Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001328g0090 Nicotiana tabacum HOM05D000159 ORTHO05D000148 2.3e-111 405.6 211 100.0
Nitab4.5_0010172g0010 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.9e-76 289.7 211 74.9
Peaxi162Scf00740g00545 Petunia axillaris HOM05D000159 ORTHO05D000148 2.3e-66 256.1 209 70.3
Nitab4.5_0002041g0010 Nicotiana tabacum HOM05D000159 ORTHO05D000148 2.3e-58 229.6 210 63.3
Nitab4.5_0001797g0070 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.5e-57 226.9 210 61.4
Peaxi162Scf00365g00310 Petunia axillaris HOM05D000159 ORTHO05D000148 8.1e-56 221.1 209 60.8
PGSC0003DMG400023260 Solanum tuberosum HOM05D000159 ORTHO05D000148 6.0e-51 204.9 209 57.4
Solyc12g038520.3 Solanum lycopersicum HOM05D000159 ORTHO05D000148 1.5e-49 200.3 210 57.1
Sopen12g018830 Solanum pennellii HOM05D000159 ORTHO05D000148 3.3e-49 199.1 210 56.7
Nitab4.5_0002467g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.1e-47 194.1 210 53.8
Nitab4.5_0009912g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.4e-47 193.7 210 53.8
Peaxi162Scf00426g00007 Petunia axillaris HOM05D000159 ORTHO05D000148 1.5e-46 190.3 210 51.0
Sopen03g033930 Solanum pennellii HOM05D000159 ORTHO05D000148 1.5e-41 173.7 210 51.0
CAN.G1592.3 Capsicum annuum HOM05D000159 ORTHO05D000148 5.7e-41 171.8 210 49.5
Solyc03g114850.4 Solanum lycopersicum HOM05D000159 ORTHO05D000148 1.6e-40 170.2 210 49.5
COL.COLO4_24296 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.5e-38 163.7 210 47.1
PGSC0003DMG400024527 Solanum tuberosum HOM05D000159 ORTHO05D000148 6.5e-37 158.3 211 49.8
Glyma.04G159600 Glycine max HOM05D000159 ORTHO05D000148 4.6e-35 152.1 217 46.1
arahy.Tifrunner.gnm1.ann1.EUS1NI Arachis hypogaea HOM05D000159 ORTHO05D000148 1.0e-34 151.0 216 46.8
Ca_02823_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 1.0e-34 151.0 213 44.1
arahy.Tifrunner.gnm1.ann1.EG887M Arachis hypogaea HOM05D000159 ORTHO05D000148 3.0e-34 149.4 216 46.8
Duzib205G0956 Durio zibethinus HOM05D000159 ORTHO05D000148 5.1e-34 148.7 211 43.6
Dinv31030 Davidia involucrata HOM05D000159 ORTHO05D000148 7.4e-33 144.8 213 45.5
Dinv31073 Davidia involucrata HOM05D000159 ORTHO05D000148 7.4e-33 144.8 213 45.5
Prupe.5G208300 Prunus persica HOM05D000159 ORTHO05D000148 1.3e-32 144.1 215 43.7
Thecc.03G106000 Theobroma cacao HOM05D000159 ORTHO05D000148 1.3e-32 144.1 214 43.5
Dinv17446 Davidia involucrata HOM05D000159 ORTHO05D000148 1.7e-32 143.7 211 46.0
Duzib068G0346 Durio zibethinus HOM05D000159 ORTHO05D000148 1.7e-32 143.7 214 42.5
Glyma.05G019000 Glycine max HOM05D000159 ORTHO05D000148 1.4e-31 140.6 216 45.4
QL10p020226 Quercus lobata HOM05D000159 ORTHO05D000148 1.4e-31 140.6 212 42.9
Phvul.003G182900 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 1.2e-30 137.5 214 45.3
Medtr2g461920 Medicago truncatula HOM05D000159 ORTHO05D000148 3.4e-30 136.0 213 41.8
VMungo1215G2252 Vigna mungo HOM05D000159 ORTHO05D000148 4.5e-30 135.6 214 45.3
Glyma.17G080700 Glycine max HOM05D000159 ORTHO05D000148 7.7e-30 134.8 216 44.4
Psat1g127000 Pisum sativum HOM05D000159 ORTHO05D000148 1.3e-29 134.0 218 41.7
Lalb_Chr07g0178391 Lupinus albus HOM05D000159 ORTHO05D000148 1.7e-29 133.7 216 44.0
TAR622G0263 Trochodendron aralioides HOM05D000159 ORTHO05D000148 6.5e-29 131.7 215 43.3
TAR629G3162 Trochodendron aralioides HOM05D000159 ORTHO05D000148 6.5e-29 131.7 215 43.3
Nn3g17511 Nelumbo nucifera HOM05D000159 ORTHO05D000148 4.2e-28 129.0 215 40.9
TAR374G1071 Trochodendron aralioides HOM05D000159 ORTHO05D000148 1.6e-27 127.1 214 42.1
Actinidia18975 Actinidia chinensis HOM05D000159 ORTHO05D000148 2.7e-27 126.3 212 43.9
arahy.Tifrunner.gnm1.ann1.AV6HSI Arachis hypogaea HOM05D000159 ORTHO05D000148 4.7e-27 125.6 209 44.0
Lalb_Chr12g0197331 Lupinus albus HOM05D000159 ORTHO05D000148 4.7e-27 125.6 216 42.1
RcHm_v2.0_Chr7g0183501 Rosa chinensis HOM05D000159 ORTHO05D000148 4.7e-27 125.6 215 39.5
arahy.Tifrunner.gnm1.ann1.Y93M2M Arachis hypogaea HOM05D000159 ORTHO05D000148 6.1e-27 125.2 209 43.5
Manes.14G088200 Manihot esculenta HOM05D000159 ORTHO05D000148 6.1e-27 125.2 181 44.2
Cpa.g.sc1095.1 Carica papaya HOM05D000159 ORTHO05D000148 1.8e-26 123.6 175 43.4
Hma1.2p1_0060F.1_g032790 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 1.8e-26 123.6 216 37.5
Ciclev10019546m.g Citrus clementina HOM05D000159 ORTHO05D000148 3.0e-26 122.9 212 40.1
Actinidia35050 Actinidia chinensis HOM05D000159 ORTHO05D000148 8.8e-26 121.3 214 42.1
CSS0017258 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 8.8e-26 121.3 208 41.8
RcHm_v2.0_Chr7g0183471 Rosa chinensis HOM05D000159 ORTHO05D000148 8.8e-26 121.3 215 38.6
vmacro16482 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 1.5e-25 120.6 212 41.5
Atru.chr9.490 Acer truncatum HOM05D000159 ORTHO05D000148 7.4e-25 118.2 197 41.6
CSS0016212 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 2.2e-24 116.7 212 42.0
CSS0046901 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 2.8e-24 116.3 212 41.5
Lalb_Chr13g0302751 Lupinus albus HOM05D000159 ORTHO05D000148 3.7e-24 115.9 216 40.7
TPR.G14358 Trifolium pratense HOM05D000159 ORTHO05D000148 6.3e-24 115.2 213 39.4
Sed0021567 Sechium edule HOM05D000159 ORTHO05D000148 8.2e-24 114.8 210 38.1
Cfa019362 Carpinus fangiana HOM05D000159 ORTHO05D000148 1.1e-23 114.4 214 38.8
Haze_07755 Corylus avellana HOM05D000159 ORTHO05D000148 1.4e-23 114.0 214 39.3
MD14G1215300 Malus domestica HOM05D000159 ORTHO05D000148 2.4e-23 113.2 215 37.2
Nn4g23499 Nelumbo nucifera HOM05D000159 ORTHO05D000148 4.1e-23 112.5 192 39.6
Lj4g0023225 Lotus japonicus HOM05D000159 ORTHO05D000148 5.3e-23 112.1 216 41.7
MD06G1204000 Malus domestica HOM05D000159 ORTHO05D000148 5.3e-23 112.1 210 36.7
AUR62039662 Chenopodium quinoa HOM05D000159 ORTHO05D000148 1.5e-22 110.5 210 38.6
ClCG06G015490 Citrullus lanatus HOM05D000159 ORTHO05D000148 1.5e-22 110.5 210 38.6
MELO3C017245.2 Cucumis melo HOM05D000159 ORTHO05D000148 2.0e-22 110.2 210 37.6
CsaV3_1G003380 Cucumis sativus L. HOM05D000159 ORTHO05D000148 3.5e-22 109.4 210 37.6
DCAR_010171 Daucus carota HOM05D000159 ORTHO05D000148 5.9e-22 108.6 212 40.1
MELO3C002048.2 Cucumis melo HOM05D000159 ORTHO05D000148 1.0e-21 107.8 212 36.3
DCAR_014026 Daucus carota HOM05D000159 ORTHO05D000148 1.0e-21 107.8 211 37.0
Medtr4g109770 Medicago truncatula HOM05D000159 ORTHO05D000148 1.0e-21 107.8 216 41.7
MBI16_g47663_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 1.3e-21 107.5 217 38.2
Sed0005575 Sechium edule HOM05D000159 ORTHO05D000148 1.7e-21 107.1 211 35.5
CANSAT80G1002 Cannabis sativa HOM05D000159 ORTHO05D000148 2.2e-21 106.7 212 36.8
Hund02562 Selenicereus undatus HOM05D000159 ORTHO05D000148 2.9e-21 106.3 211 38.4
CsaV3_1G006200 Cucumis sativus L. HOM05D000159 ORTHO05D000148 5.0e-21 105.5 212 35.8
Sed0012987 Sechium edule HOM05D000159 ORTHO05D000148 6.5e-21 105.1 204 36.8
Sed0009479 Sechium edule HOM05D000159 ORTHO05D000148 1.9e-20 103.6 210 35.7
AUR62032118 Chenopodium quinoa HOM05D000159 ORTHO05D000148 3.2e-20 102.8 155 47.1
ClCG04G011620 Citrullus lanatus HOM05D000159 ORTHO05D000148 3.2e-20 102.8 211 36.0
Sabra15G0085700 Salix brachista HOM05D000159 ORTHO05D000148 9.4e-20 101.3 214 35.5
FvH4_5g13520 Fragaria vesca HOM05D000159 ORTHO05D000148 1.2e-19 100.9 213 33.3
FAN18G2921 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.2e-19 100.9 213 33.3
FAN13G0517 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.1e-19 100.1 213 33.8
Rhsim12G0149900 Rhododendron simsii HOM05D000159 ORTHO05D000148 2.1e-19 100.1 211 38.4
Lj9A438G55 Lonicera japonica HOM05D000159 ORTHO05D000148 5.2e-18 95.5 210 38.6
Potri.015G060400 Populus trichocarpa HOM05D000159 ORTHO05D000148 5.2e-18 95.5 215 35.8
Psat4g046440 Pisum sativum HOM05D000159 ORTHO05D000148 1.1e-17 94.4 217 38.7
FAN08G3039 Fragaria x ananassa HOM05D000159 ORTHO05D000148 4.4e-17 92.4 213 32.9
CiPaw.12G010000 Carya illinoinensis HOM05D000159 ORTHO05D000148 5.7e-17 92.0 216 35.2
Gohir.A03G071200 Gossypium hirsutum HOM05D000159 ORTHO05D000148 7.5e-17 91.7 201 38.8
Gorai.003G102800 Gossypium raimondii HOM05D000159 ORTHO05D000148 9.7e-17 91.3 201 38.8
TPR.G1985 Trifolium pratense HOM05D000159 ORTHO05D000148 9.7e-17 91.3 219 37.0
Eucgr.B00631 Eucalyptus grandis HOM05D000159 ORTHO05D000148 4.8e-16 89.0 202 35.6
Gohir.D03G097700 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.8e-15 87.0 201 37.8
Aqoxy3G03687 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 5.3e-15 85.5 212 34.0
TWI81G1068 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 1.3e-13 80.9 214 34.6
Sc12g0007020 Simmondsia chinensis HOM05D000159 ORTHO05D000148 1.6e-11 73.9 159 37.1
Eucgr.K02545 Eucalyptus grandis HOM05D000159 ORTHO05D000148 1.0e-10 71.2 221 32.6
Hund09947 Selenicereus undatus HOM05D000159 ORTHO05D000148 2.3e-10 70.1 152 38.8
GSVIVG01012247001 Vitis vinifera HOM05D000159 ORTHO05D000148 3.0e-10 69.7 138 39.1
PGR044G1979 Punica granatum HOM05D000159 ORTHO05D000148 2.0e-09 67.0 213 31.5
QL03p073536 Quercus lobata HOM05D000159 ORTHO05D000148 5.7e-09 65.5 172 36.0
PGR083G1895 Punica granatum HOM05D000159 ORTHO05D000148 7.5e-09 65.1 152 36.2
Dinv34044 Davidia involucrata HOM05D000159 ORTHO05D000148 2.2e-08 63.5 142 38.0
Atru.chr11.1593 Acer truncatum HOM05D000159 ORTHO05D000148 3.1e-07 59.7 144 36.8
Dinv20148 Davidia involucrata HOM05D000159 ORTHO05D000148 1.6e-06 57.4 139 33.8
Thecc.02G326500 Theobroma cacao HOM05D000159 ORTHO05D000148 3.5e-06 56.2 201 30.8
MBI16_g37885_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 5.9e-06 55.5 101 38.6
Haze_11877 Corylus avellana HOM05D000159 ORTHO05D000148 7.7e-06 55.1 200 32.0


User provided reference genes

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