Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 3.4e-82 308.5 187 100.0
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 2.4e-75 285.8 188 94.7
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 3.3e-32 142.5 155 71.0
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 4.1e-27 125.6 140 72.1
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 7.0e-27 124.8 123 53.7
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 2.0e-26 123.2 140 71.4
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 3.5e-26 122.5 114 53.5
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 7.8e-26 121.3 116 55.2
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 7.8e-26 121.3 115 51.3
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.0e-25 120.9 115 53.0
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.0e-25 120.9 122 50.8
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.7e-25 120.2 115 53.9
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 1.7e-25 120.2 117 51.3
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 3.0e-25 119.4 158 60.8
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 3.9e-25 119.0 115 53.9
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 5.0e-25 118.6 112 50.9
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 6.6e-25 118.2 114 51.8
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 1.1e-24 117.5 114 53.5
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 3.3e-24 115.9 124 51.6
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 1.2e-23 114.0 126 50.8
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 1.6e-23 113.6 123 49.6
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.6e-23 113.6 126 49.2
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 2.1e-23 113.2 153 62.7
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.8e-23 112.8 125 52.8
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 3.6e-23 112.5 126 48.4
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 4.7e-23 112.1 161 61.5
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 6.2e-23 111.7 113 48.7
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 8.1e-23 111.3 123 47.2
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 8.1e-23 111.3 125 49.6
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 8.1e-23 111.3 124 50.0
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 8.1e-23 111.3 124 50.0
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 8.1e-23 111.3 125 50.4
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 8.1e-23 111.3 114 50.9
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 1.1e-22 110.9 155 58.7
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 1.4e-22 110.5 120 47.5
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 1.4e-22 110.5 121 47.9
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 1.8e-22 110.2 122 48.4
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 1.8e-22 110.2 121 47.9
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 2.3e-22 109.8 164 58.5
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 3.1e-22 109.4 153 60.1
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 4.0e-22 109.0 124 69.4
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 4.0e-22 109.0 79 60.8
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 4.0e-22 109.0 153 61.4
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 5.2e-22 108.6 117 51.3
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.2e-22 108.6 83 60.2
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 8.9e-22 107.8 124 49.2
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 8.9e-22 107.8 124 49.2
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 8.9e-22 107.8 124 49.2
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 8.9e-22 107.8 125 52.0
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.2e-21 107.5 167 50.9
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.5e-21 107.1 113 49.6
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 2.0e-21 106.7 87 54.0
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 4.4e-21 105.5 115 50.4
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 4.4e-21 105.5 86 55.8
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 7.5e-21 104.8 114 50.9
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.5e-21 104.8 130 46.9
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 9.8e-21 104.4 130 44.6
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 9.8e-21 104.4 130 44.6
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.8e-21 104.4 130 44.6
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 9.8e-21 104.4 168 57.7
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 1.3e-20 104.0 79 60.8
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.3e-20 104.0 130 44.6
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.3e-20 104.0 125 44.0
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.7e-20 103.6 115 53.9
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 2.2e-20 103.2 86 60.5
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 2.2e-20 103.2 153 56.9
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.2e-20 103.2 130 43.8
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.7e-20 102.4 161 58.4
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 3.7e-20 102.4 114 45.6
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 4.9e-20 102.1 167 59.3
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 4.9e-20 102.1 161 58.4
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 6.4e-20 101.7 162 58.0
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 6.4e-20 101.7 123 48.8
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 1.1e-19 100.9 166 54.2
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 1.9e-19 100.1 116 48.3
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 2.4e-19 99.8 123 46.3
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 7.1e-19 98.2 118 47.5
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 7.1e-19 98.2 114 48.2
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 9.2e-19 97.8 118 47.5
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 9.2e-19 97.8 114 46.5
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 2.1e-18 96.7 117 47.9
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 1.7e-17 93.6 112 67.9
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 3.0e-17 92.8 115 44.3
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.9e-17 92.4 123 42.3
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 6.6e-17 91.7 61 62.3
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.6e-17 91.3 58 67.2
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 8.6e-17 91.3 100 78.0
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 1.5e-16 90.5 115 42.6
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.5e-16 90.5 123 43.1
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.5e-16 89.7 155 58.7
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 3.3e-16 89.4 68 55.9
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 4.7e-15 85.5 112 65.2
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 8.1e-15 84.7 112 42.0
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 8.1e-15 84.7 109 42.2
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 1.1e-14 84.3 110 42.7
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.4e-14 84.0 72 45.8
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 3.1e-14 82.8 78 51.3
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 6.8e-14 81.6 126 42.1
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 1.5e-13 80.5 110 44.5
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 4.4e-13 79.0 88 47.7
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 1.6e-10 70.5 117 35.0
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 1.2e-07 60.8 58 51.7
Sabra04G0003900 Salix brachista HOM05D002014 ORTHO05D001958 3.1e-06 56.2 134 33.6
Aqoxy4G01492 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 6.8e-06 55.1 125 36.0
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 8.9e-06 54.7 90 38.9


User provided reference genes

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