Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.1e-71 272.3 143 100.0
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.7e-42 175.6 124 79.8
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 6.6e-17 91.3 131 48.1
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 1.5e-16 90.1 99 47.5
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 2.8e-15 85.9 89 49.4
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 8.1e-15 84.3 67 55.2
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 2.3e-14 82.8 67 55.2
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 5.2e-14 81.6 63 58.7
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.5e-13 80.1 149 39.6
Sopen06g032370 Solanum pennellii HOM05D017346 ORTHO05D011266 4.4e-13 78.6 123 40.7
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 5.8e-13 78.2 82 51.2
Peaxi162Scf00679g00136 Petunia axillaris HOM05D008565 ORTHO05D011266 9.9e-13 77.4 66 54.5
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 9.9e-13 77.4 90 37.8
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 1.3e-12 77.0 90 45.6
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 1.3e-12 77.0 85 44.7
CAN.G394.27 Capsicum annuum HOM05D008565 ORTHO05D011266 2.2e-12 76.3 89 50.6
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 2.9e-12 75.9 83 49.4
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 6.4e-12 74.7 97 39.2
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 6.4e-12 74.7 72 44.4
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 6.4e-12 74.7 95 40.0
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 8.3e-12 74.3 92 39.1
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 1.4e-11 73.6 101 43.6
Sopen06g031830 Solanum pennellii HOM05D000012 ORTHO05D001652 4.1e-11 72.0 102 38.2
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 9.2e-11 70.9 81 43.2
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 1.6e-10 70.1 93 37.6
Solyc06g075430.3 Solanum lycopersicum HOM05D039704 ORTHO05D024760 2.1e-10 69.7 95 38.9
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 2.1e-10 69.7 79 45.6
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 4.6e-10 68.6 100 45.0
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 4.6e-10 68.6 86 39.5
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 6.0e-10 68.2 94 39.4
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 7.8e-10 67.8 78 39.7
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 7.8e-10 67.8 86 39.5
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.0e-09 67.4 95 37.9
CiPaw.14G071600 Carya illinoinensis HOM05D010595 ORTHO05D011290 1.3e-09 67.0 68 39.7
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 2.3e-09 66.2 92 43.5
Solyc06g075890.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 3.0e-09 65.9 95 37.9
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 3.0e-09 65.9 101 42.6
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 3.9e-09 65.5 105 40.0
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 5.1e-09 65.1 89 41.6
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 5.1e-09 65.1 97 36.1
PGSC0003DMG400045401 Solanum tuberosum HOM05D008565 ORTHO05D017126 6.6e-09 64.7 77 44.2
Solyc06g075860.3 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.5e-08 63.5 67 49.3
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 1.9e-08 63.2 89 40.4
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 7.3e-08 61.2 90 37.8
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 7.3e-08 61.2 90 37.8
CAN.G394.31 Capsicum annuum HOM05D008565 ORTHO05D011266 1.2e-07 60.5 96 38.5
Solyc06g075840.1 Solanum lycopersicum HOM05D017346 ORTHO05D024760 1.6e-07 60.1 93 35.5
Actinidia20728 Actinidia chinensis HOM05D000553 ORTHO05D000460 2.1e-07 59.7 69 34.8
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 2.1e-07 59.7 94 34.0
Oeu033600.1 Olea europaea HOM05D000553 ORTHO05D000460 2.8e-07 59.3 69 36.2
Sopen06g032100 Solanum pennellii HOM05D012723 ORTHO05D011266 2.8e-07 59.3 115 39.1
PGSC0003DMG400045349 Solanum tuberosum HOM05D008565 ORTHO05D011266 2.8e-07 59.3 47 57.4
Actinidia06500 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.6e-07 58.9 98 34.7
Solyc06g075870.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 4.7e-07 58.5 78 37.2
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 6.2e-07 58.2 70 38.6
PGSC0003DMG400040747 Solanum tuberosum HOM05D012723 ORTHO05D011266 6.2e-07 58.2 96 36.5
PGSC0003DMG400045046 Solanum tuberosum HOM05D008565 ORTHO05D017126 6.2e-07 58.2 86 34.9
Actinidia13931 Actinidia chinensis HOM05D000553 ORTHO05D000460 8.1e-07 57.8 85 32.9
Actinidia37222 Actinidia chinensis HOM05D010595 ORTHO05D011290 8.1e-07 57.8 69 33.3
CAN.G394.36 Capsicum annuum HOM05D012723 ORTHO05D011266 1.1e-06 57.4 100 35.0
Solyc06g075700.2 Solanum lycopersicum HOM05D012723 ORTHO05D011266 1.1e-06 57.4 114 29.8
Sopen06g032270 Solanum pennellii HOM05D017346 ORTHO05D024760 1.1e-06 57.4 92 33.7
Actinidia07052 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.4e-06 57.0 66 43.9
BcaB02g07672 Brassica carinata HOM05D000553 ORTHO05D000460 1.8e-06 56.6 85 30.6
Dinv23094 Davidia involucrata HOM05D000553 ORTHO05D000460 1.8e-06 56.6 64 34.4
PGR031G1061 Punica granatum HOM05D000553 ORTHO05D000460 1.8e-06 56.6 91 29.7
TAR636G2882 Trochodendron aralioides HOM05D000553 ORTHO05D000460 1.8e-06 56.6 86 31.4
Actinidia00942 Actinidia chinensis HOM05D000553 ORTHO05D000460 2.4e-06 56.2 73 34.2
CiPaw.14G071500 Carya illinoinensis HOM05D010595 ORTHO05D011290 2.4e-06 56.2 66 34.8
Peaxi162Scf00141g00334 Petunia axillaris HOM05D000553 ORTHO05D000460 2.4e-06 56.2 56 39.3
PGSC0003DMG400039648 Solanum tuberosum HOM05D008565 ORTHO05D017126 2.4e-06 56.2 86 36.0
TWI74G0106 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 2.4e-06 56.2 64 31.2
TAR636G2175 Trochodendron aralioides HOM05D000553 ORTHO05D000460 2.4e-06 56.2 65 35.4
GSVIVG01033969001 Vitis vinifera HOM05D000553 ORTHO05D000460 2.4e-06 56.2 86 31.4
Aa31LG5G18960 Aethionema arabicum HOM05D000553 ORTHO05D000460 3.1e-06 55.8 62 38.7
CAN.G213.19 Capsicum annuum HOM05D000553 ORTHO05D000460 3.1e-06 55.8 64 34.4
Ciclev10013102m.g Citrus clementina HOM05D000553 ORTHO05D000460 3.1e-06 55.8 64 31.2
Eucgr.J00225 Eucalyptus grandis HOM05D000553 ORTHO05D000460 3.1e-06 55.8 72 31.9
PSO339G0673 Papaver somniferum HOM05D000553 ORTHO05D000460 3.1e-06 55.8 86 26.7
PSO801G0637 Papaver somniferum HOM05D000553 ORTHO05D000460 3.1e-06 55.8 86 26.7
Peaxi162Scf00679g00129 Petunia axillaris HOM05D044200 ORTHO05D011266 3.1e-06 55.8 84 42.9
Peaxi162Scf00679g00135 Petunia axillaris HOM05D044200 ORTHO05D011266 3.1e-06 55.8 83 56.6
Rhsim05G0213800 Rhododendron simsii HOM05D000553 ORTHO05D000460 3.1e-06 55.8 69 31.9
Aqoxy2G00922 Aquilegia oxysepala HOM05D000553 ORTHO05D000460 4.0e-06 55.5 92 31.5
A07p22700 Brassica napus HOM05D000553 ORTHO05D000460 4.0e-06 55.5 99 29.3
CSS0025442 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 4.0e-06 55.5 63 36.5
Cfa017215 Carpinus fangiana HOM05D000553 ORTHO05D000460 4.0e-06 55.5 64 34.4
CiPaw.01G249500 Carya illinoinensis HOM05D000553 ORTHO05D000460 4.0e-06 55.5 64 35.9
Thhalv10010822m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 4.0e-06 55.5 85 31.8
MBI05_g34497_MAGBIO Magnolia biondii HOM05D000553 ORTHO05D000460 4.0e-06 55.5 86 33.7
Manes.08G091500 Manihot esculenta HOM05D000553 ORTHO05D000460 4.0e-06 55.5 64 32.8
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 4.0e-06 55.5 105 34.3
BcaB01g00051 Brassica carinata HOM05D000553 ORTHO05D000460 5.2e-06 55.1 88 28.4
CARHR083330 Cardamine hirsuta HOM05D000553 ORTHO05D000460 5.2e-06 55.1 84 31.0
CiPaw.09G208400 Carya illinoinensis HOM05D000553 ORTHO05D000460 5.2e-06 55.1 64 34.4
CDE02G4112 Ceratophyllum demersum HOM05D000553 ORTHO05D000460 5.2e-06 55.1 98 32.7
AUR62033411 Chenopodium quinoa HOM05D000553 ORTHO05D000460 5.2e-06 55.1 65 35.4
Peaxi162Scf00014g00053 Petunia axillaris HOM05D000553 ORTHO05D000460 5.2e-06 55.1 69 31.9
PGSC0003DMG400039276 Solanum tuberosum HOM05D001388 ORTHO05D001234 5.2e-06 55.1 64 37.5
Atru.chr8.2225 Acer truncatum HOM05D000553 ORTHO05D000460 6.8e-06 54.7 64 32.8
CSS0015883 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 6.8e-06 54.7 64 34.4
CSS0021801 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D001663 6.8e-06 54.7 78 30.8
CDE04G0477 Ceratophyllum demersum HOM05D000553 ORTHO05D000460 6.8e-06 54.7 98 31.6
Ciclev10033070m.g Citrus clementina HOM05D000553 ORTHO05D000460 6.8e-06 54.7 63 36.5
Gohir.A09G164600 Gossypium hirsutum HOM05D000553 ORTHO05D000460 6.8e-06 54.7 64 31.2
Lsat_1_v5_gn_9_33821 Lactuca sativa HOM05D000553 ORTHO05D000460 6.8e-06 54.7 64 32.8
Sp5g06610 Schrenkiella parvula HOM05D000553 ORTHO05D000460 6.8e-06 54.7 70 30.0
Solyc06g075900.1 Solanum lycopersicum HOM05D035698 ORTHO05D011266 6.8e-06 54.7 90 37.8
TWI63G1511 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 6.8e-06 54.7 64 35.9
arahy.Tifrunner.gnm1.ann1.F9T2J1 Arachis hypogaea HOM05D000553 ORTHO05D000460 8.9e-06 54.3 66 31.8
Cpa.g.sc19.186 Carica papaya HOM05D000553 ORTHO05D000460 8.9e-06 54.3 63 34.9
MELO3C003239.2 Cucumis melo HOM05D000553 ORTHO05D000460 8.9e-06 54.3 64 31.2
CsaV3_4G026110 Cucumis sativus L. HOM05D000553 ORTHO05D000460 8.9e-06 54.3 64 31.2
Migut.F00676 Erythranthe guttata HOM05D000553 ORTHO05D000460 8.9e-06 54.3 81 33.3
Gohir.D09G160200 Gossypium hirsutum HOM05D000553 ORTHO05D000460 8.9e-06 54.3 64 31.2
Gorai.006G181800 Gossypium raimondii HOM05D000553 ORTHO05D000460 8.9e-06 54.3 64 31.2
HanXRQChr10g0293791 Helianthus annuus HOM05D000553 ORTHO05D000460 8.9e-06 54.3 64 32.8
PGSC0003DMG400019124 Solanum tuberosum HOM05D000553 ORTHO05D000460 8.9e-06 54.3 69 33.3
THA.LOC104816207 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 8.9e-06 54.3 59 35.6
TAR633G2493 Trochodendron aralioides HOM05D000553 ORTHO05D000460 8.9e-06 54.3 63 33.3
HPP92_015496 Vanilla planifolia HOM05D000553 ORTHO05D000460 8.9e-06 54.3 90 28.9


User provided reference genes

Program Settings