Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001273g0070 Nicotiana tabacum HOM05D003427 ORTHO05D003927 2.3e-145 518.8 252 100.0
Solyc11g013120.2 Solanum lycopersicum HOM05D003427 ORTHO05D003927 2.2e-55 219.9 277 48.0
Nitab4.5_0006276g0030 Nicotiana tabacum HOM05D003427 ORTHO05D003927 8.2e-55 218.0 277 48.4
Sopen11g008180 Solanum pennellii HOM05D003427 ORTHO05D003927 1.1e-54 217.6 276 47.1
PGSC0003DMG400012073 Solanum tuberosum HOM05D003427 ORTHO05D003927 1.4e-54 217.2 277 46.9
Peaxi162Scf00402g00076 Petunia axillaris HOM05D003427 ORTHO05D003927 4.1e-54 215.7 277 47.3
CAN.G134.189 Capsicum annuum HOM05D003427 ORTHO05D003927 2.2e-52 209.9 277 45.1
Lj4A597T12 Lonicera japonica HOM05D003427 ORTHO05D003927 1.8e-38 163.7 271 39.9
Dinv27352 Davidia involucrata HOM05D003427 ORTHO05D003927 4.1e-38 162.5 273 37.4
Cfa015981 Carpinus fangiana HOM05D003427 ORTHO05D003927 5.4e-38 162.2 275 39.3
Atru.chr13.1391 Acer truncatum HOM05D003427 ORTHO05D003927 7.0e-38 161.8 273 38.1
TWI56G0570 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 1.6e-37 160.6 277 35.7
Hma1.2p1_0523F.1_g172050 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 2.7e-37 159.8 273 38.8
Lalb_Chr11g0065761 Lupinus albus HOM05D003427 ORTHO05D003927 2.7e-37 159.8 276 36.6
TAR381G1219 Trochodendron aralioides HOM05D003427 ORTHO05D003927 4.5e-37 159.1 279 37.6
Phvul.009G122400 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 1.3e-36 157.5 276 36.2
Nn5g28144 Nelumbo nucifera HOM05D003427 ORTHO05D003927 1.7e-36 157.1 277 37.9
Actinidia23060 Actinidia chinensis HOM05D003427 ORTHO05D003927 2.3e-36 156.8 277 37.5
Prupe.1G502900 Prunus persica HOM05D003427 ORTHO05D003927 2.9e-36 156.4 276 37.3
GSVIVG01008915001 Vitis vinifera HOM05D003427 ORTHO05D003927 3.8e-36 156.0 274 38.3
Haze_00493 Corylus avellana HOM05D003427 ORTHO05D003927 5.0e-36 155.6 275 38.5
FvH4_2g13600 Fragaria vesca HOM05D003427 ORTHO05D003927 8.6e-36 154.8 272 36.8
FAN24G2318 Fragaria x ananassa HOM05D003427 ORTHO05D003927 8.6e-36 154.8 272 36.8
MD15G1354500 Malus domestica HOM05D003427 ORTHO05D003927 1.1e-35 154.5 277 37.5
TWI12G1192 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 1.1e-35 154.5 277 35.4
Hund16838 Selenicereus undatus HOM05D003427 ORTHO05D003927 1.5e-35 154.1 272 37.1
AUR62023631 Chenopodium quinoa HOM05D003427 ORTHO05D003927 1.9e-35 153.7 275 36.0
AUR62036406 Chenopodium quinoa HOM05D003427 ORTHO05D003927 1.9e-35 153.7 275 36.0
Sabra05G0131500 Salix brachista HOM05D003427 ORTHO05D003927 2.5e-35 153.3 277 36.8
CiPaw.05G226400 Carya illinoinensis HOM05D003427 ORTHO05D003927 4.2e-35 152.5 275 35.3
FAN15G0544 Fragaria x ananassa HOM05D003427 ORTHO05D003927 5.5e-35 152.1 272 35.7
CSS0044236 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 7.2e-35 151.8 278 34.5
AUR62036452 Chenopodium quinoa HOM05D003427 ORTHO05D003927 7.2e-35 151.8 275 35.6
MD05G1028200 Malus domestica HOM05D003427 ORTHO05D003927 9.5e-35 151.4 277 37.2
Potri.005G174600 Populus trichocarpa HOM05D003427 ORTHO05D003927 9.5e-35 151.4 277 36.5
Hund16834 Selenicereus undatus HOM05D003427 ORTHO05D003927 9.5e-35 151.4 271 36.5
TWI74G0994 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 9.5e-35 151.4 273 35.5
TAR381G0480 Trochodendron aralioides HOM05D003427 ORTHO05D003927 9.5e-35 151.4 279 36.2
QL04p060321 Quercus lobata HOM05D003427 ORTHO05D003927 1.6e-34 150.6 274 37.2
arahy.Tifrunner.gnm1.ann1.81342Q Arachis hypogaea HOM05D003427 ORTHO05D003927 2.1e-34 150.2 275 36.4
Gohir.A06G042200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 2.1e-34 150.2 278 37.4
Lj1g0010808 Lotus japonicus HOM05D003427 ORTHO05D003927 2.1e-34 150.2 276 36.6
Sabra05G0131700 Salix brachista HOM05D003427 ORTHO05D003927 2.8e-34 149.8 277 36.5
AUR62004716 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.6e-34 149.4 275 36.7
RcHm_v2.0_Chr6g0275211 Rosa chinensis HOM05D003427 ORTHO05D003927 3.6e-34 149.4 271 38.0
Aqoxy1G02472 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 6.1e-34 148.7 278 35.6
VMungo1215G1715 Vigna mungo HOM05D003427 ORTHO05D003927 6.1e-34 148.7 274 35.8
CSS0043512 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 8.0e-34 148.3 278 34.9
CSS0048113 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 8.0e-34 148.3 278 34.9
Medtr3g007470 Medicago truncatula HOM05D003427 ORTHO05D003927 1.0e-33 147.9 273 35.2
QL07p045468 Quercus lobata HOM05D003427 ORTHO05D003927 1.0e-33 147.9 274 36.5
MSTRG.1470 Avicennia marina HOM05D003427 ORTHO05D003927 1.4e-33 147.5 273 36.6
Ciclev10001037m.g Citrus clementina HOM05D003427 ORTHO05D003927 1.4e-33 147.5 274 36.5
Glyma.04G252000 Glycine max HOM05D003427 ORTHO05D003927 1.4e-33 147.5 275 35.3
Gorai.010G048400 Gossypium raimondii HOM05D003427 ORTHO05D003927 1.4e-33 147.5 278 37.1
SalBow7G0329 Salvia bowleyana HOM05D003427 ORTHO05D003927 1.8e-33 147.1 275 37.1
Rhsim06G0106600 Rhododendron simsii HOM05D003427 ORTHO05D003927 2.3e-33 146.7 271 36.9
vmacro20081 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 2.3e-33 146.7 275 37.5
MSTRG.25396 Avicennia marina HOM05D003427 ORTHO05D003927 3.0e-33 146.4 272 35.3
Gohir.D06G043200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 4.0e-33 146.0 278 36.7
Lalb_Chr23g0270941 Lupinus albus HOM05D003427 ORTHO05D003927 4.0e-33 146.0 253 34.8
RhsimUnG0120600 Rhododendron simsii HOM05D003427 ORTHO05D003927 4.0e-33 146.0 273 38.1
Ca_15210_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 5.2e-33 145.6 277 35.4
Duzib116G0521 Durio zibethinus HOM05D003427 ORTHO05D003927 5.2e-33 145.6 273 35.2
AT2G41705 Arabidopsis thaliana HOM05D003427 ORTHO05D003927 6.8e-33 145.2 277 36.8
CiPaw.05G226300 Carya illinoinensis HOM05D003427 ORTHO05D003927 6.8e-33 145.2 260 36.9
RcHm_v2.0_Chr6g0295111 Rosa chinensis HOM05D003427 ORTHO05D003927 6.8e-33 145.2 283 34.6
Hma1.2p1_0009F.1_g006290 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 8.9e-33 144.8 275 35.3
arahy.Tifrunner.gnm1.ann1.X2WTDQ Arachis hypogaea HOM05D003427 ORTHO05D003927 1.2e-32 144.4 277 35.7
EL10Ac7g18243 Beta vulgaris HOM05D003427 ORTHO05D003927 2.0e-32 143.7 280 34.6
FvH4_2g26430 Fragaria vesca HOM05D003427 ORTHO05D003927 2.0e-32 143.7 276 34.1
FAN15G0165 Fragaria x ananassa HOM05D003427 ORTHO05D003927 2.0e-32 143.7 276 33.3
FAN24G2254 Fragaria x ananassa HOM05D003427 ORTHO05D003927 2.0e-32 143.7 276 34.1
Potri.002G086800 Populus trichocarpa HOM05D003427 ORTHO05D003927 2.6e-32 143.3 277 35.7
Hma1.2p1_0009F.1_g006270 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 3.4e-32 142.9 272 36.4
Manes.18G074712 Manihot esculenta HOM05D003427 ORTHO05D003927 3.4e-32 142.9 277 36.1
Carub.0004s2398 Capsella rubella HOM05D003427 ORTHO05D003927 4.4e-32 142.5 277 35.7
COL.COLO4_38335 Corchorus olitorius HOM05D003427 ORTHO05D003927 4.4e-32 142.5 275 36.7
BolC4t28415H Brassica oleracea HOM05D003427 ORTHO05D003927 5.7e-32 142.1 277 33.9
CANSAT56G1611 Cannabis sativa HOM05D003427 ORTHO05D003927 5.7e-32 142.1 276 35.1
Lalb_Chr23g0270911 Lupinus albus HOM05D003427 ORTHO05D003927 5.7e-32 142.1 251 34.3
SalBow7G2208 Salvia bowleyana HOM05D003427 ORTHO05D003927 5.7e-32 142.1 291 35.4
BraA04t18633Z Brassica rapa HOM05D003427 ORTHO05D003927 7.5e-32 141.7 277 33.9
Cc06_g13570 Coffea canephora HOM05D003427 ORTHO05D003927 7.5e-32 141.7 273 35.2
Glyma.06G110500 Glycine max HOM05D003427 ORTHO05D003927 7.5e-32 141.7 273 35.2
A04p31750 Brassica napus HOM05D003427 ORTHO05D003927 9.8e-32 141.4 277 33.9
C04p69170 Brassica napus HOM05D003427 ORTHO05D003927 9.8e-32 141.4 277 33.6
CANSAT56G1577 Cannabis sativa HOM05D003427 ORTHO05D003927 9.8e-32 141.4 276 35.1
PSO384G4155 Papaver somniferum HOM05D003427 ORTHO05D003927 9.8e-32 141.4 283 32.9
Phvul.003G010800 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 9.8e-32 141.4 274 36.1
EL10Ac1g00015 Beta vulgaris HOM05D003427 ORTHO05D003927 2.2e-31 140.2 280 33.9
Rhsim10G0043500 Rhododendron simsii HOM05D003427 ORTHO05D003927 2.2e-31 140.2 273 35.5
BcaB06g29198 Brassica carinata HOM05D003427 ORTHO05D003927 2.8e-31 139.8 277 33.2
SGA_v2.0_scaffold52G18992 Striga asiatica HOM05D003427 ORTHO05D003927 2.8e-31 139.8 271 36.9
AL4G40010 Arabidopsis lyrata HOM05D003427 ORTHO05D003927 3.7e-31 139.4 277 35.4
CARHR136800 Cardamine hirsuta HOM05D003427 ORTHO05D003927 3.7e-31 139.4 277 35.4
Migut.C01159 Erythranthe guttata HOM05D003427 ORTHO05D003927 6.3e-31 138.7 275 34.9
Lj3g0027376 Lotus japonicus HOM05D003427 ORTHO05D003927 8.3e-31 138.3 270 34.8
Thecc.08G120400 Theobroma cacao HOM05D003427 ORTHO05D003927 3.2e-30 136.3 276 34.4
SGA_v2.0_scaffold24G10480 Striga asiatica HOM05D003427 ORTHO05D003927 4.1e-30 136.0 275 34.5
TPR.G39483 Trifolium pratense HOM05D003427 ORTHO05D003927 9.2e-30 134.8 273 35.2
Hma1.2p1_0009F.1_g006283 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 1.2e-29 134.4 273 36.3
Sp4g23950 Schrenkiella parvula HOM05D003427 ORTHO05D003927 2.0e-29 133.7 277 34.7
Lsat_1_v5_gn_3_20261 Lactuca sativa HOM05D003427 ORTHO05D003927 4.5e-29 132.5 271 34.7
BcaNung06817 Brassica carinata HOM05D003427 ORTHO05D003927 7.8e-29 131.7 272 32.7
Sc01g0001400 Simmondsia chinensis HOM05D003427 ORTHO05D003927 7.8e-29 131.7 272 33.1
TPR.G19881 Trifolium pratense HOM05D003427 ORTHO05D003927 1.3e-28 131.0 277 33.6
C04p02870 Brassica napus HOM05D003427 ORTHO05D003927 2.3e-28 130.2 281 32.0
BolC4t21927H Brassica oleracea HOM05D003427 ORTHO05D003927 2.3e-28 130.2 271 32.5
CsaV3_5G023150 Cucumis sativus L. HOM05D003427 ORTHO05D003927 2.3e-28 130.2 274 34.7
Aa31LG1G23720 Aethionema arabicum HOM05D003427 ORTHO05D003927 2.9e-28 129.8 294 33.0
HanXRQChr17g0537311 Helianthus annuus HOM05D003427 ORTHO05D003927 2.9e-28 129.8 271 33.6
BcaC02g12787 Brassica carinata HOM05D003427 ORTHO05D003927 3.9e-28 129.4 281 31.7
THA.LOC104800187 Tarenaya hassleriana HOM05D003427 ORTHO05D003927 6.6e-28 128.6 277 36.5
VMungo1309G2531 Vigna mungo HOM05D003427 ORTHO05D003927 6.6e-28 128.6 255 33.7
A05p02420 Brassica napus HOM05D003427 ORTHO05D003927 1.9e-27 127.1 271 32.1
BraA05t19236Z Brassica rapa HOM05D003427 ORTHO05D003927 1.9e-27 127.1 271 32.1
ECA246G0604 Erigeron canadensis HOM05D003427 ORTHO05D003927 2.5e-27 126.7 271 32.5
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 3.3e-27 126.3 272 32.0
Sed0011022 Sechium edule HOM05D003427 ORTHO05D003927 4.3e-27 125.9 274 34.3
Medtr3g072840 Medicago truncatula HOM05D003427 ORTHO05D003927 5.6e-27 125.6 275 34.5
Medtr3g072830 Medicago truncatula HOM05D003427 ORTHO05D003927 9.5e-27 124.8 278 33.8
Hund27042 Selenicereus undatus HOM05D003427 ORTHO05D003927 9.5e-27 124.8 273 32.6
ClCG03G009520 Citrullus lanatus HOM05D003427 ORTHO05D003927 1.6e-26 124.0 273 33.3
MELO3C003029.2 Cucumis melo HOM05D003427 ORTHO05D003927 1.6e-26 124.0 274 33.9
Thhalv10016628m.g Eutrema salsugineum HOM05D003427 ORTHO05D003927 3.6e-26 122.9 276 33.0
Ca_14032_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 6.1e-26 122.1 257 34.2
Eucgr.F04372 Eucalyptus grandis HOM05D003427 ORTHO05D003927 6.8e-25 118.6 237 35.0
Hma1.2p1_0009F.1_g006310 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 7.5e-24 115.2 181 39.8
MD05G1028300 Malus domestica HOM05D003427 ORTHO05D003927 1.3e-23 114.4 201 39.3
BcaC02g07297 Brassica carinata HOM05D003427 ORTHO05D003927 6.4e-23 112.1 204 34.3
arahy.Tifrunner.gnm1.ann1.T4K93Z Arachis hypogaea HOM05D003427 ORTHO05D003927 9.2e-22 108.2 120 46.7
arahy.Tifrunner.gnm1.ann1.WPHY5E Arachis hypogaea HOM05D003427 ORTHO05D003927 9.2e-22 108.2 120 47.5
arahy.Tifrunner.gnm1.ann1.1IHI4J Arachis hypogaea HOM05D003427 ORTHO05D003927 3.5e-21 106.3 120 45.8
arahy.Tifrunner.gnm1.ann1.R476QE Arachis hypogaea HOM05D003427 ORTHO05D003927 3.5e-21 106.3 120 45.8
Oeu050892.2 Olea europaea HOM05D003427 ORTHO05D003927 7.8e-21 105.1 242 33.9
vmacro12551 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 7.8e-21 105.1 176 40.3
Zm00001eb390680 Zea mays HOM05D003427 ORTHO05D003927 1.5e-19 100.9 277 29.6
Os10g0567000 Oryza sativa ssp. japonica HOM05D003427 ORTHO05D003927 1.1e-17 94.7 279 29.4
HPP92_012126 Vanilla planifolia HOM05D003427 ORTHO05D003927 1.1e-17 94.7 277 30.0
ATR0807G044 Amborella trichopoda HOM05D003427 ORTHO05D003927 2.3e-17 93.6 267 29.6
HPP92_012116 Vanilla planifolia HOM05D003427 ORTHO05D003927 3.4e-16 89.7 262 29.4
MD08G1121700 Malus domestica HOM05D003427 ORTHO05D003927 1.3e-15 87.8 265 28.3
Lj4A597G14 Lonicera japonica HOM05D003427 ORTHO05D003927 4.9e-15 85.9 90 53.3
MD15G1354200 Malus domestica HOM05D003427 ORTHO05D003927 1.1e-14 84.7 107 43.9
Atru.chr13.1350 Acer truncatum HOM05D003427 ORTHO05D003927 2.4e-14 83.6 98 46.9
unitig_32.g11457 Utricularia gibba HOM05D003427 ORTHO05D003927 2.4e-14 83.6 120 41.7
AagrBONN_evm.TU.Sc2ySwM_117.415 Anthoceros agrestis HOM05D003427 ORTHO05D003927 5.4e-14 82.4 274 24.8
Duzib093G1044 Durio zibethinus HOM05D003427 ORTHO05D003927 5.4e-14 82.4 228 30.7
Psat5g133440 Pisum sativum HOM05D003427 ORTHO05D003927 1.2e-13 81.3 185 30.8
SEGI_02547 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 1.2e-13 81.3 272 25.0
SEGI_06352 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 1.2e-13 81.3 281 26.0
Cpa.g.sc36.19 Carica papaya HOM05D003427 ORTHO05D003927 2.1e-13 80.5 186 31.2
Psat5g229600 Pisum sativum HOM05D003427 ORTHO05D003927 2.1e-13 80.5 185 31.4
vmacro05626 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 4.6e-13 79.3 61 60.7
Pp3c27_680 Physcomitrium patens HOM05D003427 ORTHO05D003927 8.6e-12 75.1 266 26.7
Aqoxy1G02473 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 1.9e-11 73.9 207 27.5
Mapoly0005s0025 Marchantia polymorpha HOM05D003427 ORTHO05D003927 3.3e-11 73.2 267 24.3
MSTRG.1469 Avicennia marina HOM05D003427 ORTHO05D003927 1.6e-10 70.9 184 29.9
MD16G1151600 Malus domestica HOM05D003427 ORTHO05D003927 3.6e-10 69.7 60 56.7
Ah.05g172210 Amaranthus hybridus HOM05D003427 ORTHO05D003927 1.4e-09 67.8 57 56.1
Migut.C01160 Erythranthe guttata HOM05D003427 ORTHO05D003927 2.3e-09 67.0 55 63.6
Pp3c6_15270 Physcomitrium patens HOM05D003427 ORTHO05D003927 5.2e-09 65.9 267 24.0
MD08G1170500 Malus domestica HOM05D003427 ORTHO05D003927 3.4e-08 63.2 195 31.3
ATR0850G001 Amborella trichopoda HOM05D003427 ORTHO05D003927 7.6e-08 62.0 60 46.7
MD08G1168800 Malus domestica HOM05D003427 ORTHO05D003927 1.9e-06 57.4 163 29.4
SEGI_10482 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 3.2e-06 56.6 253 23.3


User provided reference genes

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