Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001323g0010 Nicotiana tabacum HOM05D004053 ORTHO05D005065 1.7e-244 849.0 445 100.0
Nitab4.5_0008204g0020 Nicotiana tabacum HOM05D004053 ORTHO05D005065 9.6e-232 806.6 445 93.5
Peaxi162Scf00777g00211 Petunia axillaris HOM05D004053 ORTHO05D005065 6.5e-188 661.0 447 76.5
PGSC0003DMG400003799 Solanum tuberosum HOM05D004053 ORTHO05D005065 1.9e-179 632.9 447 73.6
Sopen09g028800 Solanum pennellii HOM05D004053 ORTHO05D005065 9.4e-179 630.6 447 73.6
Solyc09g072990.3 Solanum lycopersicum HOM05D004053 ORTHO05D005065 4.7e-178 628.2 447 73.6
GSVIVG01011074001 Vitis vinifera HOM05D004053 ORTHO05D005065 7.8e-109 398.3 445 49.7
Lj1C43T4 Lonicera japonica HOM05D004053 ORTHO05D005065 1.5e-104 384.0 448 48.7
Haze_04757 Corylus avellana HOM05D004053 ORTHO05D005065 2.0e-104 383.6 450 47.3
Ciclev10020315m.g Citrus clementina HOM05D004053 ORTHO05D005065 1.3e-103 380.9 450 47.3
CSS0023044 Camellia sinensis var. sinensis HOM05D004053 ORTHO05D005065 4.2e-102 375.9 451 48.6
Rhsim13G0022200 Rhododendron simsii HOM05D004053 ORTHO05D005065 2.7e-101 373.2 449 48.1
TAR362G1031 Trochodendron aralioides HOM05D004053 ORTHO05D005065 6.0e-101 372.1 454 47.6
Duzib133G0805 Durio zibethinus HOM05D004053 ORTHO05D005065 1.0e-100 371.3 450 47.6
Manes.01G210500 Manihot esculenta HOM05D004053 ORTHO05D005065 3.0e-100 369.8 452 46.7
Duzib138G0912 Durio zibethinus HOM05D004053 ORTHO05D005065 8.1e-98 361.7 451 45.2
QL12p022856 Quercus lobata HOM05D004053 ORTHO05D005065 1.8e-97 360.5 447 45.4
Cpa.g.sc9.119 Carica papaya HOM05D004053 ORTHO05D005065 4.0e-97 359.4 460 45.2
Oeu011173.1 Olea europaea HOM05D004053 ORTHO05D005065 6.9e-97 358.6 447 47.2
Actinidia24316 Actinidia chinensis HOM05D004053 ORTHO05D005065 1.5e-96 357.5 450 47.8
Cfa006097 Carpinus fangiana HOM05D004053 ORTHO05D005065 4.5e-96 355.9 450 45.6
vmacro02546 Vaccinium macrocarpon HOM05D004053 ORTHO05D005065 1.3e-95 354.4 448 47.1
Cc01_g19820 Coffea canephora HOM05D004053 ORTHO05D005065 3.8e-95 352.8 452 47.1
Atru.chr5.1352 Acer truncatum HOM05D004053 ORTHO05D005065 2.1e-93 347.1 445 44.5
Hma1.2p1_0257F.1_g103830 Hydrangea macrophylla HOM05D004053 ORTHO05D005065 2.7e-93 346.7 410 48.8
Dinv11260 Davidia involucrata HOM05D004053 ORTHO05D005065 2.3e-92 343.6 374 52.1
Gorai.007G133800 Gossypium raimondii HOM05D004053 ORTHO05D005065 3.0e-92 343.2 449 45.0
Thecc.01G284500 Theobroma cacao HOM05D004053 ORTHO05D005065 1.1e-91 341.3 450 43.8
Gohir.D11G124800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 1.5e-91 340.9 449 44.8
MSTRG.21579 Avicennia marina HOM05D004053 ORTHO05D005065 1.9e-91 340.5 449 46.3
CiPaw.07G095100 Carya illinoinensis HOM05D004053 ORTHO05D005065 3.3e-91 339.7 448 44.0
Gohir.A12G006400 Gossypium hirsutum HOM05D004053 ORTHO05D005065 2.1e-90 337.0 452 43.8
Gohir.D12G005800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 4.8e-90 335.9 452 43.6
Gorai.008G005800 Gossypium raimondii HOM05D004053 ORTHO05D005065 6.9e-89 332.0 452 43.4
Potri.014G138200 Populus trichocarpa HOM05D004053 ORTHO05D005065 5.8e-88 328.9 452 42.9
CANSAT25G0924 Cannabis sativa HOM05D004053 ORTHO05D005065 7.6e-88 328.6 446 43.3
Nn4g26160 Nelumbo nucifera HOM05D004053 ORTHO05D005065 3.8e-87 326.2 458 45.6
Potri.002G215800 Populus trichocarpa HOM05D004053 ORTHO05D005065 3.8e-87 326.2 450 42.7
TWI14G1274 Tripterygium wilfordii HOM05D004053 ORTHO05D005065 1.9e-86 323.9 452 43.8
Migut.D00258 Erythranthe guttata HOM05D004053 ORTHO05D005065 2.5e-86 323.6 447 44.3
DCAR_005821 Daucus carota HOM05D004053 ORTHO05D005065 3.2e-86 323.2 452 43.4
Prupe.8G245900 Prunus persica HOM05D004053 ORTHO05D005065 4.2e-86 322.8 446 42.6
FAN24G1933 Fragaria x ananassa HOM05D004053 ORTHO05D005065 9.3e-86 321.6 445 43.8
FvH4_2g24050 Fragaria vesca HOM05D004053 ORTHO05D005065 2.1e-85 320.5 445 43.8
FAN20G0349 Fragaria x ananassa HOM05D004053 ORTHO05D005065 2.7e-85 320.1 445 43.8
Gohir.A11G120100 Gossypium hirsutum HOM05D004053 ORTHO05D005065 4.6e-85 319.3 449 43.4
Eucgr.K03405 Eucalyptus grandis HOM05D004053 ORTHO05D005065 7.9e-85 318.5 448 42.9
RcHm_v2.0_Chr6g0291821 Rosa chinensis HOM05D004053 ORTHO05D005065 1.8e-84 317.4 443 42.9
FAN15G3549 Fragaria x ananassa HOM05D004053 ORTHO05D005065 5.1e-84 315.8 445 43.1
FAN27G0975 Fragaria x ananassa HOM05D004053 ORTHO05D005065 9.7e-83 311.6 445 43.1
Duzib211G0472 Durio zibethinus HOM05D004053 ORTHO05D005065 8.2e-82 308.5 380 47.1
Lalb_Chr06g0163121 Lupinus albus HOM05D004053 ORTHO05D005065 6.9e-81 305.4 422 43.4
Lalb_Chr21g0306591 Lupinus albus HOM05D004053 ORTHO05D005065 2.0e-80 303.9 442 40.5
TPR.G32826 Trifolium pratense HOM05D004053 ORTHO05D005065 2.0e-80 303.9 444 42.3
PSO832G4321 Papaver somniferum HOM05D004053 ORTHO05D005065 5.9e-80 302.4 455 41.8
Glyma.02G149700 Glycine max HOM05D004053 ORTHO05D005065 7.7e-80 302.0 447 41.6
MD11G1290800 Malus domestica HOM05D004053 ORTHO05D005065 1.7e-79 300.8 451 43.0
Medtr7g094470 Medicago truncatula HOM05D004053 ORTHO05D005065 1.7e-79 300.8 444 40.5
DCAR_012450 Daucus carota HOM05D004053 ORTHO05D005065 2.5e-78 297.0 431 43.6
Psat6g168840 Pisum sativum HOM05D004053 ORTHO05D005065 2.5e-78 297.0 443 38.1
Glyma.10G024200 Glycine max HOM05D004053 ORTHO05D005065 3.2e-78 296.6 451 40.6
ECA248G2902 Erigeron canadensis HOM05D004053 ORTHO05D005065 4.2e-78 296.2 444 43.2
Ca_08561_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 2.7e-77 293.5 448 41.3
Ca_08595_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 2.7e-77 293.5 448 41.3
Glyma.19G153300 Glycine max HOM05D004053 ORTHO05D005065 2.7e-77 293.5 447 40.9
Lj5g0001920 Lotus japonicus HOM05D004053 ORTHO05D005065 7.9e-77 292.0 449 39.0
Medtr1g089980 Medicago truncatula HOM05D004053 ORTHO05D005065 7.9e-77 292.0 448 39.1
MD03G1269800 Malus domestica HOM05D004053 ORTHO05D005065 2.3e-76 290.4 446 41.9
HanXRQChr02g0046661 Helianthus annuus HOM05D004053 ORTHO05D005065 5.1e-76 289.3 443 42.9
PGR044G2575 Punica granatum HOM05D004053 ORTHO05D005065 6.7e-76 288.9 449 40.1
VMungo0720G1290 Vigna mungo HOM05D004053 ORTHO05D005065 6.7e-76 288.9 446 40.1
Ca_10403_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 8.8e-76 288.5 448 37.7
SGA_v2.0_scaffold1G00444 Striga asiatica HOM05D004053 ORTHO05D005065 8.8e-76 288.5 448 40.8
SalBow6G4695 Salvia bowleyana HOM05D004053 ORTHO05D005065 1.1e-75 288.1 444 42.8
Phvul.001G148300 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 2.0e-75 287.3 448 41.3
Glyma.03G150700 Glycine max HOM05D004053 ORTHO05D005065 4.8e-74 282.7 447 41.4
Phvul.007G169200 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 1.4e-73 281.2 447 40.0
arahy.Tifrunner.gnm1.ann1.V8R19R Arachis hypogaea HOM05D004053 ORTHO05D005065 5.3e-73 279.3 444 40.5
Aqoxy5G00541 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 6.9e-73 278.9 447 39.6
Aqoxy2G03230 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 1.2e-72 278.1 461 41.4
Lj1g0006875 Lotus japonicus HOM05D004053 ORTHO05D005065 2.0e-72 277.3 460 39.1
Psat3g065760 Pisum sativum HOM05D004053 ORTHO05D005065 2.6e-72 276.9 445 39.3
arahy.Tifrunner.gnm1.ann1.K8THJN Arachis hypogaea HOM05D004053 ORTHO05D005065 1.7e-71 274.2 452 40.5
Sabra14G0104300 Salix brachista HOM05D004053 ORTHO05D005065 3.8e-71 273.1 471 37.6
HanXRQChr01g0002441 Helianthus annuus HOM05D004053 ORTHO05D005065 8.5e-71 271.9 447 41.8
Nn1g02136 Nelumbo nucifera HOM05D004053 ORTHO05D005065 2.5e-70 270.4 411 43.3
Lj2A1179G44 Lonicera japonica HOM05D004053 ORTHO05D005065 9.4e-70 268.5 367 44.7
Actinidia00729 Actinidia chinensis HOM05D004053 ORTHO05D005065 1.3e-66 258.1 336 48.8
Lsat_1_v5_gn_5_187500 Lactuca sativa HOM05D004053 ORTHO05D005065 2.2e-66 257.3 452 41.4
ClCG07G000110 Citrullus lanatus HOM05D004053 ORTHO05D005065 1.1e-65 255.0 455 36.9
EL10Ac7g17207 Beta vulgaris HOM05D004053 ORTHO05D005065 1.8e-65 254.2 446 38.8
THA.LOC104801216 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 1.8e-65 254.2 456 37.9
CiPaw.08G102900 Carya illinoinensis HOM05D004053 ORTHO05D005065 2.9e-63 246.9 355 40.6
MELO3C014420.2 Cucumis melo HOM05D004053 ORTHO05D005065 3.8e-63 246.5 450 36.4
BraA03t12252Z Brassica rapa HOM05D004053 ORTHO05D005065 8.5e-63 245.4 451 36.8
THA.LOC104815946 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 8.5e-63 245.4 449 38.3
Sp6g02950 Schrenkiella parvula HOM05D004053 ORTHO05D005065 1.9e-62 244.2 450 36.0
Thhalv10028686m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 7.2e-62 242.3 450 36.7
CsaV3_6G036930 Cucumis sativus L. HOM05D004053 ORTHO05D005065 9.4e-62 241.9 450 36.0
CARHR251290 Cardamine hirsuta HOM05D004053 ORTHO05D005065 1.2e-61 241.5 451 36.1
AT4G02920 Arabidopsis thaliana HOM05D004053 ORTHO05D005065 4.7e-61 239.6 450 36.2
A03p30730 Brassica napus HOM05D004053 ORTHO05D005065 1.0e-60 238.4 449 36.5
BolC3t16035H Brassica oleracea HOM05D004053 ORTHO05D005065 1.4e-60 238.0 451 35.9
C03p37430 Brassica napus HOM05D004053 ORTHO05D005065 1.8e-60 237.7 451 35.9
Sc05g0005080 Simmondsia chinensis HOM05D004053 ORTHO05D005065 2.0e-59 234.2 447 36.0
VMungo1383G0556 Vigna mungo HOM05D004053 ORTHO05D005065 2.2e-58 230.7 445 35.5
Zm00001eb417790 Zea mays HOM05D004053 ORTHO05D005065 8.2e-58 228.8 393 37.7
PSO541G4889 Papaver somniferum HOM05D004053 ORTHO05D005065 4.1e-57 226.5 462 37.7
PSO675G9209 Papaver somniferum HOM05D004053 ORTHO05D005065 4.1e-57 226.5 463 36.9
Aa31LG5G2500 Aethionema arabicum HOM05D004053 ORTHO05D005065 2.0e-56 224.2 453 34.0
Oeu041712.1 Olea europaea HOM05D004053 ORTHO05D005065 2.6e-56 223.8 196 60.7
Carub.0006s3417 Capsella rubella HOM05D004053 ORTHO05D005065 7.7e-56 222.2 450 34.7
AL6G50010 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 2.9e-55 220.3 451 34.6
arahy.Tifrunner.gnm1.ann1.U9BU7H Arachis hypogaea HOM05D004053 ORTHO05D005065 3.2e-54 216.9 426 35.0
Os05g0143300 Oryza sativa ssp. japonica HOM05D004053 ORTHO05D005065 5.2e-52 209.5 388 36.6
BcaB01g02487 Brassica carinata HOM05D004053 ORTHO05D005065 2.8e-50 203.8 451 33.9
AUR62033710 Chenopodium quinoa HOM05D004053 ORTHO05D005065 3.7e-50 203.4 443 35.0
AUR62036816 Chenopodium quinoa HOM05D004053 ORTHO05D005065 1.1e-49 201.8 436 34.6
Sed0017907 Sechium edule HOM05D004053 ORTHO05D005065 1.1e-49 201.8 499 30.9
Carub.0001s0245 Capsella rubella HOM05D004053 ORTHO05D005065 2.0e-48 197.6 441 34.2
CDE05G2296 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 1.0e-47 195.3 287 42.9
CDE11G0853 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 1.0e-47 195.3 285 41.8
AL1G12850 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 1.6e-45 188.0 452 33.0
AT1G03340 Arabidopsis thaliana HOM05D004053 ORTHO05D005065 6.1e-45 186.0 443 32.3
TPR.G13395 Trifolium pratense HOM05D004053 ORTHO05D005065 1.2e-43 181.8 362 32.6
Thhalv10007898m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 3.4e-43 180.3 428 30.1
Sp1g02330 Schrenkiella parvula HOM05D004053 ORTHO05D005065 9.8e-43 178.7 396 33.1
MBI17_g34956_MAGBIO Magnolia biondii HOM05D004053 ORTHO05D005065 6.8e-36 156.0 310 35.8
unitig_8.g3318 Utricularia gibba HOM05D004053 ORTHO05D005065 7.5e-35 152.5 442 32.4
ATR0665G655 Amborella trichopoda HOM05D004053 ORTHO05D005065 2.2e-34 151.0 448 29.9
BcaC01g06723 Brassica carinata HOM05D004053 ORTHO05D005065 8.3e-34 149.1 171 46.8
BraA10t42462Z Brassica rapa HOM05D004053 ORTHO05D005065 1.8e-33 147.9 427 30.0
BcaC05g24539 Brassica carinata HOM05D004053 ORTHO05D005065 1.2e-29 135.2 174 43.1
A10p01890 Brassica napus HOM05D004053 ORTHO05D005065 1.8e-28 131.3 169 45.0
C02p39720 Brassica napus HOM05D004053 ORTHO05D005065 2.4e-25 120.9 176 40.9
BolC2t09985H Brassica oleracea HOM05D004053 ORTHO05D005065 7.0e-25 119.4 176 40.3
A02p25050 Brassica napus HOM05D004053 ORTHO05D005065 4.6e-24 116.7 172 40.7
BraA02t07493Z Brassica rapa HOM05D004053 ORTHO05D005065 4.6e-24 116.7 172 40.7
BcaC03g16190 Brassica carinata HOM05D004053 ORTHO05D005065 1.0e-23 115.5 167 40.7
arahy.Tifrunner.gnm1.ann1.F0KDF8 Arachis hypogaea HOM05D004053 ORTHO05D005065 7.3e-22 109.4 237 31.6
RcHm_v2.0_Chr6g0291831 Rosa chinensis HOM05D004053 ORTHO05D005065 5.2e-20 103.2 86 60.5
Hma1.2p1_4080F.1_g338240 Hydrangea macrophylla HOM05D004053 ORTHO05D005065 1.9e-17 94.7 128 45.3
SEGI_15237 Sequoiadendron giganteum HOM05D004053 ORTHO05D005065 4.1e-17 93.6 424 24.8
unitig_22.g6690 Utricularia gibba HOM05D004053 ORTHO05D005065 4.6e-16 90.1 286 32.2
arahy.Tifrunner.gnm1.ann1.LMB138 Arachis hypogaea HOM05D004053 ORTHO05D005065 1.2e-13 82.0 60 70.0
Psat1g163200 Pisum sativum HOM05D000871 ORTHO05D008698 2.3e-12 77.8 217 26.7
BcaC01g06721 Brassica carinata HOM05D004053 ORTHO05D005065 7.6e-11 72.8 124 37.9
BcaB04g19084 Brassica carinata HOM05D004053 ORTHO05D005065 1.2e-08 65.5 59 52.5
CARHR002650 Cardamine hirsuta HOM05D004053 ORTHO05D005065 1.7e-07 61.6 84 38.1
BcaB06g27908 Brassica carinata HOM05D000021 ORTHO05D000010 2.3e-07 61.2 71 45.1
C08p10690 Brassica napus HOM05D004053 ORTHO05D031745 6.6e-07 59.7 78 41.0
BolC8t48741H Brassica oleracea HOM05D004053 ORTHO05D031745 6.6e-07 59.7 78 41.0


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