Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001290g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.2e-68 260.4 126 100.0
Nitab4.5_0004725g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-24 116.7 65 84.6
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-18 97.1 101 56.4
CAN.G575.77 Capsicum annuum HOM05D000007 ORTHO05D000017 2.6e-17 92.4 66 66.7
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 7.6e-17 90.9 66 66.7
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-16 90.1 66 66.7
CAN.G2702.1 Capsicum annuum HOM05D000007 ORTHO05D000017 6.4e-16 87.8 104 51.0
PGSC0003DMG400027935 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-15 85.5 67 62.7
Nitab4.5_0004725g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.7e-14 82.4 80 58.8
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.5e-14 82.0 93 50.5
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 4.6e-14 81.6 65 61.5
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 7.9e-14 80.9 153 40.5
CAN.G321.65 Capsicum annuum HOM05D000007 ORTHO05D000017 1.7e-13 79.7 82 51.2
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 2.3e-13 79.3 67 62.7
Nitab4.5_0001450g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.3e-13 79.3 77 57.1
Nitab4.5_0004725g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.0e-13 79.0 66 59.1
Nitab4.5_0000874g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.1e-13 78.2 62 64.5
CAN.G1579.17 Capsicum annuum HOM05D000007 ORTHO05D000017 6.6e-13 77.8 68 63.2
CAN.G2075.8 Capsicum annuum HOM05D000007 ORTHO05D011633 6.6e-13 77.8 68 63.2
CAN.G575.119 Capsicum annuum HOM05D000007 ORTHO05D000017 8.7e-13 77.4 54 68.5
CAN.G575.120 Capsicum annuum HOM05D000007 ORTHO05D000017 8.7e-13 77.4 66 63.6
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-12 77.0 60 65.0
PGSC0003DMG400013291 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-12 77.0 70 57.1
CAN.G2075.9 Capsicum annuum HOM05D000007 ORTHO05D000017 4.3e-12 75.1 66 62.1
CAN.G484.2 Capsicum annuum HOM05D000007 ORTHO05D000017 4.3e-12 75.1 61 65.6
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.6e-12 73.9 93 45.2
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-11 73.6 54 68.5
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-11 73.6 61 63.9
CAN.G884.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-11 73.6 112 46.4
CAN.G575.76 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-11 73.2 65 63.1
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-11 73.2 56 64.3
CAN.G575.138 Capsicum annuum HOM05D000007 ORTHO05D000017 2.1e-11 72.8 71 56.3
Nitab4.5_0002499g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-11 72.4 96 46.9
CAN.G206.121 Capsicum annuum HOM05D000007 ORTHO05D000017 3.6e-11 72.0 60 61.7
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.6e-11 72.0 61 62.3
CAN.G1565.5 Capsicum annuum HOM05D000007 ORTHO05D000017 4.8e-11 71.6 68 58.8
Nitab4.5_0006683g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.8e-11 71.6 97 45.4
Solyc11g012550.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 6.2e-11 71.2 77 50.6
PGSC0003DMG400010705 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.2e-11 71.2 75 54.7
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-11 70.9 80 51.2
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.1e-11 70.9 58 63.8
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-10 70.5 65 61.5
Nitab4.5_0017036g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-10 70.1 78 53.8
CAN.G1799.2 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-10 69.7 60 63.3
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 4.0e-10 68.6 80 47.5
Nitab4.5_0001659g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.0e-10 68.6 51 62.7
CAN.G696.5 Capsicum annuum HOM05D001580 ORTHO05D000017 5.3e-10 68.2 61 62.3
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 9.0e-10 67.4 89 44.9
Sopen11g007270 Solanum pennellii HOM05D000007 ORTHO05D000017 9.0e-10 67.4 64 53.1
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.2e-09 67.0 62 53.2
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 2.0e-09 66.2 70 50.0
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.0e-09 66.2 57 59.6
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 2.6e-09 65.9 92 42.4
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-09 65.9 87 44.8
PGSC0003DMG400037258 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.4e-09 65.5 60 58.3
Nitab4.5_0002499g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.6e-09 64.3 62 58.1
Solyc11g012540.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.6e-09 64.3 64 53.1
Solyc11g012560.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.6e-09 64.3 70 48.6
PGSC0003DMG400028421 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.9e-09 63.9 71 45.1
CAN.G1375.10 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-08 63.5 76 47.4
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.3e-08 63.5 86 46.5
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-08 62.8 80 48.8
CAN.G644.29 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-08 62.8 90 43.3
Nitab4.5_0000856g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.2e-08 62.8 59 64.4
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.9e-08 62.4 63 58.7
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.9e-08 62.4 78 47.4
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.9e-08 61.6 78 47.4
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.4e-08 61.2 63 52.4
CAN.G1209.1 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-08 60.8 145 37.2
CAN.G1374.17 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 121 36.4
CAN.G1470.6 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 80 48.8
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 57 59.6
Nitab4.5_0001728g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 44 65.9
CAN.G1557.16 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-07 60.1 71 52.1
Nitab4.5_0000334g0270 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-07 60.1 62 56.5
PGSC0003DMG400014896 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-07 60.1 61 54.1
CAN.G1186.26 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 61 59.0
Nitab4.5_0015235g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 56 53.6
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 63 54.0
PGSC0003DMG400034923 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 61 55.7
CAN.G1156.5 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 59.3 61 57.4
CAN.G473.137 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 59.3 89 38.2
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 59.3 57 57.9
CAN.G520.23 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 59.3 61 57.4
CAN.G786.31 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 59.3 68 51.5
PGSC0003DMG400036420 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-07 58.9 91 42.9
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-07 58.5 77 45.5
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.2e-07 58.5 87 46.0
PGSC0003DMG400042553 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.2e-07 58.5 83 47.0
CAN.G1227.3 Capsicum annuum HOM05D000185 ORTHO05D000017 5.5e-07 58.2 65 50.8
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 5.5e-07 58.2 61 52.5
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 5.5e-07 58.2 61 52.5
PGSC0003DMG400025404 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.5e-07 58.2 63 54.0
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.1e-07 57.8 63 50.8
CAN.G320.13 Capsicum annuum HOM05D000007 ORTHO05D000017 9.3e-07 57.4 74 47.3
CAN.G473.136 Capsicum annuum HOM05D000007 ORTHO05D000017 9.3e-07 57.4 84 44.0
Lj3C809T2 Lonicera japonica HOM05D000007 ORTHO05D000017 9.3e-07 57.4 50 48.0
CAN.G222.158 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 56 55.4
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 61 54.1
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 63 50.8
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.6e-06 56.6 70 44.3
RcHm_v2.0_Chr2g0154671 Rosa chinensis HOM05D000007 ORTHO05D000017 1.6e-06 56.6 77 40.3
CAN.G1134.16 Capsicum annuum HOM05D020669 ORTHO05D015553 2.1e-06 56.2 59 52.5
CAN.G1344.10 Capsicum annuum HOM05D000007 ORTHO05D000017 2.1e-06 56.2 65 49.2
Nitab4.5_0005858g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.1e-06 56.2 75 45.3
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 2.1e-06 56.2 71 47.9
Nitab4.5_0001036g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.7e-06 55.8 61 50.8
PGSC0003DMG401013254 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.7e-06 55.8 60 51.7
RcHm_v2.0_Chr5g0030551 Rosa chinensis HOM05D000007 ORTHO05D000017 3.5e-06 55.5 49 51.0
Nitab4.5_0002499g0150 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.6e-06 55.1 80 43.8
PGSC0003DMG400021641 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.6e-06 55.1 84 46.4
PGSC0003DMG400042854 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.6e-06 55.1 90 38.9
CAN.G1134.13 Capsicum annuum HOM05D000176 ORTHO05D000017 6.0e-06 54.7 59 50.8
CAN.G1186.44 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-06 54.7 63 54.0
Nitab4.5_0002499g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.0e-06 54.7 70 44.3
CAN.G222.159 Capsicum annuum HOM05D000007 ORTHO05D000017 7.9e-06 54.3 54 55.6


User provided reference genes

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