Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001320g0090 Nicotiana tabacum HOM05D008538 ORTHO05D010142 4.3e-78 294.7 157 100.0
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 9.7e-62 240.4 185 73.0
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.3e-53 213.4 186 66.7
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 5.9e-43 177.9 185 57.3
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 3.8e-42 175.3 185 56.8
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 2.5e-41 172.6 185 56.2
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 2.2e-37 159.5 175 56.0
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.8e-36 156.4 175 55.4
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 3.2e-33 145.6 167 56.3
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 4.2e-33 145.2 189 51.3
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 1.6e-24 116.7 149 52.3
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 1.6e-19 100.1 89 62.9
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 3.3e-17 92.4 189 38.6
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 1.4e-15 87.0 194 35.6
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 4.0e-15 85.5 89 55.1
Nitab4.5_0003395g0040 Nicotiana tabacum HOM05D008538 ORTHO05D010142 3.4e-14 82.4 114 43.9
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 6.3e-13 78.2 189 36.0
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 2.4e-12 76.3 189 35.4
Lj8C159G11 Lonicera japonica HOM05D008538 ORTHO05D010142 1.6e-11 73.6 198 33.3
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 3.5e-11 72.4 89 50.6
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 7.3e-09 64.7 89 44.9
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 4.7e-08 62.0 90 46.7
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.7e-08 62.0 90 46.7
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.7e-08 62.0 90 46.7
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.0e-07 60.8 90 45.6
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 2.3e-07 59.7 132 34.1
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 5.2e-07 58.5 174 31.6
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 1.2e-06 57.4 161 34.2
HanXRQChr08g0234631 Helianthus annuus HOM05D008538 ORTHO05D010142 4.4e-06 55.5 158 32.3


User provided reference genes

Program Settings