Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 4.3e-118 427.9 207 100.0
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 3.1e-84 315.5 207 77.3
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 4.5e-75 285.0 206 70.4
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.6e-72 276.6 208 69.2
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 4.7e-72 275.0 208 69.2
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.8e-71 273.1 207 68.6
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 1.6e-56 223.4 207 56.5
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 2.0e-54 216.5 200 57.5
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.6e-54 216.1 162 67.3
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 3.4e-54 215.7 210 55.7
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.8e-53 212.6 195 55.9
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 3.7e-53 212.2 198 57.1
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 3.1e-52 209.1 208 53.4
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 4.1e-52 208.8 202 54.5
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 1.2e-51 207.2 172 61.0
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 2.0e-51 206.5 181 60.2
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 4.5e-51 205.3 159 62.9
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 5.9e-51 204.9 162 63.6
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 7.7e-51 204.5 205 55.1
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.5e-49 200.3 163 61.3
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.5e-49 200.3 163 61.3
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.9e-49 199.9 181 59.1
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 4.2e-49 198.7 202 53.0
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 7.2e-49 198.0 165 58.8
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 9.5e-49 197.6 170 59.4
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 1.2e-48 197.2 164 59.1
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.2e-48 197.2 198 53.5
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.2e-48 197.2 186 57.0
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.6e-48 195.7 165 58.8
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 4.7e-48 195.3 153 63.4
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 4.7e-48 195.3 182 52.7
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 6.1e-48 194.9 182 52.2
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 6.1e-48 194.9 187 58.8
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 8.0e-48 194.5 182 52.2
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 8.0e-48 194.5 236 48.7
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.0e-47 194.1 188 52.7
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.0e-47 194.1 182 56.6
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.4e-47 193.7 155 63.2
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.8e-47 193.4 182 52.7
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.3e-47 193.0 154 62.3
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 4.0e-47 192.2 171 61.4
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 4.0e-47 192.2 170 57.6
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 5.2e-47 191.8 182 52.2
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 1.5e-46 190.3 153 61.4
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 1.5e-46 190.3 190 53.2
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.5e-46 190.3 168 58.3
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 2.0e-46 189.9 182 51.6
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 3.4e-46 189.1 160 59.4
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 5.7e-46 188.3 162 58.6
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 7.5e-46 188.0 182 51.6
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.3e-45 187.2 154 61.0
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.7e-45 186.8 170 57.6
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.7e-45 186.8 171 57.3
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 2.2e-45 186.4 159 59.1
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 2.2e-45 186.4 136 69.1
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 3.7e-45 185.7 167 58.7
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 6.3e-45 184.9 155 60.0
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 6.3e-45 184.9 166 59.0
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 8.3e-45 184.5 163 60.1
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.1e-44 184.1 179 52.5
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.1e-44 184.1 179 52.5
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.1e-44 184.1 189 52.4
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.4e-44 183.7 191 55.0
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.8e-44 183.3 167 58.1
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 5.4e-44 181.8 172 55.8
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.2e-43 180.6 175 54.9
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.6e-43 180.3 186 52.2
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 2.0e-43 179.9 153 61.4
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.0e-43 179.9 163 56.4
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.7e-43 179.5 180 53.9
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 5.9e-43 178.3 189 49.7
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 7.8e-43 177.9 182 51.1
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.0e-42 177.6 161 55.3
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.0e-42 177.6 179 52.0
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 2.3e-42 176.4 170 52.4
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 3.8e-42 175.6 177 55.9
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.6e-40 170.2 141 63.1
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 4.7e-40 168.7 162 54.9
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.4e-39 167.2 130 63.8
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.8e-39 166.8 160 55.6
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.8e-39 166.8 154 54.5
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 3.0e-39 166.0 156 52.6
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 2.0e-38 163.3 131 62.6
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 4.9e-37 158.7 161 49.7
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 7.0e-36 154.8 131 57.3
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 2.0e-35 153.3 126 57.1
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 3.0e-34 149.4 208 40.9
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 8.9e-31 137.9 133 54.1
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.2e-30 137.5 144 48.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.5e-30 137.1 160 46.2
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.9e-29 132.9 220 35.9
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.4e-28 130.6 132 52.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.9e-28 130.2 178 41.6
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 7.0e-28 128.3 130 47.7
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.7e-27 126.3 118 50.0
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.5e-25 120.6 162 42.6
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 1.6e-24 117.1 59 83.1
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 2.8e-24 116.3 120 46.7
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 5.2e-23 112.1 141 47.5
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.2e-16 90.9 92 52.2
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.2e-16 90.9 124 43.5
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 2.8e-16 89.7 113 38.1
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 3.6e-16 89.4 113 37.2
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.8e-15 87.0 168 41.1
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 4.0e-15 85.9 74 59.5
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 3.2e-12 76.3 113 36.3


User provided reference genes

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