Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 1.1e-222 776.2 365 100.0
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 5.6e-214 747.3 369 95.4
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 8.5e-202 706.8 365 89.6
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 5.7e-198 694.1 367 87.7
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 5.7e-198 694.1 365 87.9
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 5.7e-198 694.1 365 87.7
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 4.8e-197 691.0 365 87.7
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 6.5e-170 600.9 361 74.8
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 5.2e-167 591.3 359 74.7
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 1.5e-166 589.7 359 73.5
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 9.8e-166 587.0 359 72.4
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 9.1e-164 580.5 359 71.9
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 2.7e-163 578.9 338 74.9
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 5.0e-162 574.7 363 73.8
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 8.0e-160 567.4 360 73.6
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 4.0e-159 565.1 343 72.6
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 5.2e-159 564.7 361 69.8
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 4.4e-158 561.6 360 70.8
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 4.5e-155 551.6 355 70.1
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 2.5e-153 545.8 363 68.3
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 4.3e-153 545.0 361 67.9
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 9.5e-153 543.9 361 67.6
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 1.2e-152 543.5 359 66.9
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 1.2e-152 543.5 361 67.6
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 1.6e-152 543.1 359 68.5
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 2.8e-152 542.3 366 69.1
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 4.7e-152 541.6 362 66.3
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 1.8e-151 539.7 360 66.4
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 2.3e-151 539.3 361 65.9
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 3.1e-151 538.9 357 68.1
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 3.1e-151 538.9 360 67.2
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 5.2e-151 538.1 359 65.5
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 1.2e-150 537.0 348 69.3
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 2.6e-150 535.8 363 67.5
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 4.4e-150 535.0 355 66.8
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 1.3e-149 533.5 346 69.4
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 2.9e-149 532.3 363 66.9
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 3.7e-149 531.9 359 66.3
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 3.7e-149 531.9 358 67.3
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 3.7e-149 531.9 358 67.3
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 1.1e-148 530.4 358 64.0
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 2.4e-148 529.3 360 66.4
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 2.4e-148 529.3 358 66.5
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 3.2e-148 528.9 364 66.2
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 7.0e-148 527.7 346 69.1
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 1.2e-147 526.9 360 66.7
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 1.6e-147 526.6 358 63.4
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 2.7e-147 525.8 360 66.7
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 4.6e-147 525.0 358 64.0
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 6.0e-147 524.6 358 64.0
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 6.0e-147 524.6 357 64.1
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 6.0e-147 524.6 357 65.0
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 1.0e-146 523.9 357 64.1
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 1.0e-146 523.9 358 64.8
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 1.0e-146 523.9 311 73.3
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 1.3e-146 523.5 358 64.0
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 3.0e-146 522.3 359 66.0
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 3.0e-146 522.3 356 66.0
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 3.9e-146 521.9 357 63.9
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 3.9e-146 521.9 357 63.9
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 3.9e-146 521.9 453 56.3
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 5.0e-146 521.5 358 64.5
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 1.1e-145 520.4 357 64.1
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 2.5e-145 519.2 354 63.8
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 2.5e-145 519.2 354 65.3
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 5.6e-145 518.1 361 65.1
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 7.3e-145 517.7 346 65.0
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 9.5e-145 517.3 346 67.9
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 1.6e-144 516.5 342 66.7
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 1.6e-144 516.5 360 63.3
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 4.7e-144 515.0 358 62.0
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 6.2e-144 514.6 358 62.8
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 1.1e-143 513.8 358 63.4
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 3.1e-143 512.3 363 63.4
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 4.0e-143 511.9 341 67.7
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 4.0e-143 511.9 358 62.8
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 5.2e-143 511.5 341 68.0
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 1.2e-142 510.4 350 66.6
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 4.4e-142 508.4 393 62.1
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 1.7e-141 506.5 364 62.4
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 3.7e-141 505.4 319 69.3
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 4.9e-141 505.0 318 69.5
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 4.9e-141 505.0 318 69.5
Rhsim11G0096600 Rhododendron simsii HOM05D005172 ORTHO05D006324 1.1e-140 503.8 448 54.0
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 5.4e-140 501.5 318 69.2
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 1.2e-139 500.4 322 70.2
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 2.1e-139 499.6 355 65.6
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 1.0e-138 497.3 361 66.5
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 1.3e-138 496.9 367 59.1
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 2.3e-138 496.1 358 59.5
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 3.0e-138 495.7 359 63.8
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 1.1e-137 493.8 358 61.5
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 1.5e-137 493.4 353 62.3
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 7.3e-137 491.1 360 60.8
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 3.6e-136 488.8 351 61.3
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 4.7e-136 488.4 327 65.4
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 1.1e-135 487.3 351 61.0
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 1.8e-135 486.5 351 60.7
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 8.9e-135 484.2 362 62.2
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 5.8e-134 481.5 360 63.6
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 2.9e-133 479.2 352 60.5
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 7.3e-129 464.5 361 59.6
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 2.1e-128 463.0 361 59.6
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 2.1e-128 463.0 331 61.9
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 2.0e-126 456.4 359 58.2
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 3.4e-126 455.7 358 62.6
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 4.9e-125 451.8 311 67.2
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 2.4e-124 449.5 373 59.5
Cpa.g.sc18.70 Carica papaya HOM05D005172 ORTHO05D006324 4.6e-123 445.3 357 58.0
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 1.1e-116 424.1 267 67.8
Manes.05G006214 Manihot esculenta HOM05D005172 ORTHO05D006324 5.4e-116 421.8 275 66.5
Manes.05G008035 Manihot esculenta HOM05D005172 ORTHO05D006324 1.2e-115 420.6 275 66.2
Manes.05G012891 Manihot esculenta HOM05D005172 ORTHO05D006324 1.0e-114 417.5 275 65.8
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 1.7e-114 416.8 354 55.4
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 1.1e-111 407.5 315 63.2
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 4.5e-110 402.1 286 65.0
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 9.3e-108 394.4 264 67.0
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 3.5e-107 392.5 296 59.5
FAN20G2313 Fragaria x ananassa HOM05D005172 ORTHO05D006324 5.1e-98 362.1 229 68.1
FAN20G2797 Fragaria x ananassa HOM05D005172 ORTHO05D006324 1.4e-95 354.0 251 62.9
Oeu000005.1 Olea europaea HOM05D005172 ORTHO05D006324 1.2e-94 350.9 231 68.4
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 5.8e-94 348.6 361 46.0
Ciclev10020948m.g Citrus clementina HOM05D005172 ORTHO05D006324 8.4e-93 344.7 210 71.9
Nitab4.5_0003540g0100 Nicotiana tabacum HOM05D005172 ORTHO05D006324 7.2e-92 341.7 227 65.2
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 7.4e-89 331.6 281 55.2
Nitab4.5_0006240g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 3.8e-85 319.3 333 48.6
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 5.0e-85 318.9 362 45.0
Lalb_Chr06g0166961 Lupinus albus HOM05D005172 ORTHO05D006324 6.5e-85 318.5 218 63.3
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 2.5e-84 316.6 361 45.7
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 2.5e-81 306.6 322 46.0
Ciclev10024074m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.3e-77 294.3 209 64.1
COL.COLO4_23212 Corchorus olitorius HOM05D005172 ORTHO05D006324 1.1e-76 291.2 182 70.3
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 1.4e-76 290.8 321 47.0
Gohir.A12G123800 Gossypium hirsutum HOM05D005172 ORTHO05D006324 9.1e-71 271.6 210 59.0
TPR.G38637 Trifolium pratense HOM05D005172 ORTHO05D006324 2.0e-70 270.4 191 62.8
Peaxi162Scf00691g00617 Petunia axillaris HOM05D005172 ORTHO05D006324 3.7e-56 223.0 245 43.7
Ciclev10023330m.g Citrus clementina HOM05D005172 ORTHO05D006324 7.7e-54 215.3 152 65.8
Lalb_Chr06g0166951 Lupinus albus HOM05D005172 ORTHO05D006324 4.4e-49 199.5 155 57.4
Oeu008479.1 Olea europaea HOM05D005172 ORTHO05D006324 6.3e-48 195.7 141 63.1
CAN.G1071.4 Capsicum annuum HOM05D005172 ORTHO05D006324 1.0e-45 188.3 100 87.0
CBR_g51501 Chara braunii HOM05D005172 ORTHO05D006324 1.3e-40 171.4 229 43.7
Ciclev10023884m.g Citrus clementina HOM05D005172 ORTHO05D006324 8.0e-35 152.1 109 67.0
TPR.G38640 Trifolium pratense HOM05D005172 ORTHO05D006324 4.0e-34 149.8 103 64.1
COL.COLO4_23213 Corchorus olitorius HOM05D005172 ORTHO05D006324 4.4e-25 119.8 96 57.3
SMO163G0002 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 1.9e-20 104.4 94 45.7
CBR_g51503 Chara braunii HOM05D005172 ORTHO05D006324 1.5e-12 78.2 106 34.9


User provided reference genes

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