Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001308g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.2e-46 187.6 88 100.0
Nitab4.5_0000021g0970 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.6e-27 123.2 69 78.3
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-26 122.9 69 79.7
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-26 121.7 68 80.9
Nitab4.5_0000044g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.4e-25 119.4 69 78.3
Nitab4.5_0001810g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.4e-25 119.4 68 77.9
Nitab4.5_0000228g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.1e-25 118.2 69 76.8
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.0e-25 117.9 69 78.3
Nitab4.5_0007137g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.0e-25 116.7 68 79.4
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-24 116.3 69 75.4
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-24 115.9 68 76.5
Nitab4.5_0004899g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000137 2.2e-23 112.1 69 75.4
Nitab4.5_0000482g0190 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.9e-23 111.7 71 70.4
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.9e-23 110.9 68 73.5
Nitab4.5_0000730g0150 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.1e-22 109.8 68 73.5
Nitab4.5_0000477g0180 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.4e-22 109.4 57 84.2
Nitab4.5_0000786g0250 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.6e-21 105.9 68 72.1
Nitab4.5_0001530g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.6e-21 105.9 57 84.2
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.6e-21 105.9 69 73.9
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-20 103.2 57 80.7
Nitab4.5_0000036g0370 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.3e-20 102.8 57 78.9
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-20 101.3 76 61.8
Nitab4.5_0003079g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.7e-20 100.5 57 78.9
Nitab4.5_0004196g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.9e-19 99.0 65 67.7
Nitab4.5_0000246g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.3e-19 97.8 68 66.2
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.3e-19 97.8 57 73.7
Nitab4.5_0011961g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-18 94.7 55 74.5
Nitab4.5_0000522g0050 Nicotiana tabacum HOM05D005063 ORTHO05D016873 2.0e-16 89.0 58 72.4
Nitab4.5_0014828g0010 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.6e-16 88.6 48 79.2
Nitab4.5_0002951g0080 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.5e-16 87.8 67 65.7
Nitab4.5_0000890g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.5e-15 83.6 49 75.5
Nitab4.5_0001927g0120 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.5e-15 83.6 43 86.0
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.4e-14 80.1 42 83.3
Nitab4.5_0011631g0010 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.4e-14 80.1 69 59.4
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-12 76.3 42 78.6
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-12 75.9 57 63.2
Nitab4.5_0003911g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.9e-12 74.7 47 68.1
Nitab4.5_0000008g0770 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.7e-10 69.3 42 73.8
Nitab4.5_0008736g0030 Nicotiana tabacum HOM05D034517 ORTHO05D010498 2.0e-08 62.4 36 72.2
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 5.0e-07 57.8 73 34.2
Nitab4.5_0004809g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-06 56.6 80 36.2
Nitab4.5_0000829g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-06 56.2 50 54.0
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.9e-06 55.8 74 35.1
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 2.5e-06 55.5 68 35.3
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 3.2e-06 55.1 68 33.8
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 3.2e-06 55.1 68 33.8
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 3.2e-06 55.1 68 33.8
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 3.2e-06 55.1 68 33.8


User provided reference genes

Program Settings