Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001341g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.0e-31 139.4 70 100.0
Nitab4.5_0003450g0060 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.6e-16 89.0 68 64.7
Nitab4.5_0000054g0270 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.4e-15 85.9 53 73.6
Nitab4.5_0000030g0550 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.8e-15 85.5 52 76.9
Nitab4.5_0000121g0190 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.3e-15 85.1 52 76.9
Nitab4.5_0006021g0010 Nicotiana tabacum HOM05D001454 ORTHO05D000007 5.2e-15 84.0 52 78.8
Nitab4.5_0005686g0070 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.7e-15 83.6 57 71.9
Nitab4.5_0000151g0040 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.1e-14 82.8 52 78.8
Nitab4.5_0000545g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.5e-14 82.4 52 71.2
Nitab4.5_0000149g0160 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.0e-14 82.0 52 76.9
Nitab4.5_0002090g0050 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.0e-14 82.0 52 73.1
Nitab4.5_0009932g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.0e-14 82.0 52 76.9
Nitab4.5_0011222g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.6e-14 81.6 52 76.9
Nitab4.5_0000657g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.3e-14 81.3 51 76.5
Nitab4.5_0003764g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 4.4e-14 80.9 52 76.9
Nitab4.5_0000380g0110 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.7e-14 80.5 52 76.9
Nitab4.5_0000008g0100 Nicotiana tabacum HOM05D000801 ORTHO05D000007 7.4e-14 80.1 51 72.5
Nitab4.5_0001345g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 7.4e-14 80.1 52 75.0
Nitab4.5_0000094g0180 Nicotiana tabacum HOM05D001454 ORTHO05D000007 9.7e-14 79.7 51 70.6
Nitab4.5_0001314g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 9.7e-14 79.7 53 75.5
Nitab4.5_0000002g0260 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.7e-13 77.8 52 71.2
Nitab4.5_0000029g0070 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.7e-13 77.8 50 72.0
Nitab4.5_0001397g0070 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.7e-13 77.8 52 75.0
Nitab4.5_0000111g0190 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.3e-13 77.0 53 67.9
Nitab4.5_0000218g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.3e-13 77.0 52 73.1
Nitab4.5_0001322g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.3e-13 77.0 50 70.0
Nitab4.5_0000067g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.2e-13 76.6 80 53.8
Nitab4.5_0000401g0170 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.2e-13 76.6 52 71.2
Nitab4.5_0000810g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.1e-12 76.3 52 69.2
Nitab4.5_0001206g0100 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.1e-12 76.3 52 69.2
Nitab4.5_0004666g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.1e-12 76.3 52 73.1
Nitab4.5_0000087g0050 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.4e-12 75.9 50 72.0
Nitab4.5_0000356g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.4e-12 75.1 46 78.3
Nitab4.5_0000076g0170 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.1e-12 74.7 52 67.3
Nitab4.5_0000085g0240 Nicotiana tabacum HOM05D001454 ORTHO05D000007 3.1e-12 74.7 67 55.2
Nitab4.5_0000751g0120 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.1e-12 74.7 51 70.6
Nitab4.5_0007885g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.1e-12 74.7 52 69.2
Nitab4.5_0000004g0270 Nicotiana tabacum HOM05D000801 ORTHO05D000007 4.1e-12 74.3 52 69.2
Nitab4.5_0001010g0050 Nicotiana tabacum HOM05D000801 ORTHO05D000007 4.1e-12 74.3 52 65.4
Nitab4.5_0000111g0220 Nicotiana tabacum HOM05D001454 ORTHO05D000007 5.3e-12 73.9 52 65.4
Nitab4.5_0000324g0140 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.3e-12 73.9 46 69.6
Nitab4.5_0002166g0050 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.3e-12 73.9 52 69.2
Nitab4.5_0000732g0100 Nicotiana tabacum HOM05D000801 ORTHO05D000007 9.1e-12 73.2 52 71.2
Nitab4.5_0007271g0010 Nicotiana tabacum HOM05D001454 ORTHO05D006296 9.1e-12 73.2 52 69.2
Nitab4.5_0002033g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.2e-11 72.8 52 69.2
Nitab4.5_0012255g0010 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.2e-11 72.8 56 67.9
Nitab4.5_0000530g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.6e-11 72.4 52 63.5
Nitab4.5_0002194g0040 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.0e-11 72.0 52 67.3
Nitab4.5_0000003g0140 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.6e-11 71.6 51 68.6
Nitab4.5_0000751g0100 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.6e-11 71.6 50 64.0
Nitab4.5_0000020g0170 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.9e-11 70.5 65 53.8
Peaxi162Scf00004g00127 Petunia axillaris HOM05D000801 ORTHO05D000007 5.9e-11 70.5 49 63.3
Peaxi162Scf00183g00717 Petunia axillaris HOM05D000801 ORTHO05D000007 7.7e-11 70.1 44 65.9
Nitab4.5_0001153g0200 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.0e-10 69.7 52 61.5
PGSC0003DMG400023126 Solanum tuberosum HOM05D000801 ORTHO05D000007 1.0e-10 69.7 50 60.0
Nitab4.5_0000327g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.2e-10 68.6 50 60.0
Nitab4.5_0003445g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.2e-10 68.6 53 56.6
Nitab4.5_0000669g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.0e-10 67.4 40 72.5
Nitab4.5_0001445g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.0e-10 67.4 52 67.3
Nitab4.5_0003905g0020 Nicotiana tabacum HOM05D001454 ORTHO05D000007 5.0e-10 67.4 51 60.8
Nitab4.5_0000280g0090 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.5e-10 66.6 52 57.7
Nitab4.5_0000557g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.1e-09 66.2 49 65.3
Nitab4.5_0009212g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.1e-09 66.2 52 63.5
Nitab4.5_0000280g0100 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.5e-09 65.9 52 57.7
Nitab4.5_0000797g0090 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.5e-09 65.9 39 79.5
Nitab4.5_0001016g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.5e-09 65.1 46 65.2
Nitab4.5_0000179g0090 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.2e-09 64.7 46 67.4
Nitab4.5_0004157g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 4.2e-09 64.3 47 66.0
Nitab4.5_0000194g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.2e-08 62.8 39 76.9
Nitab4.5_0003727g0040 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.2e-08 62.8 52 57.7
PGSC0003DMG400017480 Solanum tuberosum HOM05D000801 ORTHO05D000007 1.2e-08 62.8 49 57.1
Nitab4.5_0001972g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.6e-08 62.4 42 66.7
Nitab4.5_0000029g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.7e-08 61.6 42 71.4
Nitab4.5_0000065g0130 Nicotiana tabacum HOM05D001454 ORTHO05D000007 3.6e-08 61.2 36 77.8
Nitab4.5_0000175g0320 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.6e-08 61.2 65 50.8
Nitab4.5_0005378g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.6e-08 61.2 54 59.3
Nitab4.5_0000065g0230 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.0e-08 60.1 42 61.9
Nitab4.5_0000489g0050 Nicotiana tabacum HOM05D001454 ORTHO05D000007 8.0e-08 60.1 43 65.1
Nitab4.5_0000580g0360 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.0e-08 60.1 36 77.8
Peaxi162Scf00148g00035 Petunia axillaris HOM05D000801 ORTHO05D000007 8.0e-08 60.1 67 46.3
CAN.G1209.8 Capsicum annuum HOM05D000890 ORTHO05D000697 1.0e-07 59.7 50 52.0
Nitab4.5_0000919g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.0e-07 59.7 66 43.9
Nitab4.5_0000289g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.8e-07 58.9 42 59.5
Nitab4.5_0000429g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.8e-07 58.9 43 65.1
PGSC0003DMG400037991 Solanum tuberosum HOM05D000801 ORTHO05D000007 1.8e-07 58.9 49 59.2
Nitab4.5_0003999g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.3e-07 58.5 37 75.7
PGSC0003DMG400015724 Solanum tuberosum HOM05D000801 ORTHO05D000007 2.3e-07 58.5 49 59.2
Nitab4.5_0003398g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 3.0e-07 58.2 66 51.5
Peaxi162Scf00898g00001 Petunia axillaris HOM05D000801 ORTHO05D000007 3.0e-07 58.2 50 48.0
Nitab4.5_0000435g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 4.0e-07 57.8 52 59.6
PGSC0003DMG400038767 Solanum tuberosum HOM05D000801 ORTHO05D000007 4.0e-07 57.8 49 59.2
Nitab4.5_0000211g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.2e-07 57.4 36 69.4
Nitab4.5_0002547g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.2e-07 57.4 39 66.7
Nitab4.5_0000221g0140 Nicotiana tabacum HOM05D001454 ORTHO05D000007 6.7e-07 57.0 38 73.7
PGSC0003DMG400039083 Solanum tuberosum HOM05D000801 ORTHO05D000007 6.7e-07 57.0 49 49.0
Nitab4.5_0000035g0350 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.8e-07 56.6 37 70.3
PGSC0003DMG400047268 Solanum tuberosum HOM05D000801 ORTHO05D000007 8.8e-07 56.6 49 57.1
Nitab4.5_0001705g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.2e-06 56.2 41 61.0
Nitab4.5_0001883g0040 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.0e-06 55.5 38 65.8
Nitab4.5_0002936g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.0e-06 55.5 39 71.8
PGSC0003DMG400021483 Solanum tuberosum HOM05D000801 ORTHO05D000007 2.0e-06 55.5 49 51.0
Nitab4.5_0000002g0250 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.6e-06 55.1 34 76.5
Nitab4.5_0003665g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.6e-06 55.1 51 43.1
PGSC0003DMG400042531 Solanum tuberosum HOM05D000801 ORTHO05D000007 3.3e-06 54.7 49 53.1
PGSC0003DMG400045070 Solanum tuberosum HOM05D000801 ORTHO05D000007 4.4e-06 54.3 47 55.3
Nitab4.5_0000729g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.7e-06 53.9 46 52.2
Nitab4.5_0000735g0040 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.7e-06 53.9 51 43.1
Nitab4.5_0000904g0050 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.7e-06 53.9 38 71.1
Nitab4.5_0001633g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.7e-06 53.9 51 43.1
Nitab4.5_0004733g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 5.7e-06 53.9 50 40.0
Peaxi162Scf00137g01513 Petunia axillaris HOM05D000801 ORTHO05D000007 5.7e-06 53.9 52 48.1
Nitab4.5_0000001g0260 Nicotiana tabacum HOM05D000801 ORTHO05D000007 7.5e-06 53.5 53 52.8
Nitab4.5_0000036g0600 Nicotiana tabacum HOM05D000013 ORTHO05D000011 7.5e-06 53.5 36 66.7
PGSC0003DMG400035600 Solanum tuberosum HOM05D000801 ORTHO05D000007 7.5e-06 53.5 51 45.1
Nitab4.5_0002719g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 9.7e-06 53.1 51 43.1


User provided reference genes

Program Settings