1.4e-60 237.7 271 48.7
Sopen06g019340 Solanum pennellii HOM05D003253 ORTHO05D002078 1.2e-59 234.6 194 61.9
Potri.010G086600 Populus trichocarpa HOM05D003253 ORTHO05D002078 5.8e-59 232.3 168 64.9
Solyc06g054160.2 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.7e-58 230.7 194 60.8
Sopen09g024540 Solanum pennellii HOM05D003253 ORTHO05D002078 2.9e-58 229.9 166 68.1
Solyc06g054180.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 8.4e-58 228.4 189 61.9
ATR0697G249 Amborella trichopoda HOM05D003253 ORTHO05D002078 1.9e-57 227.3 338 40.8
Phvul.002G044800 Phaseolus vulgaris HOM05D003253 ORTHO05D002078 2.1e-56 223.8 333 39.9
Solyc09g061260.2 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.0e-55 219.9 175 62.9
Solyc09g061370.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 8.7e-55 218.4 166 66.3
Sopen09g023100 Solanum pennellii HOM05D003253 ORTHO05D002078 3.3e-54 216.5 150 70.7
BcaB05g24280 Brassica carinata HOM05D003253 ORTHO05D002078 5.6e-54 215.7 266 44.0
PGSC0003DMG400041970 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.6e-53 214.2 166 63.9
Cc06_g18330 Coffea canephora HOM05D003253 ORTHO05D002078 2.1e-53 213.8 141 70.2
PGSC0003DMG400016262 Solanum tuberosum HOM05D003253 ORTHO05D002078 4.0e-52 209.5 145 70.3
Sopen09g024360 Solanum pennellii HOM05D003253 ORTHO05D002078 4.9e-50 202.6 159 62.9
CARHR054160 Cardamine hirsuta HOM05D003253 ORTHO05D002078 5.5e-49 199.1 161 57.1
SGA_v2.0_scaffold522G52706 Striga asiatica HOM05D003253 ORTHO05D002078 2.7e-48 196.8 163 58.3
HPP92_009611 Vanilla planifolia HOM05D003253 ORTHO05D002078 1.0e-47 194.9 312 38.8
BcaB05g24279 Brassica carinata HOM05D003253 ORTHO05D002078 6.7e-47 192.2 254 42.5
DCAR_027224 Daucus carota HOM05D003253 ORTHO05D002078 8.7e-47 191.8 255 45.1
DCAR_027225 Daucus carota HOM05D003253 ORTHO05D002078 9.6e-46 188.3 289 40.8
Solyc09g059910.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 4.8e-45 186.0 143 62.2
Solyc09g059740.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.3e-39 167.2 124 66.1
PGSC0003DMG400030176 Solanum tuberosum HOM05D003253 ORTHO05D002078 2.9e-34 150.2 168 48.2
PGSC0003DMG400030175 Solanum tuberosum HOM05D003253 ORTHO05D002078 5.5e-33 146.0 129 56.6
Cpa.g.sc58.96 Carica papaya HOM05D003253 ORTHO05D002078 4.6e-32 142.9 249 38.2
DCAR_027223 Daucus carota HOM05D003253 ORTHO05D002078 1.0e-31 141.7 206 41.3
SEGI_30321 Sequoiadendron giganteum HOM05D003253 ORTHO05D002078 3.3e-30 136.7 182 38.5
Solyc09g059890.2 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.3e-30 136.7 110 60.9
Solyc09g061580.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 9.7e-30 135.2 105 61.9
Solyc09g061590.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 6.3e-29 132.5 121 57.0
Atru.chr4.2451 Acer truncatum HOM05D003253 ORTHO05D002078 1.1e-28 131.7 135 51.9
Solyc09g061540.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 9.1e-28 128.6 105 61.9
Solyc09g061500.2 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.0e-27 127.5 125 54.4
SEGI_19972 Sequoiadendron giganteum HOM05D003253 ORTHO05D002078 1.8e-23 114.4 123 44.7
AagrBONN_evm.TU.Sc2ySwM_344.1597 Anthoceros agrestis HOM05D003253 ORTHO05D002078 3.3e-22 110.2 180 37.8
Pp3c9_22000 Physcomitrium patens HOM05D003253 ORTHO05D002078 3.3e-22 110.2 142 39.4
Pp3c9_22005 Physcomitrium patens HOM05D003253 ORTHO05D002078 3.3e-22 110.2 142 39.4
Pp3c15_9060 Physcomitrium patens HOM05D003253 ORTHO05D002078 2.2e-21 107.5 165 37.6
BcaC05g24388 Brassica carinata HOM05D003253 ORTHO05D002078 2.6e-19 100.5 109 48.6
Solyc09g060020.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.9e-18 97.1 73 60.3
TPR.G5474 Trifolium pratense HOM05D003253 ORTHO05D002078 7.2e-17 92.4 109 45.9
Solyc09g059870.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.8e-15 87.8 131 39.7
Solyc09g061600.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 4.0e-15 86.7 78 59.0
TPR.G37906 Trifolium pratense HOM05D003253 ORTHO05D002664 2.6e-14 84.0 133 39.1
Solyc09g060060.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 5.3e-12 76.3 60 66.7
CARHR054150 Cardamine hirsuta HOM05D003253 ORTHO05D002078 1.5e-09 68.2 101 38.6
CBR_g48542 Chara braunii HOM05D003253 ORTHO05D002078 3.2e-09 67.0 172 29.7
Solyc09g059900.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.2e-09 67.0 54 61.1
Solyc09g060010.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.2e-08 65.1 50 62.0
C09p04640 Brassica napus HOM05D000222 ORTHO05D003997 3.0e-07 60.5 154 28.6
BcaC04g23791 Brassica carinata HOM05D000222 ORTHO05D003997 5.2e-07 59.7 154 28.6
CSS0029369 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D003997 4.4e-06 56.6 147 27.2
MBI04_g34431_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D007489 4.4e-06 56.6 170 25.3


User provided reference genes

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