Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.3e-190 668.7 334 100.0
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.7e-185 652.5 335 97.6
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 6.0e-170 600.9 334 89.2
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 3.9e-169 598.2 334 89.2
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 3.9e-169 598.2 334 88.9
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 6.8e-166 587.4 332 87.7
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.3e-161 572.4 334 85.3
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 6.1e-130 468.0 316 72.5
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 7.9e-130 467.6 321 72.0
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.3e-129 466.8 315 72.4
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.8e-129 466.5 316 72.2
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.9e-129 465.3 324 72.5
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 3.9e-129 465.3 315 72.4
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 5.1e-129 464.9 322 71.1
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 5.1e-129 464.9 322 72.4
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.1e-128 463.8 314 72.3
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.5e-128 462.6 316 71.8
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.3e-128 461.8 314 72.0
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 5.7e-128 461.5 320 70.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 5.7e-128 461.5 314 72.3
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 2.2e-127 459.5 320 71.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 2.2e-127 459.5 314 71.7
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.2e-127 459.5 314 71.7
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 6.3e-127 458.0 313 72.5
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.4e-126 456.1 315 72.1
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.9e-126 454.5 324 69.1
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.5e-125 453.4 314 70.7
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.5e-125 453.4 311 72.0
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 5.9e-125 451.4 318 69.2
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 2.2e-124 449.5 309 71.5
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.2e-124 449.5 320 69.7
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 3.8e-124 448.7 317 70.0
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.8e-124 448.7 310 71.3
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 8.5e-124 447.6 321 68.8
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 3.2e-123 445.7 316 69.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 5.5e-123 444.9 318 68.6
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 5.5e-123 444.9 318 68.2
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.1e-122 443.0 316 69.9
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.7e-122 442.6 318 68.2
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 3.6e-122 442.2 318 67.9
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 6.1e-122 441.4 339 66.1
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.1e-122 441.4 309 68.9
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 7.9e-122 441.0 318 67.9
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.4e-121 440.3 318 67.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.3e-121 439.5 321 67.9
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.5e-120 436.8 311 70.7
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.5e-120 436.0 323 67.8
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 4.3e-120 435.3 319 67.7
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 4.3e-120 435.3 319 67.7
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 4.3e-120 435.3 319 67.7
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 5.7e-120 434.9 310 69.4
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 9.7e-120 434.1 321 66.7
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.3e-119 433.7 321 68.5
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 4.8e-119 431.8 321 66.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.1e-118 430.6 321 66.4
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.4e-118 430.3 321 67.3
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.8e-118 429.9 314 64.6
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.8e-118 429.9 321 66.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 4.1e-118 428.7 322 66.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 5.3e-118 428.3 322 68.0
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.6e-117 426.0 309 68.0
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 7.7e-117 424.5 322 64.3
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 7.7e-117 424.5 309 67.3
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 7.7e-117 424.5 353 62.3
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.0e-116 424.1 321 65.7
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.2e-116 422.9 345 62.3
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 2.9e-116 422.5 310 63.9
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 5.0e-116 421.8 322 65.5
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 5.5e-115 418.3 288 69.8
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 7.2e-115 417.9 322 65.8
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 9.4e-115 417.5 314 65.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.1e-114 416.4 309 67.3
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 3.3e-112 409.1 268 75.4
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 3.3e-112 409.1 272 74.6
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 9.7e-112 407.5 344 59.9
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.3e-111 407.1 316 62.7
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.8e-110 403.3 312 62.2
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.4e-110 402.9 294 68.4
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.1e-110 402.5 337 61.7
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.1e-107 394.0 314 63.7
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 9.4e-107 391.0 309 64.7
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.6e-106 390.2 281 68.7
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 9.7e-104 380.9 322 60.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.9e-99 366.7 332 58.1
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.2e-95 353.2 254 69.7
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 8.3e-95 351.3 243 73.3
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.8e-94 350.1 250 70.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.8e-92 342.4 313 59.7
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 4.2e-91 339.0 324 55.9
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 5.2e-89 332.0 316 54.7
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 2.6e-88 329.7 309 53.1
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 3.4e-88 329.3 318 51.6
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 1.3e-87 327.4 310 52.3
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 4.9e-87 325.5 286 57.0
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.9e-84 316.2 311 49.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.1e-83 314.3 316 49.4
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.1e-83 314.3 316 49.4
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-79 300.8 310 48.4
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.9e-79 298.9 317 46.4
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-78 295.8 313 47.3
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-77 294.3 326 45.4
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-77 293.9 313 46.6
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 5.9e-77 292.0 222 63.5
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 2.1e-74 283.5 257 54.9
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 7.0e-70 268.5 328 43.6
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 2.5e-67 260.0 322 45.0
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 8.1e-66 255.0 312 46.8
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.8e-57 227.3 213 53.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.5e-32 144.4 139 53.2
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 8.1e-26 122.1 110 55.5
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-22 111.7 119 52.1
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 1.4e-06 58.2 40 65.0


User provided reference genes

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