Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001339g0140 Nicotiana tabacum HOM05D000189 ORTHO05D007330 1.1e-56 223.0 107 100.0
Peaxi162Scf00020g02341 Petunia axillaris HOM05D000189 ORTHO05D007330 1.8e-27 125.9 74 79.7
Nitab4.5_0007530g0030 Nicotiana tabacum HOM05D000189 ORTHO05D007330 4.0e-27 124.8 74 78.4
Solyc02g089220.4 Solanum lycopersicum HOM05D000189 ORTHO05D007330 4.0e-27 124.8 74 79.7
Dinv34909 Davidia involucrata HOM05D000189 ORTHO05D007330 1.2e-26 123.2 74 77.0
Sopen02g034010 Solanum pennellii HOM05D000189 ORTHO05D007330 1.2e-26 123.2 74 78.4
Oeu062177.2 Olea europaea HOM05D000189 ORTHO05D007330 3.4e-26 121.7 66 83.3
PGSC0003DMG400001467 Solanum tuberosum HOM05D000189 ORTHO05D007330 3.4e-26 121.7 74 77.0
CAN.G497.72 Capsicum annuum HOM05D000189 ORTHO05D007330 4.5e-26 121.3 65 87.7
Hma1.2p1_0474F.1_g160720 Hydrangea macrophylla HOM05D000189 ORTHO05D007330 7.6e-26 120.6 65 84.6
Lsat_1_v5_gn_2_90260 Lactuca sativa HOM05D000189 ORTHO05D007330 7.6e-26 120.6 65 83.1
Cc07_g04460 Coffea canephora HOM05D000189 ORTHO05D007330 2.2e-25 119.0 74 71.6
SGA_v2.0_scaffold52G19101 Striga asiatica HOM05D000189 ORTHO05D007330 2.2e-25 119.0 71 78.9
ECA238G0071 Erigeron canadensis HOM05D000189 ORTHO05D007330 3.8e-25 118.2 74 74.3
HanXRQChr14g0452471 Helianthus annuus HOM05D000189 ORTHO05D007330 6.4e-25 117.5 74 73.0
COL.COLO4_04522 Corchorus olitorius HOM05D000189 ORTHO05D007330 1.1e-24 116.7 65 83.1
MD17G1065600 Malus domestica HOM05D000189 ORTHO05D007330 1.1e-24 116.7 74 74.3
Prupe.3G249200 Prunus persica HOM05D000189 ORTHO05D007330 1.1e-24 116.7 65 81.5
Lj4A123T21 Lonicera japonica HOM05D000189 ORTHO05D007330 1.9e-24 115.9 74 73.0
MD09G1074200 Malus domestica HOM05D000189 ORTHO05D007330 1.9e-24 115.9 65 83.1
Cpa.g.sc14.227 Carica papaya HOM05D000189 ORTHO05D007330 2.4e-24 115.5 65 81.5
Gohir.D11G165900 Gossypium hirsutum HOM05D000189 ORTHO05D007330 2.4e-24 115.5 65 80.0
Phvul.008G027700 Phaseolus vulgaris HOM05D000189 ORTHO05D007330 2.4e-24 115.5 65 80.0
VMungo1383G1536 Vigna mungo HOM05D000189 ORTHO05D007330 2.4e-24 115.5 65 80.0
Actinidia18078 Actinidia chinensis HOM05D000189 ORTHO05D007330 4.2e-24 114.8 74 73.0
CSS0047139 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007330 4.2e-24 114.8 74 73.0
Ciclev10011633m.g Citrus clementina HOM05D000189 ORTHO05D007330 4.2e-24 114.8 65 80.0
Duzib138G0751 Durio zibethinus HOM05D000189 ORTHO05D007330 4.2e-24 114.8 65 80.0
Manes.01G103300 Manihot esculenta HOM05D000189 ORTHO05D007330 4.2e-24 114.8 74 71.6
ATR0827G051 Amborella trichopoda HOM05D000189 ORTHO05D007330 5.4e-24 114.4 74 70.3
Gorai.007G176900 Gossypium raimondii HOM05D000189 ORTHO05D007330 5.4e-24 114.4 65 80.0
Gohir.A11G159800 Gossypium hirsutum HOM05D000189 ORTHO05D007330 7.1e-24 114.0 65 80.0
RcHm_v2.0_Chr2g0164931 Rosa chinensis HOM05D000189 ORTHO05D007330 7.1e-24 114.0 65 80.0
Migut.H00588 Erythranthe guttata HOM05D000189 ORTHO05D007330 9.3e-24 113.6 74 70.3
Haze_14383 Corylus avellana HOM05D000189 ORTHO05D007330 1.2e-23 113.2 74 71.6
DCAR_011021 Daucus carota HOM05D000189 ORTHO05D007330 1.6e-23 112.8 74 68.9
Medtr7g016640 Medicago truncatula HOM05D000189 ORTHO05D007330 1.6e-23 112.8 65 80.0
TAR374G0496 Trochodendron aralioides HOM05D000189 ORTHO05D007330 2.1e-23 112.5 65 78.5
Glyma.08G250900 Glycine max HOM05D000189 ORTHO05D007330 2.7e-23 112.1 65 76.9
CANSAT64G0162 Cannabis sativa HOM05D000189 ORTHO05D007330 3.5e-23 111.7 65 78.5
SalBow1G6699 Salvia bowleyana HOM05D000189 ORTHO05D007330 3.5e-23 111.7 65 78.5
FvH4_6g46400 Fragaria vesca HOM05D000189 ORTHO05D007330 4.6e-23 111.3 65 78.5
FAN14G4726 Fragaria x ananassa HOM05D000189 ORTHO05D007330 4.6e-23 111.3 65 78.5
Cfa007694 Carpinus fangiana HOM05D000189 ORTHO05D007330 6.0e-23 110.9 74 70.3
Hund31102 Selenicereus undatus HOM05D000189 ORTHO05D007330 6.0e-23 110.9 65 76.9
Atru.chr8.653 Acer truncatum HOM05D000189 ORTHO05D007330 7.9e-23 110.5 65 76.9
Aqoxy3G00541 Aquilegia oxysepala HOM05D000189 ORTHO05D007330 7.9e-23 110.5 65 75.4
Lj1g0019235 Lotus japonicus HOM05D000189 ORTHO05D007330 7.9e-23 110.5 65 76.9
Aa31LG5G12840 Aethionema arabicum HOM05D000189 ORTHO05D007330 1.0e-22 110.2 65 80.0
AT3G02300 Arabidopsis thaliana HOM05D000189 ORTHO05D007330 1.0e-22 110.2 65 80.0
CARHR076260 Cardamine hirsuta HOM05D000189 ORTHO05D007330 1.0e-22 110.2 65 80.0
FAN02G0545 Fragaria x ananassa HOM05D000189 ORTHO05D007330 1.0e-22 110.2 85 63.5
Thecc.04G106000 Theobroma cacao HOM05D000189 ORTHO05D007330 1.0e-22 110.2 65 78.5
GSVIVG01036548001 Vitis vinifera HOM05D000189 ORTHO05D007330 1.0e-22 110.2 74 68.9
AL3G11580 Arabidopsis lyrata HOM05D000189 ORTHO05D007330 1.3e-22 109.8 65 80.0
arahy.Tifrunner.gnm1.ann1.61MS4Z Arachis hypogaea HOM05D000189 ORTHO05D007330 1.3e-22 109.8 65 75.4
arahy.Tifrunner.gnm1.ann1.G8XV3D Arachis hypogaea HOM05D000189 ORTHO05D007330 1.3e-22 109.8 65 75.4
BolC5t35091H Brassica oleracea HOM05D000189 ORTHO05D007330 1.3e-22 109.8 65 80.0
FAN05G0380 Fragaria x ananassa HOM05D000189 ORTHO05D007330 1.3e-22 109.8 65 76.9
Zm00001eb049950 Zea mays HOM05D000189 ORTHO05D007330 1.3e-22 109.8 74 68.9
Eucgr.I02060 Eucalyptus grandis HOM05D000189 ORTHO05D007330 1.8e-22 109.4 65 75.4
vmacro18129 Vaccinium macrocarpon HOM05D000189 ORTHO05D007330 1.8e-22 109.4 74 68.9
Carub.0003s0141 Capsella rubella HOM05D000189 ORTHO05D007330 2.3e-22 109.0 65 78.5
Ca_06901_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007330 2.3e-22 109.0 65 76.9
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 3.0e-22 108.6 65 78.5
BcaC05g30349 Brassica carinata HOM05D000189 ORTHO05D007330 3.0e-22 108.6 65 78.5
A05p45160 Brassica napus HOM05D000990 ORTHO05D007330 3.0e-22 108.6 65 78.5
C09p75650 Brassica napus HOM05D000189 ORTHO05D007330 3.0e-22 108.6 65 78.5
BraA05t23145Z Brassica rapa HOM05D000189 ORTHO05D007330 3.0e-22 108.6 65 78.5
Sp3g01360 Schrenkiella parvula HOM05D000189 ORTHO05D007330 3.0e-22 108.6 65 78.5
TPR.G23400 Trifolium pratense HOM05D000189 ORTHO05D007330 3.0e-22 108.6 65 78.5
TWI34G1434 Tripterygium wilfordii HOM05D000189 ORTHO05D007330 3.0e-22 108.6 65 76.9
FAN09G3709 Fragaria x ananassa HOM05D000189 ORTHO05D007330 3.9e-22 108.2 65 75.4
Psat3g203440 Pisum sativum HOM05D000189 ORTHO05D007330 3.9e-22 108.2 65 75.4
QL02p065882 Quercus lobata HOM05D000189 ORTHO05D007330 3.9e-22 108.2 74 67.6
Rhsim08G0076900 Rhododendron simsii HOM05D000189 ORTHO05D007330 3.9e-22 108.2 74 68.9
Glyma.18G273700 Glycine max HOM05D000189 ORTHO05D007330 6.7e-22 107.5 65 75.4
ClCG11G004960 Citrullus lanatus HOM05D000189 ORTHO05D007330 8.7e-22 107.1 65 75.4
Potri.017G099900 Populus trichocarpa HOM05D000189 ORTHO05D007330 8.7e-22 107.1 65 76.9
THA.LOC104827139 Tarenaya hassleriana HOM05D000189 ORTHO05D007330 8.7e-22 107.1 65 78.5
HPP92_019345 Vanilla planifolia HOM05D000189 ORTHO05D007330 8.7e-22 107.1 74 64.9
CiPaw.03G083200 Carya illinoinensis HOM05D000189 ORTHO05D007330 1.1e-21 106.7 74 68.9
Sed0014999 Sechium edule HOM05D000990 ORTHO05D007330 1.1e-21 106.7 65 73.8
Lalb_Chr17g0336801 Lupinus albus HOM05D000189 ORTHO05D007330 1.9e-21 105.9 65 75.4
unitig_899.g15109 Utricularia gibba HOM05D000189 ORTHO05D007330 1.9e-21 105.9 80 61.2
EL10Ac2g04443 Beta vulgaris HOM05D000189 ORTHO05D007330 2.5e-21 105.5 73 67.1
CDE07G0563 Ceratophyllum demersum HOM05D000189 ORTHO05D007330 2.5e-21 105.5 78 64.1
MBI16_g47654_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007330 2.5e-21 105.5 74 64.9
CsaV3_5G038680 Cucumis sativus L. HOM05D000189 ORTHO05D007330 3.3e-21 105.1 65 75.4
Nn4g23512 Nelumbo nucifera HOM05D000189 ORTHO05D007330 3.3e-21 105.1 74 66.2
PGR004G1516 Punica granatum HOM05D000189 ORTHO05D007330 3.3e-21 105.1 65 75.4
Thhalv10020658m.g Eutrema salsugineum HOM05D000189 ORTHO05D007330 5.6e-21 104.4 65 75.4
Os03g0599600 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007330 5.6e-21 104.4 74 63.5
MSTRG.2975 Avicennia marina HOM05D000189 ORTHO05D007330 9.6e-21 103.6 74 64.9
Sc10g0000610 Simmondsia chinensis HOM05D000189 ORTHO05D007330 1.3e-20 103.2 74 62.2
MELO3C022048.2 Cucumis melo HOM05D000189 ORTHO05D007330 4.8e-20 101.3 74 64.9
Hund16232 Selenicereus undatus HOM05D000189 ORTHO05D007330 8.1e-20 100.5 74 63.5
PSO782G3249 Papaver somniferum HOM05D000189 ORTHO05D007330 1.1e-19 100.1 74 63.5
AUR62023161 Chenopodium quinoa HOM05D000189 ORTHO05D007330 1.4e-19 99.8 73 63.0
arahy.Tifrunner.gnm1.ann1.S68E1F Arachis hypogaea HOM05D000189 ORTHO05D007330 3.1e-19 98.6 73 61.6
PSO063G0484 Papaver somniferum HOM05D000189 ORTHO05D007330 3.1e-19 98.6 74 63.5
Ah.16g101050 Amaranthus hybridus HOM05D000189 ORTHO05D007330 1.5e-18 96.3 74 60.8
arahy.Tifrunner.gnm1.ann1.9A4A6D Arachis hypogaea HOM05D000189 ORTHO05D007330 2.9e-17 92.0 64 64.1
SEGI_41379 Sequoiadendron giganteum HOM05D000189 ORTHO05D007330 6.0e-15 84.3 74 51.4
Lju361A6T20 Lonicera japonica HOM05D000189 ORTHO05D007330 2.1e-12 75.9 48 72.9
SMO146G0401 Selaginella moellendorffii HOM05D000189 ORTHO05D007330 2.6e-10 68.9 65 50.8
CBR_g41104 Chara braunii HOM05D000189 ORTHO05D007330 4.5e-10 68.2 67 49.3
Lalb_Chr10g0092741 Lupinus albus HOM05D000189 ORTHO05D007330 1.9e-08 62.8 65 50.8


User provided reference genes

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