Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 0.0e+00 1232.2 595 100.0
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.8e-310 1068.5 595 88.1
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 2.0e-237 825.9 606 71.0
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 1.4e-230 803.1 608 69.2
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 1.1e-227 793.5 608 68.6
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 8.3e-223 777.3 607 67.7
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 4.1e-206 721.8 591 65.0
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 2.6e-152 543.1 603 47.4
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 3.8e-151 539.3 601 47.9
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 6.3e-146 521.9 573 48.5
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 1.8e-145 520.4 596 45.5
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.7e-143 513.8 597 46.1
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 6.5e-143 511.9 596 46.0
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 3.6e-141 506.1 606 45.4
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.5e-136 489.2 639 44.9
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.2e-131 474.6 595 45.2
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.3e-127 461.1 619 42.3
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 2.7e-125 453.4 594 42.8
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 6.1e-125 452.2 618 43.4
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.8e-124 450.7 619 42.6
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 2.0e-123 447.2 598 42.5
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 5.4e-121 439.1 611 42.7
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 5.4e-121 439.1 606 42.7
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 2.7e-120 436.8 608 42.4
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 2.3e-119 433.7 614 41.0
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 5.0e-119 432.6 603 41.3
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.1e-118 431.4 625 39.5
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.9e-118 430.6 600 39.5
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.3e-118 429.5 612 40.4
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 5.6e-118 429.1 596 41.4
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 8.0e-117 425.2 612 43.1
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.0e-117 425.2 600 40.2
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 6.8e-116 422.2 595 39.5
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 1.2e-115 421.4 604 40.1
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.2e-115 421.4 599 40.7
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 1.5e-115 421.0 608 40.6
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 2.0e-115 420.6 612 40.7
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 9.8e-115 418.3 599 39.9
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.3e-114 417.9 591 39.9
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.7e-114 417.5 599 40.6
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 7.0e-113 412.1 603 39.1
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 3.5e-112 409.8 618 40.1
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 4.6e-112 409.5 609 39.2
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 4.6e-112 409.5 611 40.1
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.3e-111 407.9 606 39.4
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 2.3e-111 407.1 597 42.0
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 2.3e-111 407.1 604 41.4
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 8.6e-111 405.2 507 44.0
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.9e-110 404.1 520 43.8
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 4.3e-110 402.9 610 39.3
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.8e-108 397.5 604 38.1
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 3.1e-108 396.7 600 39.5
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.0e-108 396.4 601 38.9
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 4.0e-108 396.4 601 38.8
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 4.0e-108 396.4 617 38.7
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 4.4e-107 392.9 605 37.7
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.7e-106 391.0 595 39.3
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.1e-105 388.3 604 38.1
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 2.4e-105 387.1 610 37.7
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 5.4e-105 386.0 611 38.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 7.0e-105 385.6 632 37.2
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 9.2e-105 385.2 611 38.0
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 9.2e-105 385.2 613 37.8
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 1.6e-104 384.4 600 38.7
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 7.8e-104 382.1 593 37.9
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 8.6e-103 378.6 642 37.4
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.5e-102 377.1 465 44.3
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 3.3e-102 376.7 624 37.3
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 1.2e-101 374.8 605 37.2
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.8e-100 370.9 614 37.0
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 3.1e-100 370.2 616 36.7
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 3.1e-100 370.2 606 38.4
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 5.2e-100 369.4 604 37.7
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 7.1e-97 359.0 616 36.7
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.2e-96 358.2 598 36.0
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 3.9e-95 353.2 593 36.6
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 4.3e-94 349.7 592 36.1
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 7.3e-94 349.0 596 36.2
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.8e-93 347.1 595 36.5
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 2.8e-93 347.1 596 36.2
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 8.1e-93 345.5 600 36.0
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.1e-92 345.1 602 36.2
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 1.4e-92 344.7 596 36.1
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 2.3e-92 344.0 600 37.0
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 2.3e-92 344.0 600 37.0
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.4e-91 340.1 601 34.8
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 7.8e-88 328.9 434 41.9
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 3.0e-87 327.0 590 35.8
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.5e-83 314.7 615 34.5
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 9.3e-81 305.4 612 33.3
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 3.1e-76 290.4 450 38.2
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 4.0e-76 290.0 566 35.0
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 5.8e-75 286.2 356 43.3
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 2.7e-72 277.3 444 36.5
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.5e-72 276.9 474 38.0
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.6e-69 268.1 467 35.5
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.4e-68 265.0 450 35.3
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 7.9e-64 249.2 448 35.3
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.0e-55 222.2 219 50.7
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 2.4e-52 211.1 625 27.7
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 8.2e-45 186.0 264 38.6
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 2.6e-43 181.0 629 25.9
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 5.5e-41 173.3 521 28.0
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.4e-39 168.7 212 44.8
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 7.2e-33 146.4 166 47.0
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 2.7e-32 144.4 134 52.2
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.0e-26 123.6 161 44.1
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.6e-24 117.5 145 44.8
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.8e-23 115.2 346 27.2
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 4.0e-23 114.0 151 41.7
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.6e-22 111.3 507 22.3
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 4.1e-20 104.0 148 39.9
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 5.0e-18 97.1 124 41.9
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 6.5e-18 96.7 215 31.6
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 2.5e-09 68.2 75 46.7
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.5e-09 68.2 83 41.0
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.2e-09 67.8 80 46.2
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 9.8e-06 56.2 78 29.5


User provided reference genes

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