Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.7e-140 502.7 258 100.0
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 5.2e-105 384.8 246 81.3
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 6.8e-105 384.4 246 81.3
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.0e-104 382.9 248 81.0
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 2.5e-99 365.9 251 77.3
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.4e-97 360.1 198 93.9
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.7e-71 273.5 244 58.6
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 2.1e-58 229.9 245 53.9
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 9.0e-57 224.6 174 66.7
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.5e-56 223.8 250 52.0
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 4.5e-56 222.2 184 63.6
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 3.8e-47 192.6 234 44.0
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.4e-46 190.7 235 43.8
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 3.0e-44 183.0 235 44.7
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.1e-43 181.0 219 45.2
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 7.4e-43 178.3 223 43.9
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 6.9e-41 171.8 229 41.5
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 2.6e-40 169.9 230 41.7
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 4.5e-40 169.1 234 41.0
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.3e-39 167.5 221 41.6
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 3.8e-39 166.0 234 40.6
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 8.5e-39 164.9 245 39.2
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 9.4e-38 161.4 261 36.4
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 1.2e-37 161.0 261 36.4
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 1.2e-37 161.0 249 40.6
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 1.8e-36 157.1 263 35.7
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 2.3e-36 156.8 249 36.5
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 3.9e-36 156.0 248 37.5
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 3.3e-35 152.9 244 38.1
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 9.7e-35 151.4 234 38.0
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 1.3e-34 151.0 226 38.9
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.2e-34 150.2 254 34.3
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 8.2e-34 148.3 228 38.6
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 1.1e-33 147.9 216 39.8
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.1e-33 147.9 103 70.9
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.8e-33 147.1 230 38.3
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 2.4e-33 146.7 244 36.5
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 2.4e-33 146.7 262 35.1
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 4.1e-33 146.0 253 34.0
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 6.9e-33 145.2 234 38.0
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 6.9e-33 145.2 243 37.9
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 9.1e-33 144.8 254 33.9
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 9.1e-33 144.8 236 35.6
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 2.6e-32 143.3 254 33.9
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.6e-32 143.3 254 33.9
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 3.4e-32 142.9 244 34.8
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 3.4e-32 142.9 240 34.6
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 5.9e-32 142.1 234 35.9
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 1.0e-31 141.4 255 34.1
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.3e-31 141.0 210 40.5
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.3e-31 141.0 245 35.1
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 1.7e-31 140.6 248 37.1
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.7e-31 140.6 249 37.8
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 1.7e-31 140.6 161 45.3
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 1.7e-31 140.6 232 37.5
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 5.0e-31 139.0 246 35.8
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 5.0e-31 139.0 256 33.2
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 9.4e-30 134.8 269 32.7
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.2e-29 134.4 244 35.7
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 1.6e-29 134.0 237 35.9
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.6e-29 132.9 233 34.8
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 3.6e-29 132.9 239 34.3
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 4.7e-29 132.5 245 36.3
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 7.9e-29 131.7 249 35.3
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.8e-28 130.6 224 37.1
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 2.3e-28 130.2 244 36.5
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 3.0e-28 129.8 258 34.1
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 5.1e-28 129.0 238 34.9
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 5.1e-28 129.0 249 33.3
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 6.7e-28 128.6 279 31.5
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 1.1e-27 127.9 232 36.2
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 2.6e-27 126.7 238 35.3
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.8e-25 120.6 215 34.4
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 4.1e-25 119.4 229 34.5
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 1.0e-23 114.8 160 41.9
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 5.0e-23 112.5 244 30.3
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 2.5e-22 110.2 237 34.2
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 7.2e-22 108.6 238 31.5
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 9.4e-22 108.2 249 32.5
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 8.8e-20 101.7 146 39.7
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.5e-19 100.9 189 33.9
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 4.4e-19 99.4 250 29.6
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 3.7e-18 96.3 109 44.0
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 4.8e-18 95.9 163 32.5
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 5.9e-16 89.0 164 35.4
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 4.0e-12 76.3 231 29.9
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 6.8e-12 75.5 237 27.0
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.2e-11 74.7 184 30.4
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 2.6e-11 73.6 169 33.7
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 4.4e-11 72.8 252 27.4
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 5.7e-11 72.4 170 33.5
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 7.5e-11 72.0 237 31.6
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 7.5e-11 72.0 222 28.8
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 1.4e-09 67.8 221 30.3
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 1.4e-09 67.8 239 27.2
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 4.1e-09 66.2 249 28.9
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 7.0e-09 65.5 175 30.3
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 7.0e-09 65.5 175 30.3
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 1.6e-08 64.3 178 30.3
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 1.6e-08 64.3 144 32.6
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 3.5e-08 63.2 231 28.1
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 1.3e-07 61.2 175 29.1
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 1.7e-07 60.8 240 26.7
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 1.7e-07 60.8 87 40.2
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 2.2e-07 60.5 174 28.2
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 2.2e-07 60.5 174 28.2


User provided reference genes

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