Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.4e-119 433.0 221 100.0
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.0e-113 412.5 232 93.5
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.5e-100 369.8 232 86.6
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 3.1e-98 362.1 231 84.4
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 7.6e-97 357.5 230 83.0
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 2.3e-93 345.9 230 81.7
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.6e-83 313.2 228 75.0
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 5.3e-82 308.1 232 73.7
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 2.6e-81 305.8 233 75.1
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.3e-80 303.5 230 71.3
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 1.7e-80 303.1 228 73.2
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.7e-80 303.1 231 71.9
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 6.5e-80 301.2 228 73.7
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.4e-79 300.1 233 71.7
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.4e-79 300.1 241 69.7
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 5.5e-79 298.1 224 72.3
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 7.2e-79 297.7 235 70.2
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.2e-79 297.7 232 70.7
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.2e-79 297.7 232 70.7
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.2e-79 297.7 232 70.7
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 1.2e-78 297.0 232 72.4
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 1.6e-78 296.6 233 70.0
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 2.1e-78 296.2 234 70.9
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 6.1e-78 294.7 232 70.3
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.4e-77 293.5 239 69.0
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 3.0e-77 292.4 233 70.0
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 3.0e-77 292.4 234 70.1
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 3.9e-77 292.0 234 72.6
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 5.1e-77 291.6 232 68.1
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 6.7e-77 291.2 233 67.8
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 8.8e-77 290.8 232 67.7
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 8.8e-77 290.8 227 70.9
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.5e-76 290.0 235 67.7
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.5e-76 290.0 229 70.7
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.5e-76 290.0 232 67.7
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 2.0e-76 289.7 238 68.5
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.0e-76 289.7 233 67.4
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 2.6e-76 289.3 235 67.7
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 2.6e-76 289.3 221 74.2
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 3.3e-76 288.9 235 67.7
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 3.3e-76 288.9 231 67.1
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 3.3e-76 288.9 231 67.1
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 3.3e-76 288.9 230 71.7
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 4.3e-76 288.5 232 69.0
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.7e-75 286.6 237 68.8
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.2e-75 286.2 231 67.1
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.2e-75 286.2 231 67.1
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 3.7e-75 285.4 235 69.4
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 4.8e-75 285.0 235 66.4
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 4.8e-75 285.0 230 70.9
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 4.8e-75 285.0 230 67.4
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 2.4e-74 282.7 232 68.1
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 2.4e-74 282.7 230 65.7
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 3.1e-74 282.3 227 68.7
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.5e-73 280.0 266 60.2
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 1.5e-73 280.0 233 69.5
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 2.6e-73 279.3 234 68.4
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 5.9e-73 278.1 224 68.8
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 6.5e-72 274.6 228 68.0
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 8.5e-72 274.2 237 67.5
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.1e-71 273.9 234 65.8
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 9.4e-71 270.8 234 67.1
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.6e-70 270.0 225 65.3
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 2.7e-70 269.2 234 64.1
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.6e-70 268.9 234 65.0
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 7.9e-70 267.7 234 63.7
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.0e-69 267.3 233 63.1
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 3.0e-69 265.8 202 74.3
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 2.6e-68 262.7 184 74.5
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.7e-67 258.8 232 62.5
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 5.3e-66 255.0 236 62.3
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 7.0e-66 254.6 231 65.4
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.2e-65 253.8 202 66.8
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 1.2e-65 253.8 229 63.3
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 5.0e-64 248.4 225 64.4
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 5.5e-63 245.0 236 61.0
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 9.4e-63 244.2 235 60.0
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 8.0e-62 241.1 235 60.9
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.4e-61 240.4 223 63.7
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 1.4e-61 240.4 235 60.0
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.8e-61 240.0 241 57.3
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 1.8e-61 240.0 240 60.4
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.5e-60 236.9 193 62.7
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 7.5e-60 234.6 230 55.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 7.5e-60 234.6 231 58.9
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 3.1e-58 229.2 228 57.5
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 3.5e-57 225.7 221 57.9
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 5.9e-57 224.9 139 80.6
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.3e-56 223.8 227 56.4
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 6.5e-56 221.5 229 58.1
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.1e-55 220.7 159 73.0
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 4.2e-55 218.8 185 63.8
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 7.2e-55 218.0 225 57.8
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 2.1e-54 216.5 185 64.9
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 6.1e-54 214.9 161 67.1
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.0e-53 214.2 138 76.8
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.3e-51 207.2 140 75.7
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 3.6e-46 189.1 124 77.4
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.5e-44 183.7 222 50.9
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 6.1e-38 161.8 138 68.1
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 5.2e-37 158.7 95 82.1
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 6.8e-37 158.3 234 42.7
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 8.9e-37 157.9 141 63.8
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 8.9e-37 157.9 178 47.2
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 2.6e-36 156.4 192 46.4
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 7.5e-36 154.8 137 62.0
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.0e-33 146.7 177 44.1
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.0e-32 142.9 221 45.2
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.8e-29 133.7 212 38.2
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.2e-27 126.7 223 43.9
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 2.0e-25 120.2 160 41.9
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 3.2e-18 96.3 57 80.7
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 2.7e-17 93.2 87 70.1
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.5e-15 86.7 88 59.1
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 2.9e-11 73.2 203 26.6
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 1.0e-08 64.7 223 31.4
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 2.3e-08 63.5 139 27.3


User provided reference genes

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