Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.0e-128 463.4 229 100.0
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.0e-83 313.9 220 75.0
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.8e-77 293.1 239 64.4
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 9.1e-77 290.8 239 64.0
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 4.5e-76 288.5 241 64.7
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.3e-75 287.0 236 63.1
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 2.8e-62 242.7 218 59.6
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.2e-57 227.3 252 50.8
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.6e-57 226.9 250 50.8
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 5.7e-55 218.4 247 50.6
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.3e-54 217.2 242 51.7
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 5.9e-52 208.4 244 50.0
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 2.7e-44 183.0 271 41.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 2.5e-42 176.4 247 43.7
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 6.4e-38 161.8 268 40.7
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 7.0e-37 158.3 260 38.8
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 2.7e-36 156.4 274 39.1
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 3.3e-34 149.4 248 38.3
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 4.7e-33 145.6 226 39.8
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 2.2e-30 136.7 208 37.5
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 8.3e-30 134.8 254 35.4
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 1.9e-29 133.7 232 36.2
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 7.1e-29 131.7 214 41.1
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 9.2e-29 131.3 212 40.1
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 7.8e-28 128.3 226 38.9
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 6.6e-27 125.2 224 34.8
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.9e-26 123.6 223 39.9
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 4.3e-26 122.5 224 38.8
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 9.5e-26 121.3 253 33.2
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.2e-25 120.9 223 38.6
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 2.1e-25 120.2 238 35.7
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 3.6e-25 119.4 220 40.5
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.1e-24 117.9 115 51.3
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.4e-24 117.5 241 34.0
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.3e-24 116.7 236 35.6
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 2.3e-24 116.7 241 33.2
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 5.2e-24 115.5 246 34.6
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.2e-24 115.5 241 33.6
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 8.9e-24 114.8 231 34.6
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.2e-23 114.4 240 32.9
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.6e-23 113.2 240 32.9
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.4e-23 112.5 241 32.8
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 1.3e-22 110.9 239 32.6
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 1.3e-22 110.9 230 34.3
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 1.7e-22 110.5 88 59.1
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 2.2e-22 110.2 223 33.6
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 3.7e-22 109.4 243 33.3
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 3.7e-22 109.4 205 38.0
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.1e-21 107.8 229 36.2
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 5.4e-21 105.5 238 34.9
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 5.4e-21 105.5 116 50.9
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.1e-21 105.1 266 32.3
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 2.1e-20 103.6 135 40.7
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 2.7e-20 103.2 209 35.4
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 3.5e-20 102.8 254 31.5
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 4.6e-20 102.4 242 31.8
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 6.0e-20 102.1 207 35.3
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 1.0e-19 101.3 222 32.9
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 1.0e-19 101.3 225 33.3
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 3.0e-19 99.8 238 34.0
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 5.1e-19 99.0 243 32.5
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 5.1e-19 99.0 240 33.8
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 3.3e-18 96.3 252 31.3
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 5.6e-18 95.5 100 45.0
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 7.3e-18 95.1 216 30.1
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 2.8e-17 93.2 219 31.1
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 8.1e-17 91.7 99 49.5
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-16 91.3 244 31.1
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 1.4e-16 90.9 210 33.3
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.4e-16 90.1 99 49.5
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 2.4e-16 90.1 93 50.5
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 4.0e-16 89.4 244 31.6
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 5.2e-16 89.0 213 31.0
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 5.2e-16 89.0 249 29.3
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 2.0e-15 87.0 243 29.2
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 2.0e-15 87.0 249 28.9
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.3e-14 84.3 227 30.0
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 2.9e-14 83.2 211 31.3
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 3.8e-14 82.8 92 45.7
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 6.4e-14 82.0 222 27.9
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.4e-13 80.9 229 29.7
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 3.2e-13 79.7 233 28.3
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 5.4e-13 79.0 93 46.2
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.2e-12 77.8 93 45.2
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 1.6e-12 77.4 99 43.4
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 4.6e-12 75.9 107 41.1
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 6.0e-12 75.5 251 29.1
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 1.0e-11 74.7 93 44.1
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.7e-11 73.9 108 44.4
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 1.7e-11 73.9 227 26.4
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 2.3e-11 73.6 224 26.3
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 3.0e-11 73.2 98 39.8
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 5.1e-11 72.4 105 40.0
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 8.7e-11 71.6 98 40.8
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 5.6e-10 68.9 214 30.8
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.6e-10 68.9 54 57.4
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.6e-09 67.4 79 41.8
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 8.1e-09 65.1 94 33.0
Sc20g0006720 Simmondsia chinensis HOM05D007097 ORTHO05D008131 8.1e-09 65.1 212 24.5
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 2.4e-08 63.5 224 26.3
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 3.1e-08 63.2 98 35.7
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 3.1e-08 63.2 241 26.1
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 1.2e-07 61.2 235 21.7
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 2.2e-06 57.0 197 28.4
Nn3g18010 Nelumbo nucifera HOM05D007097 ORTHO05D008131 6.4e-06 55.5 70 45.7


User provided reference genes

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